RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 Q6Q795 121 aa12.1□□□□□ -0.47
SPNS3-204ENST00000575194 LINC00643Q86TS7 51 aa12.09□□□□□ -0.47
SPNS3-204ENST00000575194 SDIM1Q6ZPB5 146 aa12.08□□□□□ -0.47
SPNS3-204ENST00000575194 LINC00528Q8N1L1 170 aa12.08□□□□□ -0.47
SPNS3-204ENST00000575194 PRYO14603 147 aa12.08□□□□□ -0.48
SPNS3-204ENST00000575194 CCKP06307 115 aa12.07□□□□□ -0.48
SPNS3-204ENST00000575194 LAMTOR3Q9UHA4 124 aa12.06□□□□□ -0.48
SPNS3-204ENST00000575194 NBDYA0A0U1RRE5 68 aa12.06□□□□□ -0.48
SPNS3-204ENST00000575194 PKIGQ9Y2B9 76 aa12.06□□□□□ -0.48
SPNS3-204ENST00000575194 A0A1B0GV72 72 aa12.05□□□□□ -0.48
SPNS3-204ENST00000575194 KMT2AQ03164 3969 aa12.05□□□□□ -0.48
SPNS3-204ENST00000575194 TRBV7-7A0A0K0K1E9 115 aa12.04□□□□□ -0.48
SPNS3-204ENST00000575194 RBM3P98179 157 aaKnown RBP12.04□□□□□ -0.48
SPNS3-204ENST00000575194 SMCR5Q8TEV8 140 aa12.03□□□□□ -0.48
SPNS3-204ENST00000575194 IGLV1-50A0A075B6I6 118 aa12.03□□□□□ -0.48
SPNS3-204ENST00000575194 FAM168BA1KXE4 195 aa12.03□□□□□ -0.48
SPNS3-204ENST00000575194 ALMS1Q8TCU4 4167 aa12.02□□□□□ -0.48
SPNS3-204ENST00000575194 LOC110117498A0A087WWA1 95 aa12.02□□□□□ -0.49
SPNS3-204ENST00000575194 FAM19A5Q7Z5A7 132 aaPredicted RBP12.02□□□□□ -0.49
SPNS3-204ENST00000575194 MRPL55Q7Z7F7 128 aaKnown RBP12.02□□□□□ -0.49
SPNS3-204ENST00000575194 IMUPQ9GZP8 106 aa12.02□□□□□ -0.49
SPNS3-204ENST00000575194 C16orf90A8MZG2 172 aa12.01□□□□□ -0.49
SPNS3-204ENST00000575194 PDE6GP18545 87 aa12.01□□□□□ -0.49
SPNS3-204ENST00000575194 LINC00476Q8WZB0 136 aa12.01□□□□□ -0.49
SPNS3-204ENST00000575194 DHRS4-AS1Q9P1J3 65 aa12□□□□□ -0.49
SPNS3-204ENST00000575194 ETDCA0A1B0GVM5 59 aa11.99□□□□□ -0.49
SPNS3-204ENST00000575194 DSCR8Q96T75 97 aa11.99□□□□□ -0.49
SPNS3-204ENST00000575194 RPL37AP8A6NKH3 93 aa11.98□□□□□ -0.49
SPNS3-204ENST00000575194 LY6G6CO95867 125 aa11.98□□□□□ -0.49
SPNS3-204ENST00000575194 SPRR1AP35321 89 aa11.98□□□□□ -0.49
SPNS3-204ENST00000575194 Q6ZRX8 168 aa11.97□□□□□ -0.49
SPNS3-204ENST00000575194 KRTAP7-1Q8IUC3 87 aa11.97□□□□□ -0.49
SPNS3-204ENST00000575194 A0A096LNI7 61 aa11.97□□□□□ -0.49
SPNS3-204ENST00000575194 Q6ZQT0 140 aa11.97□□□□□ -0.49
SPNS3-204ENST00000575194 LINC00846Q9NV44 126 aa11.97□□□□□ -0.49
SPNS3-204ENST00000575194 B5MCH6 92 aa11.96□□□□□ -0.49
SPNS3-204ENST00000575194 SACSQ9NZJ4 4579 aa11.96□□□□□ -0.5
SPNS3-204ENST00000575194 DNAH6Q9C0G6 4158 aa11.95□□□□□ -0.5
SPNS3-204ENST00000575194 KRTAP4-16G5E9R7 235 aaPredicted RBP11.95□□□□□ -0.5
SPNS3-204ENST00000575194 Q6JHZ5 121 aa11.95□□□□□ -0.5
SPNS3-204ENST00000575194 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.94□□□□□ -0.5
SPNS3-204ENST00000575194 NDUFV3P56181 108 aaKnown RBP11.94□□□□□ -0.5
SPNS3-204ENST00000575194 LRCOL1A6NCL2 159 aa11.94□□□□□ -0.5
SPNS3-204ENST00000575194 KMT2CQ8NEZ4 4911 aaKnown RBP11.93□□□□□ -0.5
SPNS3-204ENST00000575194 Q6ZRN7 208 aaPredicted RBP11.93□□□□□ -0.5
SPNS3-204ENST00000575194 HYDINQ4G0P3 5121 aa11.93□□□□□ -0.5
SPNS3-204ENST00000575194 IGKV2-24A0A0C4DH68 120 aa11.92□□□□□ -0.5
SPNS3-204ENST00000575194 REG3GQ6UW15 175 aa11.92□□□□□ -0.5
SPNS3-204ENST00000575194 ATP5EP2Q5VTU8 51 aa11.91□□□□□ -0.5
SPNS3-204ENST00000575194 Q6ZR54 194 aa11.91□□□□□ -0.5
SPNS3-204ENST00000575194 ANAPC13Q9BS18 74 aa11.91□□□□□ -0.5
SPNS3-204ENST00000575194 DNAH2Q9P225 4427 aa11.91□□□□□ -0.5
SPNS3-204ENST00000575194 DNAH10Q8IVF4 4471 aa11.9□□□□□ -0.5
SPNS3-204ENST00000575194 TRBV7-4A0A0J9YYF1 115 aa11.9□□□□□ -0.5
SPNS3-204ENST00000575194 C9orf163Q8N9P6 203 aa11.9□□□□□ -0.5
SPNS3-204ENST00000575194 UBL5Q9BZL1 73 aa11.9□□□□□ -0.5
SPNS3-204ENST00000575194 LINC00474Q9P2X8 69 aa11.89□□□□□ -0.51
SPNS3-204ENST00000575194 LCE6AA0A183 80 aa11.89□□□□□ -0.51
SPNS3-204ENST00000575194 M0R2N4 97 aa11.88□□□□□ -0.51
SPNS3-204ENST00000575194 Q9BRP9 147 aa11.88□□□□□ -0.51
SPNS3-204ENST00000575194 A0A1W2PNN7 141 aa11.86□□□□□ -0.51
SPNS3-204ENST00000575194 UBE2BP63146 152 aa11.85□□□□□ -0.51
SPNS3-204ENST00000575194 DEFB105AQ8NG35 78 aa11.84□□□□□ -0.51
SPNS3-204ENST00000575194 Q8N377 158 aa11.83□□□□□ -0.52
SPNS3-204ENST00000575194 IGLV5-48A0A075B6I7 105 aa11.83□□□□□ -0.52
SPNS3-204ENST00000575194 IGKV3D-7A0A0C4DH55 119 aa11.83□□□□□ -0.52
SPNS3-204ENST00000575194 FAM236AA0A1B0GUQ0 79 aa11.82□□□□□ -0.52
SPNS3-204ENST00000575194 FAM236BA0A1B0GV22 79 aa11.82□□□□□ -0.52
SPNS3-204ENST00000575194 LINC01547P58512 204 aaPredicted RBP11.82□□□□□ -0.52
SPNS3-204ENST00000575194 RYR2Q92736 4967 aa11.81□□□□□ -0.52
SPNS3-204ENST00000575194 CHTF8P0CG12 524 aa11.8□□□□□ -0.52
SPNS3-204ENST00000575194 A0A087WTM6 91 aa11.79□□□□□ -0.52
SPNS3-204ENST00000575194 FAM19A1Q7Z5A9 133 aa11.79□□□□□ -0.52
SPNS3-204ENST00000575194 FRAS1Q86XX4 4008 aa11.78□□□□□ -0.52
SPNS3-204ENST00000575194 C1orf134Q5TEV5 83 aa11.77□□□□□ -0.53
SPNS3-204ENST00000575194 PHF5AQ7RTV0 110 aaKnown RBP11.76□□□□□ -0.53
SPNS3-204ENST00000575194 ST20-AS1Q8NBB2 130 aa11.76□□□□□ -0.53
SPNS3-204ENST00000575194 DNAH17Q9UFH2 4485 aa11.76□□□□□ -0.53
SPNS3-204ENST00000575194 ERC2-IT1O76042 136 aa11.75□□□□□ -0.53
SPNS3-204ENST00000575194 Q6ZVQ6 151 aa11.75□□□□□ -0.53
SPNS3-204ENST00000575194 H0Y9J4 135 aa11.74□□□□□ -0.53
SPNS3-204ENST00000575194 HIST1H4AP62805 103 aaKnown RBP11.74□□□□□ -0.53
SPNS3-204ENST00000575194 A0A1B0GW54 56 aa11.73□□□□□ -0.53
SPNS3-204ENST00000575194 PRLHP81277 87 aa11.72□□□□□ -0.53
SPNS3-204ENST00000575194 TNP2Q05952 138 aa11.72□□□□□ -0.53
SPNS3-204ENST00000575194 SPACA4Q8TDM5 124 aa11.72□□□□□ -0.53
SPNS3-204ENST00000575194 RYR3Q15413 4870 aa11.71□□□□□ -0.53
SPNS3-204ENST00000575194 ATOX1O00244 68 aa11.71□□□□□ -0.54
SPNS3-204ENST00000575194 CXCL6P80162 114 aa11.71□□□□□ -0.54
SPNS3-204ENST00000575194 DPH3Q96FX2 82 aa11.71□□□□□ -0.54
SPNS3-204ENST00000575194 F8WEM9 126 aa11.7□□□□□ -0.54
SPNS3-204ENST00000575194 RTL8CO15255 209 aa11.7□□□□□ -0.54
SPNS3-204ENST00000575194 FUSP35637 526 aaKnown RBP eCLIP11.7□□□□□ -0.54
SPNS3-204ENST00000575194 HAMPP81172 84 aa11.69□□□□□ -0.54
SPNS3-204ENST00000575194 C3orf22Q8N5N4 141 aa11.69□□□□□ -0.54
SPNS3-204ENST00000575194 FAT2Q9NYQ8 4349 aa11.69□□□□□ -0.54
SPNS3-204ENST00000575194 C1orf137Q5JT78 98 aa11.69□□□□□ -0.54
SPNS3-204ENST00000575194 HIGD2AQ9BW72 106 aa11.69□□□□□ -0.54
SPNS3-204ENST00000575194 EPM2AB3EWF7 344 aa11.68□□□□□ -0.54
SPNS3-204ENST00000575194 UBE2AP49459 152 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms