RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 GAGE2BQ13066 116 aa11.15□□□□□ -0.62
RPAIN-208ENST00000571043 OBSCN-AS1Q96MR7 158 aa11.15□□□□□ -0.62
RPAIN-208ENST00000571043 SIGMAR1Q99720 223 aa11.15□□□□□ -0.62
RPAIN-208ENST00000571043 FAT2Q9NYQ8 4349 aa11.15□□□□□ -0.63
RPAIN-208ENST00000571043 RYR3Q15413 4870 aa11.15□□□□□ -0.63
RPAIN-208ENST00000571043 TMEM256-PLSCR3K7ERE1 68 aa11.14□□□□□ -0.63
RPAIN-208ENST00000571043 C7orf33Q8WU49 177 aa11.14□□□□□ -0.63
RPAIN-208ENST00000571043 KCNQ1DNQ9H478 68 aa11.14□□□□□ -0.63
RPAIN-208ENST00000571043 H3BQ85 93 aa11.13□□□□□ -0.63
RPAIN-208ENST00000571043 RTL8CO15255 209 aa11.12□□□□□ -0.63
RPAIN-208ENST00000571043 ACYP1P07311 99 aa11.11□□□□□ -0.63
RPAIN-208ENST00000571043 LRCOL1A6NCL2 159 aa11.1□□□□□ -0.63
RPAIN-208ENST00000571043 C16orf90A8MZG2 172 aa11.09□□□□□ -0.63
RPAIN-208ENST00000571043 FAM168BA1KXE4 195 aa11.09□□□□□ -0.63
RPAIN-208ENST00000571043 JMJD7-PLA2G4BH0Y9G9 81 aa11.09□□□□□ -0.63
RPAIN-208ENST00000571043 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.09□□□□□ -0.63
RPAIN-208ENST00000571043 KRTAP7-1Q8IUC3 87 aa11.09□□□□□ -0.63
RPAIN-208ENST00000571043 LINC00528Q8N1L1 170 aa11.09□□□□□ -0.63
RPAIN-208ENST00000571043 DNAH11Q96DT5 4516 aa11.08□□□□□ -0.64
RPAIN-208ENST00000571043 HECTD4Q9Y4D8 3996 aa11.08□□□□□ -0.64
RPAIN-208ENST00000571043 PRYO14603 147 aa11.08□□□□□ -0.64
RPAIN-208ENST00000571043 GHRHP01286 108 aa11.08□□□□□ -0.64
RPAIN-208ENST00000571043 PKIGQ9Y2B9 76 aa11.08□□□□□ -0.64
RPAIN-208ENST00000571043 IGLV1-50A0A075B6I6 118 aa11.07□□□□□ -0.64
RPAIN-208ENST00000571043 Q6ZQY7 126 aa11.06□□□□□ -0.64
RPAIN-208ENST00000571043 XGP55808 180 aa11.05□□□□□ -0.64
RPAIN-208ENST00000571043 MRPL55Q7Z7F7 128 aaKnown RBP11.05□□□□□ -0.64
RPAIN-208ENST00000571043 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.04□□□□□ -0.64
RPAIN-208ENST00000571043 A0A087WTM6 91 aa11.04□□□□□ -0.64
RPAIN-208ENST00000571043 A0A096LNI7 61 aa11.04□□□□□ -0.64
RPAIN-208ENST00000571043 SPRR1AP35321 89 aa11.04□□□□□ -0.64
RPAIN-208ENST00000571043 TNP2Q05952 138 aa11.04□□□□□ -0.64
RPAIN-208ENST00000571043 FAM19A5Q7Z5A7 132 aaPredicted RBP11.04□□□□□ -0.64
RPAIN-208ENST00000571043 C9orf163Q8N9P6 203 aa11.04□□□□□ -0.64
RPAIN-208ENST00000571043 C14orf132Q9NPU4 83 aa11.04□□□□□ -0.64
RPAIN-208ENST00000571043 PKD1P98161 4303 aa11.03□□□□□ -0.64
RPAIN-208ENST00000571043 MT-ATP8P03928 68 aa11.02□□□□□ -0.65
RPAIN-208ENST00000571043 SCGB1A1P11684 91 aa11.02□□□□□ -0.65
RPAIN-208ENST00000571043 LINC00336Q6ZUF6 198 aa11.02□□□□□ -0.65
RPAIN-208ENST00000571043 RPL37AP8A6NKH3 93 aa11.01□□□□□ -0.65
RPAIN-208ENST00000571043 KRTAP4-16G5E9R7 235 aaPredicted RBP11.01□□□□□ -0.65
RPAIN-208ENST00000571043 GAGE2AQ6NT46 116 aa11.01□□□□□ -0.65
RPAIN-208ENST00000571043 IGKV2-24A0A0C4DH68 120 aa10.99□□□□□ -0.65
RPAIN-208ENST00000571043 B5MCH6 92 aa10.99□□□□□ -0.65
RPAIN-208ENST00000571043 Q6ZRX8 168 aa10.99□□□□□ -0.65
RPAIN-208ENST00000571043 DHRS4-AS1Q9P1J3 65 aa10.99□□□□□ -0.65
RPAIN-208ENST00000571043 ETDCA0A1B0GVM5 59 aa10.98□□□□□ -0.65
RPAIN-208ENST00000571043 A0A1W2PNN7 141 aa10.98□□□□□ -0.65
RPAIN-208ENST00000571043 CCKP06307 115 aa10.98□□□□□ -0.65
RPAIN-208ENST00000571043 PCP4P48539 62 aa10.98□□□□□ -0.65
RPAIN-208ENST00000571043 SDIM1Q6ZPB5 146 aa10.98□□□□□ -0.65
RPAIN-208ENST00000571043 LAMTOR3Q9UHA4 124 aa10.98□□□□□ -0.65
RPAIN-208ENST00000571043 RBM3P98179 157 aaKnown RBP10.97□□□□□ -0.65
RPAIN-208ENST00000571043 LINC00474Q9P2X8 69 aa10.97□□□□□ -0.65
RPAIN-208ENST00000571043 DNAH5Q8TE73 4624 aa10.97□□□□□ -0.65
RPAIN-208ENST00000571043 REG3GQ6UW15 175 aa10.95□□□□□ -0.66
RPAIN-208ENST00000571043 LOC110117498A0A087WWA1 95 aa10.94□□□□□ -0.66
RPAIN-208ENST00000571043 A0A1B0GV72 72 aa10.94□□□□□ -0.66
RPAIN-208ENST00000571043 LINC00643Q86TS7 51 aa10.94□□□□□ -0.66
RPAIN-208ENST00000571043 PDE6GP18545 87 aa10.93□□□□□ -0.66
RPAIN-208ENST00000571043 PKHD1P08F94 4074 aa10.93□□□□□ -0.66
RPAIN-208ENST00000571043 Q9BRP9 147 aa10.92□□□□□ -0.66
RPAIN-208ENST00000571043 CHTF8P0CG12 524 aa10.91□□□□□ -0.66
RPAIN-208ENST00000571043 NDUFV3P56181 108 aaKnown RBP10.91□□□□□ -0.66
RPAIN-208ENST00000571043 SMCR5Q8TEV8 140 aa10.91□□□□□ -0.66
RPAIN-208ENST00000571043 A0A1B0GVY2 172 aa10.9□□□□□ -0.66
RPAIN-208ENST00000571043 Q6Q795 121 aa10.9□□□□□ -0.66
RPAIN-208ENST00000571043 Q6ZQT0 140 aa10.9□□□□□ -0.66
RPAIN-208ENST00000571043 DSCR8Q96T75 97 aa10.9□□□□□ -0.66
RPAIN-208ENST00000571043 KRTAP10-2P60368 255 aa10.89□□□□□ -0.67
RPAIN-208ENST00000571043 C21orf62-AS1Q17RA5 79 aa10.89□□□□□ -0.67
RPAIN-208ENST00000571043 LINC00846Q9NV44 126 aa10.88□□□□□ -0.67
RPAIN-208ENST00000571043 TRBV7-4A0A0J9YYF1 115 aa10.87□□□□□ -0.67
RPAIN-208ENST00000571043 TRBV7-7A0A0K0K1E9 115 aa10.87□□□□□ -0.67
RPAIN-208ENST00000571043 FUSP35637 526 aaKnown RBP eCLIP10.87□□□□□ -0.67
RPAIN-208ENST00000571043 LINC01547P58512 204 aaPredicted RBP10.87□□□□□ -0.67
RPAIN-208ENST00000571043 Q8N377 158 aa10.87□□□□□ -0.67
RPAIN-208ENST00000571043 IGLV5-52A0A0A0MRZ9 124 aa10.86□□□□□ -0.67
RPAIN-208ENST00000571043 UBE2BP63146 152 aa10.86□□□□□ -0.67
RPAIN-208ENST00000571043 PHF5AQ7RTV0 110 aaKnown RBP10.86□□□□□ -0.67
RPAIN-208ENST00000571043 DNAH8Q96JB1 4490 aa10.86□□□□□ -0.67
RPAIN-208ENST00000571043 IGLV5-48A0A075B6I7 105 aa10.85□□□□□ -0.67
RPAIN-208ENST00000571043 EPM2AB3EWF7 344 aa10.85□□□□□ -0.67
RPAIN-208ENST00000571043 SPACA4Q8TDM5 124 aa10.85□□□□□ -0.67
RPAIN-208ENST00000571043 IMUPQ9GZP8 106 aa10.85□□□□□ -0.67
RPAIN-208ENST00000571043 DYNC1H1Q14204 4646 aaKnown RBP10.84□□□□□ -0.67
RPAIN-208ENST00000571043 PANO1I0J062 215 aa10.83□□□□□ -0.68
RPAIN-208ENST00000571043 FAM19A1Q7Z5A9 133 aa10.83□□□□□ -0.68
RPAIN-208ENST00000571043 DEFB105AQ8NG35 78 aa10.83□□□□□ -0.68
RPAIN-208ENST00000571043 ERC2-IT1O76042 136 aa10.82□□□□□ -0.68
RPAIN-208ENST00000571043 LRP1BQ9NZR2 4599 aa10.82□□□□□ -0.68
RPAIN-208ENST00000571043 H0Y9J4 135 aa10.81□□□□□ -0.68
RPAIN-208ENST00000571043 Q6JHZ5 121 aa10.8□□□□□ -0.68
RPAIN-208ENST00000571043 ST20-AS1Q8NBB2 130 aa10.8□□□□□ -0.68
RPAIN-208ENST00000571043 DPH3Q96FX2 82 aa10.8□□□□□ -0.68
RPAIN-208ENST00000571043 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.8□□□□□ -0.68
RPAIN-208ENST00000571043 KRTAP11-1Q8IUC1 163 aa10.79□□□□□ -0.68
RPAIN-208ENST00000571043 PRLHP81277 87 aa10.78□□□□□ -0.68
RPAIN-208ENST00000571043 UBL5Q9BZL1 73 aa10.78□□□□□ -0.68
RPAIN-208ENST00000571043 ATP5EP2Q5VTU8 51 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms