RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 SERF1AO75920 110 aa4.75□□□□□ -1.65
CTDNEP1-203ENST00000570385 LEPROTL1O95214 131 aa4.75□□□□□ -1.65
CTDNEP1-203ENST00000570385 IGLV6-57P01721 117 aa4.75□□□□□ -1.65
CTDNEP1-203ENST00000570385 LGALS3P17931 250 aaKnown RBP4.75□□□□□ -1.65
CTDNEP1-203ENST00000570385 LORP23490 312 aaPredicted RBP4.75□□□□□ -1.65
CTDNEP1-203ENST00000570385 LINC00310P59036 64 aa4.75□□□□□ -1.65
CTDNEP1-203ENST00000570385 RPS29P62273 56 aaKnown RBP4.75□□□□□ -1.65
CTDNEP1-203ENST00000570385 HRCT1Q6UXD1 115 aa4.75□□□□□ -1.65
CTDNEP1-203ENST00000570385 SOSTDC1Q6X4U4 206 aa4.75□□□□□ -1.65
CTDNEP1-203ENST00000570385 ARL17AQ8IVW1 177 aa4.75□□□□□ -1.65
CTDNEP1-203ENST00000570385 ZNF73O43830 326 aaPredicted RBP4.74□□□□□ -1.65
CTDNEP1-203ENST00000570385 DPM2O94777 84 aa4.74□□□□□ -1.65
CTDNEP1-203ENST00000570385 TRGC2P03986 189 aa4.74□□□□□ -1.65
CTDNEP1-203ENST00000570385 HERVK_113P61574 105 aa4.74□□□□□ -1.65
CTDNEP1-203ENST00000570385 ADAMTSL4-AS1Q5T5F5 129 aa4.74□□□□□ -1.65
CTDNEP1-203ENST00000570385 C9orf92A6NGG3 77 aa4.73□□□□□ -1.65
CTDNEP1-203ENST00000570385 PLNP26678 52 aa4.73□□□□□ -1.65
CTDNEP1-203ENST00000570385 JOSD1Q15040 202 aaPredicted RBP4.73□□□□□ -1.65
CTDNEP1-203ENST00000570385 FSIP2Q5CZC0 6907 aa4.72□□□□□ -1.65
CTDNEP1-203ENST00000570385 A0A0J9YXY3 114 aa4.72□□□□□ -1.65
CTDNEP1-203ENST00000570385 NDUFC2O95298 119 aa4.72□□□□□ -1.65
CTDNEP1-203ENST00000570385 IGKCP01834 107 aa4.72□□□□□ -1.65
CTDNEP1-203ENST00000570385 PCOTHQ58A44 107 aa4.72□□□□□ -1.65
CTDNEP1-203ENST00000570385 NMUP48645 174 aa4.71□□□□□ -1.66
CTDNEP1-203ENST00000570385 OR13C6PQ8NH95 151 aa4.71□□□□□ -1.66
CTDNEP1-203ENST00000570385 HSPB8Q9UJY1 196 aa4.71□□□□□ -1.66
CTDNEP1-203ENST00000570385 IGLV8-61A0A075B6I0 122 aa4.7□□□□□ -1.66
CTDNEP1-203ENST00000570385 HINT1P49773 126 aaPredicted RBP4.7□□□□□ -1.66
CTDNEP1-203ENST00000570385 CRCT1Q9UGL9 99 aa4.7□□□□□ -1.66
CTDNEP1-203ENST00000570385 KRTAP19-2Q3LHN2 52 aa4.69□□□□□ -1.66
CTDNEP1-203ENST00000570385 DEFB105AQ8NG35 78 aa4.69□□□□□ -1.66
CTDNEP1-203ENST00000570385 E9PLD3 99 aa4.68□□□□□ -1.66
CTDNEP1-203ENST00000570385 H7C2G1 150 aa4.68□□□□□ -1.66
CTDNEP1-203ENST00000570385 MT1HP80294 61 aa4.68□□□□□ -1.66
CTDNEP1-203ENST00000570385 Q1RN00 199 aa4.68□□□□□ -1.66
CTDNEP1-203ENST00000570385 LINC00308Q8TCZ7 52 aa4.68□□□□□ -1.66
CTDNEP1-203ENST00000570385 SPRR1BP22528 89 aa4.67□□□□□ -1.66
CTDNEP1-203ENST00000570385 LITAFQ99732 161 aa4.67□□□□□ -1.66
CTDNEP1-203ENST00000570385 LIMD2Q9BT23 127 aa4.67□□□□□ -1.66
CTDNEP1-203ENST00000570385 LAMTOR3Q9UHA4 124 aa4.67□□□□□ -1.66
CTDNEP1-203ENST00000570385 A0A0G2JQZ4 141 aa4.66□□□□□ -1.66
CTDNEP1-203ENST00000570385 C5orf52A6NGY3 159 aa4.66□□□□□ -1.66
CTDNEP1-203ENST00000570385 TAL2Q16559 108 aa4.66□□□□□ -1.66
CTDNEP1-203ENST00000570385 SLC25A34Q6PIV7 304 aa4.66□□□□□ -1.66
CTDNEP1-203ENST00000570385 TTTY13Q9BZ97 58 aa4.66□□□□□ -1.66
CTDNEP1-203ENST00000570385 SPANXCQ9NY87 97 aa4.66□□□□□ -1.66
CTDNEP1-203ENST00000570385 DHRS4-AS1Q9P1J3 65 aa4.66□□□□□ -1.66
CTDNEP1-203ENST00000570385 COX7BP24311 80 aa4.65□□□□□ -1.67
CTDNEP1-203ENST00000570385 C6orf99Q4VX62 202 aa4.65□□□□□ -1.67
CTDNEP1-203ENST00000570385 CBY1Q9Y3M2 126 aa4.65□□□□□ -1.67
CTDNEP1-203ENST00000570385 ZNF815PA8K554 130 aa4.64□□□□□ -1.67
CTDNEP1-203ENST00000570385 SYS1-DBNDD2H3BUS1 97 aa4.64□□□□□ -1.67
CTDNEP1-203ENST00000570385 SPANXDQ9BXN6 97 aa4.64□□□□□ -1.67
CTDNEP1-203ENST00000570385 COLCA2A8K830 154 aa4.63□□□□□ -1.67
CTDNEP1-203ENST00000570385 ELOF1P60002 83 aaKnown RBP4.63□□□□□ -1.67
CTDNEP1-203ENST00000570385 PRO1933Q9H354 126 aa4.63□□□□□ -1.67
CTDNEP1-203ENST00000570385 TEX49A0A1B0GTD5 131 aa4.62□□□□□ -1.67
CTDNEP1-203ENST00000570385 TIMM17BO60830 172 aa4.62□□□□□ -1.67
CTDNEP1-203ENST00000570385 SLC7A5P1Q8MH63 180 aa4.62□□□□□ -1.67
CTDNEP1-203ENST00000570385 M0R2T5 61 aa4.61□□□□□ -1.67
CTDNEP1-203ENST00000570385 CFC1BP0CG36 223 aa4.61□□□□□ -1.67
CTDNEP1-203ENST00000570385 AKR1D1P51857 326 aa4.61□□□□□ -1.67
CTDNEP1-203ENST00000570385 CD164Q04900 197 aa4.61□□□□□ -1.67
CTDNEP1-203ENST00000570385 C1orf195Q5TG92 126 aa4.61□□□□□ -1.67
CTDNEP1-203ENST00000570385 SMIM29Q86T20 159 aa4.61□□□□□ -1.67
CTDNEP1-203ENST00000570385 A6NDN8 102 aa4.6□□□□□ -1.67
CTDNEP1-203ENST00000570385 KRTAP10-6P60371 365 aaPredicted RBP4.6□□□□□ -1.67
CTDNEP1-203ENST00000570385 LINC01545Q5VT33 79 aa4.6□□□□□ -1.67
CTDNEP1-203ENST00000570385 LINC00518Q8N0U6 118 aa4.6□□□□□ -1.67
CTDNEP1-203ENST00000570385 HIST1H2BKO60814 126 aa4.59□□□□□ -1.67
CTDNEP1-203ENST00000570385 HIST1H2BJP06899 126 aa4.59□□□□□ -1.67
CTDNEP1-203ENST00000570385 HIST1H2BOP23527 126 aa4.59□□□□□ -1.67
CTDNEP1-203ENST00000570385 HIST1H2BBP33778 126 aa4.59□□□□□ -1.67
CTDNEP1-203ENST00000570385 HIST1H2BDP58876 126 aa4.59□□□□□ -1.67
CTDNEP1-203ENST00000570385 HIST1H2BCP62807 126 aa4.59□□□□□ -1.67
CTDNEP1-203ENST00000570385 HIST2H2BEQ16778 126 aa4.59□□□□□ -1.67
CTDNEP1-203ENST00000570385 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.59□□□□□ -1.67
CTDNEP1-203ENST00000570385 PET117Q6UWS5 81 aa4.59□□□□□ -1.67
CTDNEP1-203ENST00000570385 SCGB1D4Q6XE38 83 aa4.59□□□□□ -1.67
CTDNEP1-203ENST00000570385 COX6B2Q6YFQ2 88 aa4.59□□□□□ -1.67
CTDNEP1-203ENST00000570385 HIST1H2BHQ93079 126 aa4.59□□□□□ -1.67
CTDNEP1-203ENST00000570385 HIST1H2BNQ99877 126 aa4.59□□□□□ -1.67
CTDNEP1-203ENST00000570385 HIST1H2BMQ99879 126 aa4.59□□□□□ -1.67
CTDNEP1-203ENST00000570385 C3orf79P0CE67 100 aa4.58□□□□□ -1.68
CTDNEP1-203ENST00000570385 RPL37P61927 97 aaKnown RBP4.58□□□□□ -1.68
CTDNEP1-203ENST00000570385 IGLV5-48A0A075B6I7 105 aa4.57□□□□□ -1.68
CTDNEP1-203ENST00000570385 A0A1B0GWB2 263 aa4.57□□□□□ -1.68
CTDNEP1-203ENST00000570385 KRTDAPP60985 99 aa4.57□□□□□ -1.68
CTDNEP1-203ENST00000570385 Q5XG85 94 aa4.57□□□□□ -1.68
CTDNEP1-203ENST00000570385 TRBV7-6A0A0J9YX20 115 aa4.56□□□□□ -1.68
CTDNEP1-203ENST00000570385 ANKRD39Q53RE8 183 aa4.56□□□□□ -1.68
CTDNEP1-203ENST00000570385 MUSTN1Q8IVN3 82 aa4.56□□□□□ -1.68
CTDNEP1-203ENST00000570385 ATOH7Q8N100 152 aa4.56□□□□□ -1.68
CTDNEP1-203ENST00000570385 PCP2Q8IVA1 136 aa4.55□□□□□ -1.68
CTDNEP1-203ENST00000570385 SMIM11BQ8TCY0 68 aa4.55□□□□□ -1.68
CTDNEP1-203ENST00000570385 TCL1BO95988 128 aa4.53□□□□□ -1.68
CTDNEP1-203ENST00000570385 IFITM1P13164 125 aa4.53□□□□□ -1.68
CTDNEP1-203ENST00000570385 Q6Q795 121 aa4.53□□□□□ -1.68
CTDNEP1-203ENST00000570385 A4D1N5 150 aa4.52□□□□□ -1.69
CTDNEP1-203ENST00000570385 F8WEM9 126 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms