RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 hADV29S1A0JD25 119 aa4.53□□□□□ -1.68
SMG1-215ENST00000568239 C16orf90A8MZG2 172 aa4.53□□□□□ -1.68
SMG1-215ENST00000568239 CHTF8P0CG12 524 aa4.53□□□□□ -1.68
SMG1-215ENST00000568239 ORMDL1Q9P0S3 153 aa4.53□□□□□ -1.68
SMG1-215ENST00000568239 COX7BP24311 80 aa4.53□□□□□ -1.68
SMG1-215ENST00000568239 C1orf134Q5TEV5 83 aa4.53□□□□□ -1.68
SMG1-215ENST00000568239 LINC00575Q6W349 94 aa4.53□□□□□ -1.68
SMG1-215ENST00000568239 Q6ZR54 194 aa4.53□□□□□ -1.68
SMG1-215ENST00000568239 A0A087WTM6 91 aa4.53□□□□□ -1.68
SMG1-215ENST00000568239 MRPL55Q7Z7F7 128 aaKnown RBP4.53□□□□□ -1.68
SMG1-215ENST00000568239 LINC00476Q8WZB0 136 aa4.53□□□□□ -1.68
SMG1-215ENST00000568239 LINC00167Q96N53 147 aa4.53□□□□□ -1.68
SMG1-215ENST00000568239 KRTAP7-1Q8IUC3 87 aa4.52□□□□□ -1.69
SMG1-215ENST00000568239 C9orf163Q8N9P6 203 aa4.52□□□□□ -1.69
SMG1-215ENST00000568239 PLA2G2DQ9UNK4 145 aa4.52□□□□□ -1.69
SMG1-215ENST00000568239 A0A1B0GX51 115 aa4.51□□□□□ -1.69
SMG1-215ENST00000568239 A0A1W2PNN7 141 aa4.51□□□□□ -1.69
SMG1-215ENST00000568239 Q6ZQY7 126 aa4.51□□□□□ -1.69
SMG1-215ENST00000568239 ELOF1P60002 83 aaKnown RBP4.51□□□□□ -1.69
SMG1-215ENST00000568239 KCNQ1DNQ9H478 68 aa4.51□□□□□ -1.69
SMG1-215ENST00000568239 DNAH2Q9P225 4427 aa4.51□□□□□ -1.69
SMG1-215ENST00000568239 IGLV1-50A0A075B6I6 118 aa4.5□□□□□ -1.69
SMG1-215ENST00000568239 C3orf84H3BNL1 204 aa4.5□□□□□ -1.69
SMG1-215ENST00000568239 SCGB1A1P11684 91 aa4.5□□□□□ -1.69
SMG1-215ENST00000568239 LINC01600Q96MT4 127 aa4.5□□□□□ -1.69
SMG1-215ENST00000568239 IGLV5-37A0A075B6J1 123 aa4.5□□□□□ -1.69
SMG1-215ENST00000568239 ETDCA0A1B0GVM5 59 aa4.5□□□□□ -1.69
SMG1-215ENST00000568239 TMEM256-PLSCR3K7ERE1 68 aa4.5□□□□□ -1.69
SMG1-215ENST00000568239 LCE2CQ5TA81 110 aa4.5□□□□□ -1.69
SMG1-215ENST00000568239 SDIM1Q6ZPB5 146 aa4.5□□□□□ -1.69
SMG1-215ENST00000568239 UBE2BP63146 152 aa4.49□□□□□ -1.69
SMG1-215ENST00000568239 RTL8CO15255 209 aa4.49□□□□□ -1.69
SMG1-215ENST00000568239 SMIM20Q8N5G0 67 aa4.49□□□□□ -1.69
SMG1-215ENST00000568239 C14orf132Q9NPU4 83 aa4.49□□□□□ -1.69
SMG1-215ENST00000568239 LAMTOR3Q9UHA4 124 aa4.49□□□□□ -1.69
SMG1-215ENST00000568239 V9GYY9 64 aa4.49□□□□□ -1.69
SMG1-215ENST00000568239 TRBV7-6A0A0J9YX20 115 aa4.48□□□□□ -1.69
SMG1-215ENST00000568239 PHF5AQ7RTV0 110 aaKnown RBP4.48□□□□□ -1.69
SMG1-215ENST00000568239 PKIGQ9Y2B9 76 aa4.48□□□□□ -1.69
SMG1-215ENST00000568239 PANO1I0J062 215 aa4.48□□□□□ -1.69
SMG1-215ENST00000568239 PRYO14603 147 aa4.48□□□□□ -1.69
SMG1-215ENST00000568239 REG3GQ6UW15 175 aa4.48□□□□□ -1.69
SMG1-215ENST00000568239 DEFB105AQ8NG35 78 aa4.48□□□□□ -1.69
SMG1-215ENST00000568239 IGLV5-52A0A0A0MRZ9 124 aa4.47□□□□□ -1.69
SMG1-215ENST00000568239 INAFM2P0DMQ5 153 aa4.47□□□□□ -1.69
SMG1-215ENST00000568239 LINC00474Q9P2X8 69 aa4.47□□□□□ -1.69
SMG1-215ENST00000568239 GAGE2AQ6NT46 116 aa4.47□□□□□ -1.69
SMG1-215ENST00000568239 SS18L2Q9UHA2 77 aa4.47□□□□□ -1.69
SMG1-215ENST00000568239 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.47□□□□□ -1.69
SMG1-215ENST00000568239 Q6ZRX8 168 aa4.47□□□□□ -1.69
SMG1-215ENST00000568239 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.47□□□□□ -1.69
SMG1-215ENST00000568239 B5MCH6 92 aa4.46□□□□□ -1.7
SMG1-215ENST00000568239 FAM19A1Q7Z5A9 133 aa4.46□□□□□ -1.7
SMG1-215ENST00000568239 HYDINQ4G0P3 5121 aa4.45□□□□□ -1.7
SMG1-215ENST00000568239 JMJD7-PLA2G4BH0Y9G9 81 aa4.45□□□□□ -1.7
SMG1-215ENST00000568239 SPRR1AP35321 89 aa4.45□□□□□ -1.7
SMG1-215ENST00000568239 PRLHP81277 87 aa4.45□□□□□ -1.7
SMG1-215ENST00000568239 KRTAP4-16G5E9R7 235 aaPredicted RBP4.45□□□□□ -1.7
SMG1-215ENST00000568239 Q9BRP9 147 aa4.45□□□□□ -1.7
SMG1-215ENST00000568239 RBM3P98179 157 aaKnown RBP4.44□□□□□ -1.7
SMG1-215ENST00000568239 HIGD2AQ9BW72 106 aa4.44□□□□□ -1.7
SMG1-215ENST00000568239 DHRS4-AS1Q9P1J3 65 aa4.44□□□□□ -1.7
SMG1-215ENST00000568239 H3BS24 57 aa4.44□□□□□ -1.7
SMG1-215ENST00000568239 KRTAP11-1Q8IUC1 163 aa4.44□□□□□ -1.7
SMG1-215ENST00000568239 SPACA4Q8TDM5 124 aa4.44□□□□□ -1.7
SMG1-215ENST00000568239 ST20-AS1Q8NBB2 130 aa4.44□□□□□ -1.7
SMG1-215ENST00000568239 SIGMAR1Q99720 223 aa4.44□□□□□ -1.7
SMG1-215ENST00000568239 ERC2-IT1O76042 136 aa4.43□□□□□ -1.7
SMG1-215ENST00000568239 DNAH17Q9UFH2 4485 aa4.43□□□□□ -1.7
SMG1-215ENST00000568239 H3BQ85 93 aa4.43□□□□□ -1.7
SMG1-215ENST00000568239 OBSCN-AS1Q96MR7 158 aa4.43□□□□□ -1.7
SMG1-215ENST00000568239 DSCR8Q96T75 97 aa4.43□□□□□ -1.7
SMG1-215ENST00000568239 XGP55808 180 aa4.42□□□□□ -1.7
SMG1-215ENST00000568239 NDUFV3P56181 108 aaKnown RBP4.42□□□□□ -1.7
SMG1-215ENST00000568239 KRTAP10-2P60368 255 aa4.42□□□□□ -1.7
SMG1-215ENST00000568239 C3orf22Q8N5N4 141 aa4.42□□□□□ -1.7
SMG1-215ENST00000568239 UBE2AP49459 152 aa4.42□□□□□ -1.7
SMG1-215ENST00000568239 LINC00336Q6ZUF6 198 aa4.42□□□□□ -1.7
SMG1-215ENST00000568239 FAM240AA0A1B0GVK7 77 aa4.41□□□□□ -1.7
SMG1-215ENST00000568239 MT-ATP8P03928 68 aa4.41□□□□□ -1.7
SMG1-215ENST00000568239 ACYP1P07311 99 aa4.41□□□□□ -1.7
SMG1-215ENST00000568239 SRRM2Q9UQ35 2752 aaKnown RBP4.41□□□□□ -1.7
SMG1-215ENST00000568239 Q8N377 158 aa4.41□□□□□ -1.7
SMG1-215ENST00000568239 SMCR5Q8TEV8 140 aa4.41□□□□□ -1.7
SMG1-215ENST00000568239 HECTD4Q9Y4D8 3996 aa4.41□□□□□ -1.7
SMG1-215ENST00000568239 CCKP06307 115 aa4.41□□□□□ -1.7
SMG1-215ENST00000568239 ALMS1Q8TCU4 4167 aa4.4□□□□□ -1.7
SMG1-215ENST00000568239 EPM2AB3EWF7 344 aa4.4□□□□□ -1.7
SMG1-215ENST00000568239 DNAH6Q9C0G6 4158 aa4.4□□□□□ -1.71
SMG1-215ENST00000568239 LINC01547P58512 204 aaPredicted RBP4.39□□□□□ -1.71
SMG1-215ENST00000568239 HAMPP81172 84 aa4.39□□□□□ -1.71
SMG1-215ENST00000568239 LINC00846Q9NV44 126 aa4.39□□□□□ -1.71
SMG1-215ENST00000568239 SACSQ9NZJ4 4579 aa4.39□□□□□ -1.71
SMG1-215ENST00000568239 Q6ZQT0 140 aa4.38□□□□□ -1.71
SMG1-215ENST00000568239 BCE1O60756 84 aa4.38□□□□□ -1.71
SMG1-215ENST00000568239 PLAC8Q9NZF1 115 aa4.38□□□□□ -1.71
SMG1-215ENST00000568239 FAM30AQ9NZY2 134 aa4.38□□□□□ -1.71
SMG1-215ENST00000568239 LCE2AQ5TA79 106 aaPredicted RBP4.38□□□□□ -1.71
SMG1-215ENST00000568239 DNAH5Q8TE73 4624 aa4.37□□□□□ -1.71
SMG1-215ENST00000568239 LOC110117498A0A087WWA1 95 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms