RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 HERVK_113P61574 105 aa11.63□□□□□ -0.55
CHD9-208ENST00000563410 IGKCP01834 107 aa11.62□□□□□ -0.55
CHD9-208ENST00000563410 FABP4P15090 132 aa11.62□□□□□ -0.55
CHD9-208ENST00000563410 NPC2P61916 151 aa11.61□□□□□ -0.55
CHD9-208ENST00000563410 JOSD1Q15040 202 aaPredicted RBP11.61□□□□□ -0.55
CHD9-208ENST00000563410 ADAMTSL4-AS1Q5T5F5 129 aa11.61□□□□□ -0.55
CHD9-208ENST00000563410 XP32Q5T750 250 aa11.61□□□□□ -0.55
CHD9-208ENST00000563410 HSPB8Q9UJY1 196 aa11.61□□□□□ -0.55
CHD9-208ENST00000563410 ZNF73O43830 326 aaPredicted RBP11.6□□□□□ -0.55
CHD9-208ENST00000563410 LINC01547P58512 204 aaPredicted RBP11.6□□□□□ -0.55
CHD9-208ENST00000563410 C9orf153Q5TBE3 101 aa11.6□□□□□ -0.55
CHD9-208ENST00000563410 ST20-AS1Q8NBB2 130 aa11.6□□□□□ -0.55
CHD9-208ENST00000563410 A0A0J9YXY3 114 aa11.59□□□□□ -0.55
CHD9-208ENST00000563410 C5orf52A6NGY3 159 aa11.54□□□□□ -0.56
CHD9-208ENST00000563410 E9PLD3 99 aa11.54□□□□□ -0.56
CHD9-208ENST00000563410 LITAFQ99732 161 aa11.52□□□□□ -0.57
CHD9-208ENST00000563410 SPRR1BP22528 89 aa11.51□□□□□ -0.57
CHD9-208ENST00000563410 LINC00308Q8TCZ7 52 aa11.5□□□□□ -0.57
CHD9-208ENST00000563410 COLCA2A8K830 154 aa11.49□□□□□ -0.57
CHD9-208ENST00000563410 HINT1P49773 126 aaPredicted RBP11.49□□□□□ -0.57
CHD9-208ENST00000563410 LCE2CQ5TA81 110 aa11.49□□□□□ -0.57
CHD9-208ENST00000563410 LCE2DQ5TA82 110 aaPredicted RBP11.49□□□□□ -0.57
CHD9-208ENST00000563410 SPANXCQ9NY87 97 aa11.49□□□□□ -0.57
CHD9-208ENST00000563410 CBY1Q9Y3M2 126 aa11.48□□□□□ -0.57
CHD9-208ENST00000563410 OR13C6PQ8NH95 151 aa11.46□□□□□ -0.57
CHD9-208ENST00000563410 KRTAP19-2Q3LHN2 52 aa11.45□□□□□ -0.58
CHD9-208ENST00000563410 HRCT1Q6UXD1 115 aa11.45□□□□□ -0.58
CHD9-208ENST00000563410 DHRS4-AS1Q9P1J3 65 aa11.45□□□□□ -0.58
CHD9-208ENST00000563410 SYS1-DBNDD2H3BUS1 97 aa11.44□□□□□ -0.58
CHD9-208ENST00000563410 TIMM17BO60830 172 aa11.44□□□□□ -0.58
CHD9-208ENST00000563410 SLC25A34Q6PIV7 304 aa11.43□□□□□ -0.58
CHD9-208ENST00000563410 LIMD2Q9BT23 127 aa11.43□□□□□ -0.58
CHD9-208ENST00000563410 SPANXDQ9BXN6 97 aa11.42□□□□□ -0.58
CHD9-208ENST00000563410 ELOF1P60002 83 aaKnown RBP11.41□□□□□ -0.58
CHD9-208ENST00000563410 LAMTOR3Q9UHA4 124 aa11.41□□□□□ -0.58
CHD9-208ENST00000563410 LINC01545Q5VT33 79 aa11.4□□□□□ -0.58
CHD9-208ENST00000563410 TTTY13Q9BZ97 58 aa11.4□□□□□ -0.58
CHD9-208ENST00000563410 C9orf92A6NGG3 77 aa11.39□□□□□ -0.59
CHD9-208ENST00000563410 PCOTHQ58A44 107 aa11.39□□□□□ -0.59
CHD9-208ENST00000563410 ZNF815PA8K554 130 aa11.38□□□□□ -0.59
CHD9-208ENST00000563410 COX7BP24311 80 aa11.38□□□□□ -0.59
CHD9-208ENST00000563410 C6orf99Q4VX62 202 aa11.38□□□□□ -0.59
CHD9-208ENST00000563410 SLC7A5P1Q8MH63 180 aa11.38□□□□□ -0.59
CHD9-208ENST00000563410 HIST1H2BKO60814 126 aa11.36□□□□□ -0.59
CHD9-208ENST00000563410 HIST1H2BJP06899 126 aa11.36□□□□□ -0.59
CHD9-208ENST00000563410 HIST1H2BOP23527 126 aa11.36□□□□□ -0.59
CHD9-208ENST00000563410 HIST1H2BBP33778 126 aa11.36□□□□□ -0.59
CHD9-208ENST00000563410 HIST1H2BDP58876 126 aa11.36□□□□□ -0.59
CHD9-208ENST00000563410 HIST1H2BCP62807 126 aa11.36□□□□□ -0.59
CHD9-208ENST00000563410 HIST2H2BEQ16778 126 aa11.36□□□□□ -0.59
CHD9-208ENST00000563410 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.36□□□□□ -0.59
CHD9-208ENST00000563410 HIST1H2BHQ93079 126 aa11.36□□□□□ -0.59
CHD9-208ENST00000563410 HIST1H2BNQ99877 126 aa11.36□□□□□ -0.59
CHD9-208ENST00000563410 HIST1H2BMQ99879 126 aa11.36□□□□□ -0.59
CHD9-208ENST00000563410 IGLV8-61A0A075B6I0 122 aa11.35□□□□□ -0.59
CHD9-208ENST00000563410 Q1RN00 199 aa11.35□□□□□ -0.59
CHD9-208ENST00000563410 LINC00518Q8N0U6 118 aa11.35□□□□□ -0.59
CHD9-208ENST00000563410 MT1HP80294 61 aa11.34□□□□□ -0.59
CHD9-208ENST00000563410 CD164Q04900 197 aa11.34□□□□□ -0.59
CHD9-208ENST00000563410 TAL2Q16559 108 aa11.34□□□□□ -0.59
CHD9-208ENST00000563410 PET117Q6UWS5 81 aa11.34□□□□□ -0.59
CHD9-208ENST00000563410 DEFB105AQ8NG35 78 aa11.34□□□□□ -0.59
CHD9-208ENST00000563410 FSIP2Q5CZC0 6907 aa11.34□□□□□ -0.59
CHD9-208ENST00000563410 SMIM29Q86T20 159 aa11.32□□□□□ -0.6
CHD9-208ENST00000563410 PRO1933Q9H354 126 aa11.32□□□□□ -0.6
CHD9-208ENST00000563410 TEX49A0A1B0GTD5 131 aa11.31□□□□□ -0.6
CHD9-208ENST00000563410 TRBV7-6A0A0J9YX20 115 aa11.3□□□□□ -0.6
CHD9-208ENST00000563410 H7C2G1 150 aa11.3□□□□□ -0.6
CHD9-208ENST00000563410 CRCT1Q9UGL9 99 aa11.3□□□□□ -0.6
CHD9-208ENST00000563410 C3orf79P0CE67 100 aa11.29□□□□□ -0.6
CHD9-208ENST00000563410 Q5XG85 94 aa11.29□□□□□ -0.6
CHD9-208ENST00000563410 A0A0G2JQZ4 141 aa11.26□□□□□ -0.61
CHD9-208ENST00000563410 A0A1B0GWB2 263 aa11.26□□□□□ -0.61
CHD9-208ENST00000563410 AKR1D1P51857 326 aa11.26□□□□□ -0.61
CHD9-208ENST00000563410 C1orf195Q5TG92 126 aa11.26□□□□□ -0.61
CHD9-208ENST00000563410 IGLV5-48A0A075B6I7 105 aa11.25□□□□□ -0.61
CHD9-208ENST00000563410 SCGB1D4Q6XE38 83 aa11.24□□□□□ -0.61
CHD9-208ENST00000563410 IFITM1P13164 125 aa11.22□□□□□ -0.61
CHD9-208ENST00000563410 ANKRD39Q53RE8 183 aa11.22□□□□□ -0.61
CHD9-208ENST00000563410 CFC1BP0CG36 223 aa11.21□□□□□ -0.61
CHD9-208ENST00000563410 A6NDN8 102 aa11.2□□□□□ -0.62
CHD9-208ENST00000563410 KRTDAPP60985 99 aa11.2□□□□□ -0.62
CHD9-208ENST00000563410 LORP23490 312 aaPredicted RBP11.19□□□□□ -0.62
CHD9-208ENST00000563410 MUSTN1Q8IVN3 82 aa11.19□□□□□ -0.62
CHD9-208ENST00000563410 COPS9Q8WXC6 57 aa11.19□□□□□ -0.62
CHD9-208ENST00000563410 FLGP20930 4061 aaPredicted RBP11.19□□□□□ -0.62
CHD9-208ENST00000563410 RPL37P61927 97 aaKnown RBP11.18□□□□□ -0.62
CHD9-208ENST00000563410 COA6Q5JTJ3 125 aaKnown RBP11.18□□□□□ -0.62
CHD9-208ENST00000563410 Q6ZVH6 145 aa11.18□□□□□ -0.62
CHD9-208ENST00000563410 A4D1N5 150 aa11.16□□□□□ -0.62
CHD9-208ENST00000563410 KRTAP10-6P60371 365 aaPredicted RBP11.16□□□□□ -0.62
CHD9-208ENST00000563410 PCP2Q8IVA1 136 aa11.15□□□□□ -0.62
CHD9-208ENST00000563410 ATOH7Q8N100 152 aa11.14□□□□□ -0.63
CHD9-208ENST00000563410 SMIM11BQ8TCY0 68 aa11.14□□□□□ -0.63
CHD9-208ENST00000563410 C20orf202A1L168 122 aa11.12□□□□□ -0.63
CHD9-208ENST00000563410 NHP2Q9NX24 153 aaKnown RBP11.12□□□□□ -0.63
CHD9-208ENST00000563410 TRAV13-2A0A0B4J235 113 aa11.11□□□□□ -0.63
CHD9-208ENST00000563410 TCL1BO95988 128 aa11.09□□□□□ -0.63
CHD9-208ENST00000563410 M0R2T5 61 aa11.05□□□□□ -0.64
CHD9-208ENST00000563410 LINC00575Q6W349 94 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms