RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 DNAH17Q9UFH2 4485 aa11.52□□□□□ -0.57
COMMD4-208ENST00000563220 TRAV23DV6A0A075B6W5 121 aa11.52□□□□□ -0.57
COMMD4-208ENST00000563220 FUSP35637 526 aaKnown RBP eCLIP11.51□□□□□ -0.57
COMMD4-208ENST00000563220 SDIM1Q6ZPB5 146 aa11.51□□□□□ -0.57
COMMD4-208ENST00000563220 FAM19A5Q7Z5A7 132 aaPredicted RBP11.51□□□□□ -0.57
COMMD4-208ENST00000563220 CHTF8P0CG12 524 aa11.5□□□□□ -0.57
COMMD4-208ENST00000563220 INAFM2P0DMQ5 153 aa11.5□□□□□ -0.57
COMMD4-208ENST00000563220 HYDINQ4G0P3 5121 aa11.49□□□□□ -0.57
COMMD4-208ENST00000563220 A0A1W2PNN7 141 aa11.49□□□□□ -0.57
COMMD4-208ENST00000563220 ZNF73O43830 326 aaPredicted RBP11.49□□□□□ -0.57
COMMD4-208ENST00000563220 DNAL4O96015 105 aa11.48□□□□□ -0.57
COMMD4-208ENST00000563220 TNP2Q05952 138 aa11.48□□□□□ -0.57
COMMD4-208ENST00000563220 LINC00167Q96N53 147 aa11.47□□□□□ -0.57
COMMD4-208ENST00000563220 RTL8CO15255 209 aa11.46□□□□□ -0.57
COMMD4-208ENST00000563220 DIRC1Q969H9 104 aa11.46□□□□□ -0.57
COMMD4-208ENST00000563220 HECTD4Q9Y4D8 3996 aa11.46□□□□□ -0.57
COMMD4-208ENST00000563220 RPL37AP8A6NKH3 93 aa11.46□□□□□ -0.58
COMMD4-208ENST00000563220 KCNQ1DNQ9H478 68 aa11.46□□□□□ -0.58
COMMD4-208ENST00000563220 TRBV7-7A0A0K0K1E9 115 aa11.45□□□□□ -0.58
COMMD4-208ENST00000563220 MRPL55Q7Z7F7 128 aaKnown RBP11.45□□□□□ -0.58
COMMD4-208ENST00000563220 IGLV1-50A0A075B6I6 118 aa11.44□□□□□ -0.58
COMMD4-208ENST00000563220 A0A1B0GX51 115 aa11.44□□□□□ -0.58
COMMD4-208ENST00000563220 PANO1I0J062 215 aa11.44□□□□□ -0.58
COMMD4-208ENST00000563220 LINC00575Q6W349 94 aa11.44□□□□□ -0.58
COMMD4-208ENST00000563220 OBSCN-AS1Q96MR7 158 aa11.44□□□□□ -0.58
COMMD4-208ENST00000563220 ANAPC13Q9BS18 74 aa11.44□□□□□ -0.58
COMMD4-208ENST00000563220 PKIGQ9Y2B9 76 aa11.43□□□□□ -0.58
COMMD4-208ENST00000563220 FRAS1Q86XX4 4008 aa11.43□□□□□ -0.58
COMMD4-208ENST00000563220 NDUFV3P56181 108 aaKnown RBP11.42□□□□□ -0.58
COMMD4-208ENST00000563220 SACSQ9NZJ4 4579 aa11.42□□□□□ -0.58
COMMD4-208ENST00000563220 IMUPQ9GZP8 106 aa11.42□□□□□ -0.58
COMMD4-208ENST00000563220 TRBV7-6A0A0J9YX20 115 aa11.41□□□□□ -0.58
COMMD4-208ENST00000563220 COX7BP24311 80 aa11.41□□□□□ -0.58
COMMD4-208ENST00000563220 ELOF1P60002 83 aaKnown RBP11.41□□□□□ -0.58
COMMD4-208ENST00000563220 LINC00643Q86TS7 51 aa11.41□□□□□ -0.58
COMMD4-208ENST00000563220 IGLV5-52A0A0A0MRZ9 124 aa11.4□□□□□ -0.59
COMMD4-208ENST00000563220 LINC00474Q9P2X8 69 aa11.4□□□□□ -0.59
COMMD4-208ENST00000563220 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.4□□□□□ -0.59
COMMD4-208ENST00000563220 DNAH11Q96DT5 4516 aa11.38□□□□□ -0.59
COMMD4-208ENST00000563220 hADV29S1A0JD25 119 aa11.38□□□□□ -0.59
COMMD4-208ENST00000563220 PRYO14603 147 aa11.38□□□□□ -0.59
COMMD4-208ENST00000563220 ORMDL1Q9P0S3 153 aa11.38□□□□□ -0.59
COMMD4-208ENST00000563220 SPRR1AP35321 89 aa11.37□□□□□ -0.59
COMMD4-208ENST00000563220 PHF5AQ7RTV0 110 aaKnown RBP11.37□□□□□ -0.59
COMMD4-208ENST00000563220 LINC00528Q8N1L1 170 aa11.37□□□□□ -0.59
COMMD4-208ENST00000563220 SPACA4Q8TDM5 124 aa11.37□□□□□ -0.59
COMMD4-208ENST00000563220 LCE6AA0A183 80 aa11.36□□□□□ -0.59
COMMD4-208ENST00000563220 KRTAP4-16G5E9R7 235 aaPredicted RBP11.36□□□□□ -0.59
COMMD4-208ENST00000563220 SMCR5Q8TEV8 140 aa11.36□□□□□ -0.59
COMMD4-208ENST00000563220 KRTAP10-2P60368 255 aa11.36□□□□□ -0.59
COMMD4-208ENST00000563220 DPH3Q96FX2 82 aa11.36□□□□□ -0.59
COMMD4-208ENST00000563220 FAT2Q9NYQ8 4349 aa11.35□□□□□ -0.59
COMMD4-208ENST00000563220 GAGE2AQ6NT46 116 aa11.34□□□□□ -0.59
COMMD4-208ENST00000563220 KRTAP11-1Q8IUC1 163 aa11.34□□□□□ -0.59
COMMD4-208ENST00000563220 EPM2AB3EWF7 344 aa11.32□□□□□ -0.6
COMMD4-208ENST00000563220 B5MCH6 92 aa11.32□□□□□ -0.6
COMMD4-208ENST00000563220 REG3GQ6UW15 175 aa11.32□□□□□ -0.6
COMMD4-208ENST00000563220 Q6ZQY7 126 aa11.31□□□□□ -0.6
COMMD4-208ENST00000563220 DNAH5Q8TE73 4624 aa11.3□□□□□ -0.6
COMMD4-208ENST00000563220 ETDCA0A1B0GVM5 59 aa11.3□□□□□ -0.6
COMMD4-208ENST00000563220 C14orf132Q9NPU4 83 aa11.3□□□□□ -0.6
COMMD4-208ENST00000563220 JMJD7-PLA2G4BH0Y9G9 81 aa11.29□□□□□ -0.6
COMMD4-208ENST00000563220 TMEM256-PLSCR3K7ERE1 68 aa11.29□□□□□ -0.6
COMMD4-208ENST00000563220 Q6ZRX8 168 aa11.29□□□□□ -0.6
COMMD4-208ENST00000563220 UBE2BP63146 152 aa11.29□□□□□ -0.6
COMMD4-208ENST00000563220 Q9BRP9 147 aa11.28□□□□□ -0.6
COMMD4-208ENST00000563220 PKD1P98161 4303 aa11.27□□□□□ -0.61
COMMD4-208ENST00000563220 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.27□□□□□ -0.61
COMMD4-208ENST00000563220 CCKP06307 115 aa11.25□□□□□ -0.61
COMMD4-208ENST00000563220 PLAC8Q9NZF1 115 aa11.25□□□□□ -0.61
COMMD4-208ENST00000563220 DHRS4-AS1Q9P1J3 65 aa11.24□□□□□ -0.61
COMMD4-208ENST00000563220 H3BQ85 93 aa11.23□□□□□ -0.61
COMMD4-208ENST00000563220 Q6JHZ5 121 aa11.23□□□□□ -0.61
COMMD4-208ENST00000563220 FAM19A1Q7Z5A9 133 aa11.23□□□□□ -0.61
COMMD4-208ENST00000563220 FAM30AQ9NZY2 134 aa11.23□□□□□ -0.61
COMMD4-208ENST00000563220 DNAH8Q96JB1 4490 aa11.22□□□□□ -0.61
COMMD4-208ENST00000563220 FAM236AA0A1B0GUQ0 79 aa11.22□□□□□ -0.61
COMMD4-208ENST00000563220 FAM236BA0A1B0GV22 79 aa11.22□□□□□ -0.61
COMMD4-208ENST00000563220 LINC00846Q9NV44 126 aa11.22□□□□□ -0.61
COMMD4-208ENST00000563220 ERC2-IT1O76042 136 aa11.21□□□□□ -0.61
COMMD4-208ENST00000563220 PRLHP81277 87 aa11.21□□□□□ -0.61
COMMD4-208ENST00000563220 CCDC179H3BU77 68 aa11.2□□□□□ -0.62
COMMD4-208ENST00000563220 KRTAP10-1P60331 282 aa11.2□□□□□ -0.62
COMMD4-208ENST00000563220 RYR2Q92736 4967 aa11.18□□□□□ -0.62
COMMD4-208ENST00000563220 ST20-AS1Q8NBB2 130 aa11.18□□□□□ -0.62
COMMD4-208ENST00000563220 KMT2CQ8NEZ4 4911 aaKnown RBP11.18□□□□□ -0.62
COMMD4-208ENST00000563220 LINC01547P58512 204 aaPredicted RBP11.17□□□□□ -0.62
COMMD4-208ENST00000563220 HIST1H4AP62805 103 aaKnown RBP11.17□□□□□ -0.62
COMMD4-208ENST00000563220 LINC00336Q6ZUF6 198 aa11.17□□□□□ -0.62
COMMD4-208ENST00000563220 DEFB105AQ8NG35 78 aa11.17□□□□□ -0.62
COMMD4-208ENST00000563220 BCE1O60756 84 aa11.15□□□□□ -0.62
COMMD4-208ENST00000563220 GHRHP01286 108 aa11.15□□□□□ -0.62
COMMD4-208ENST00000563220 Q6ZSA8 131 aa11.15□□□□□ -0.62
COMMD4-208ENST00000563220 Q8N377 158 aa11.15□□□□□ -0.62
COMMD4-208ENST00000563220 LAMTOR3Q9UHA4 124 aa11.15□□□□□ -0.62
COMMD4-208ENST00000563220 LOC110117498A0A087WWA1 95 aa11.15□□□□□ -0.63
COMMD4-208ENST00000563220 CIRBP-AS1Q8TBR5 109 aa11.15□□□□□ -0.63
COMMD4-208ENST00000563220 H0Y9J4 135 aa11.14□□□□□ -0.63
COMMD4-208ENST00000563220 HIGD2AQ9BW72 106 aa11.14□□□□□ -0.63
COMMD4-208ENST00000563220 ATP5EP2Q5VTU8 51 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms