RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 C6orf226Q5I0X4 101 aa2.77□□□□□ -1.97
SMG1-206ENST00000562668 Q8NDZ9 215 aa2.77□□□□□ -1.97
SMG1-206ENST00000562668 IGKV2D-26A0A0A0MRZ7 120 aa2.76□□□□□ -1.97
SMG1-206ENST00000562668 E9PLD3 99 aa2.76□□□□□ -1.97
SMG1-206ENST00000562668 LEPROTO15243 131 aa2.76□□□□□ -1.97
SMG1-206ENST00000562668 HNRNPA3P51991 378 aaKnown RBP2.76□□□□□ -1.97
SMG1-206ENST00000562668 CKS1BP61024 79 aa2.76□□□□□ -1.97
SMG1-206ENST00000562668 MAJINQ3KP22 176 aa2.76□□□□□ -1.97
SMG1-206ENST00000562668 Q5VSD8 79 aa2.76□□□□□ -1.97
SMG1-206ENST00000562668 PP632Q6XCG6 107 aa2.76□□□□□ -1.97
SMG1-206ENST00000562668 LINC00474Q9P2X8 69 aa2.76□□□□□ -1.97
SMG1-206ENST00000562668 HERC1Q15751 4861 aa2.76□□□□□ -1.97
SMG1-206ENST00000562668 SRRM2Q9UQ35 2752 aaKnown RBP2.75□□□□□ -1.97
SMG1-206ENST00000562668 J3QQQ9 107 aa2.75□□□□□ -1.97
SMG1-206ENST00000562668 KRTDAPP60985 99 aa2.75□□□□□ -1.97
SMG1-206ENST00000562668 RPL18AQ02543 176 aaKnown RBP2.75□□□□□ -1.97
SMG1-206ENST00000562668 COX17Q14061 63 aa2.75□□□□□ -1.97
SMG1-206ENST00000562668 ERG28Q9UKR5 140 aa2.75□□□□□ -1.97
SMG1-206ENST00000562668 PKIGQ9Y2B9 76 aa2.75□□□□□ -1.97
SMG1-206ENST00000562668 HMCN2Q8NDA2 5059 aa2.75□□□□□ -1.97
SMG1-206ENST00000562668 LOC107984156A0A0G2JMH3 177 aa2.74□□□□□ -1.97
SMG1-206ENST00000562668 S100A6P06703 90 aa2.74□□□□□ -1.97
SMG1-206ENST00000562668 SFTA2Q6UW10 78 aa2.74□□□□□ -1.97
SMG1-206ENST00000562668 PHF5AQ7RTV0 110 aaKnown RBP2.74□□□□□ -1.97
SMG1-206ENST00000562668 ARL17AQ8IVW1 177 aa2.74□□□□□ -1.97
SMG1-206ENST00000562668 ATOH7Q8N100 152 aa2.74□□□□□ -1.97
SMG1-206ENST00000562668 PLEKHB2Q96CS7 222 aa2.74□□□□□ -1.97
SMG1-206ENST00000562668 TTTY13Q9BZ97 58 aa2.74□□□□□ -1.97
SMG1-206ENST00000562668 SND1-IT1Q9HBX3 110 aa2.74□□□□□ -1.97
SMG1-206ENST00000562668 XAGE1AQ9HD64 81 aa2.74□□□□□ -1.97
SMG1-206ENST00000562668 NDUFA12Q9UI09 145 aa2.74□□□□□ -1.97
SMG1-206ENST00000562668 A0A0J9YXY3 114 aa2.73□□□□□ -1.97
SMG1-206ENST00000562668 MYMXA0A1B0GTQ4 84 aa2.73□□□□□ -1.97
SMG1-206ENST00000562668 SMIM13P0DJ93 91 aa2.73□□□□□ -1.97
SMG1-206ENST00000562668 PFN2P35080 140 aa2.73□□□□□ -1.97
SMG1-206ENST00000562668 NMUP48645 174 aa2.73□□□□□ -1.97
SMG1-206ENST00000562668 HERV-K104P63124 156 aa2.73□□□□□ -1.97
SMG1-206ENST00000562668 PRR3P79522 188 aaKnown RBP2.73□□□□□ -1.97
SMG1-206ENST00000562668 SOSTDC1Q6X4U4 206 aa2.73□□□□□ -1.97
SMG1-206ENST00000562668 FAM19A5Q7Z5A7 132 aaPredicted RBP2.73□□□□□ -1.97
SMG1-206ENST00000562668 C22orf24Q9Y442 160 aa2.73□□□□□ -1.97
SMG1-206ENST00000562668 M0QXV9 152 aa2.72□□□□□ -1.97
SMG1-206ENST00000562668 S100A2P29034 98 aa2.72□□□□□ -1.97
SMG1-206ENST00000562668 RPL37AP61513 92 aaKnown RBP2.72□□□□□ -1.97
SMG1-206ENST00000562668 HERVK_113P61574 105 aa2.72□□□□□ -1.97
SMG1-206ENST00000562668 PCP2Q8IVA1 136 aa2.72□□□□□ -1.97
SMG1-206ENST00000562668 MIR7-3HGQ8N6C7 128 aa2.72□□□□□ -1.97
SMG1-206ENST00000562668 DAND5Q8N907 189 aa2.72□□□□□ -1.97
SMG1-206ENST00000562668 C7orf33Q8WU49 177 aa2.72□□□□□ -1.97
SMG1-206ENST00000562668 TP73-AS1Q9UF72 201 aa2.72□□□□□ -1.97
SMG1-206ENST00000562668 PSORS1C2Q9UIG4 136 aa2.72□□□□□ -1.97
SMG1-206ENST00000562668 A0A0U1RRA0 63 aa2.71□□□□□ -1.98
SMG1-206ENST00000562668 C20orf202A1L168 122 aa2.71□□□□□ -1.98
SMG1-206ENST00000562668 TIMM17BO60830 172 aa2.71□□□□□ -1.98
SMG1-206ENST00000562668 INAFM2P0DMQ5 153 aa2.71□□□□□ -1.98
SMG1-206ENST00000562668 LGALS3P17931 250 aaKnown RBP2.71□□□□□ -1.98
SMG1-206ENST00000562668 LINC00158P58513 81 aa2.71□□□□□ -1.98
SMG1-206ENST00000562668 JOSD1Q15040 202 aaPredicted RBP2.71□□□□□ -1.98
SMG1-206ENST00000562668 MRPL55Q7Z7F7 128 aaKnown RBP2.71□□□□□ -1.98
SMG1-206ENST00000562668 KRTAP13-1Q8IUC0 172 aa2.71□□□□□ -1.98
SMG1-206ENST00000562668 DPH3Q96FX2 82 aa2.71□□□□□ -1.98
SMG1-206ENST00000562668 IGLV1-50A0A075B6I6 118 aa2.7□□□□□ -1.98
SMG1-206ENST00000562668 ZNF815PA8K554 130 aa2.7□□□□□ -1.98
SMG1-206ENST00000562668 LINC00587B1AMM8 73 aa2.7□□□□□ -1.98
SMG1-206ENST00000562668 AKR1D1P51857 326 aa2.7□□□□□ -1.98
SMG1-206ENST00000562668 PYY3Q5JQD4 70 aa2.7□□□□□ -1.98
SMG1-206ENST00000562668 MEIG1Q5JSS6 88 aa2.7□□□□□ -1.98
SMG1-206ENST00000562668 IGKV2-28A0A075B6P5 120 aa2.69□□□□□ -1.98
SMG1-206ENST00000562668 KRTAP4-16G5E9R7 235 aaPredicted RBP2.69□□□□□ -1.98
SMG1-206ENST00000562668 M0R378 163 aa2.69□□□□□ -1.98
SMG1-206ENST00000562668 NDUFC2O95298 119 aa2.69□□□□□ -1.98
SMG1-206ENST00000562668 IGKV2D-28P01615 120 aa2.69□□□□□ -1.98
SMG1-206ENST00000562668 IGLV7-43P04211 117 aa2.69□□□□□ -1.98
SMG1-206ENST00000562668 SPRR1AP35321 89 aa2.69□□□□□ -1.98
SMG1-206ENST00000562668 BOD1L2Q8IYS8 172 aa2.69□□□□□ -1.98
SMG1-206ENST00000562668 LINC00308Q8TCZ7 52 aa2.69□□□□□ -1.98
SMG1-206ENST00000562668 SPANXDQ9BXN6 97 aa2.69□□□□□ -1.98
SMG1-206ENST00000562668 PPDPFQ9H3Y8 114 aa2.69□□□□□ -1.98
SMG1-206ENST00000562668 SPANXCQ9NY87 97 aa2.69□□□□□ -1.98
SMG1-206ENST00000562668 TRBV10-2A0A0K0K1G8 114 aa2.68□□□□□ -1.98
SMG1-206ENST00000562668 TMEM238C9JI98 176 aa2.68□□□□□ -1.98
SMG1-206ENST00000562668 DLEU1O43261 78 aa2.68□□□□□ -1.98
SMG1-206ENST00000562668 MT1HL1P0DM35 61 aa2.68□□□□□ -1.98
SMG1-206ENST00000562668 COX8AP10176 69 aa2.68□□□□□ -1.98
SMG1-206ENST00000562668 NPC2P61916 151 aa2.68□□□□□ -1.98
SMG1-206ENST00000562668 C1orf137Q5JT78 98 aa2.68□□□□□ -1.98
SMG1-206ENST00000562668 SPINK6Q6UWN8 80 aa2.68□□□□□ -1.98
SMG1-206ENST00000562668 KCNQ1DNQ9H478 68 aa2.68□□□□□ -1.98
SMG1-206ENST00000562668 FLG2Q5D862 2391 aaPredicted RBP2.67□□□□□ -1.98
SMG1-206ENST00000562668 TRBV10-3A0A0K0K1G6 114 aa2.67□□□□□ -1.98
SMG1-206ENST00000562668 NCR3O14931 201 aa2.67□□□□□ -1.98
SMG1-206ENST00000562668 BCE1O60756 84 aa2.67□□□□□ -1.98
SMG1-206ENST00000562668 IGLV6-57P01721 117 aa2.67□□□□□ -1.98
SMG1-206ENST00000562668 UBE2BP63146 152 aa2.67□□□□□ -1.98
SMG1-206ENST00000562668 SPATA45Q537H7 98 aa2.67□□□□□ -1.98
SMG1-206ENST00000562668 C2orf91Q6ZV80 131 aa2.67□□□□□ -1.98
SMG1-206ENST00000562668 MUSTN1Q8IVN3 82 aa2.67□□□□□ -1.98
SMG1-206ENST00000562668 NKAPP1Q8N9T2 125 aa2.67□□□□□ -1.98
SMG1-206ENST00000562668 TMEM126AQ9H061 195 aa2.67□□□□□ -1.98
SMG1-206ENST00000562668 SPANXB1Q9NS25 103 aaPredicted RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms