RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 NMUP48645 174 aa9.22□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 FSIP2Q5CZC0 6907 aa9.22□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 DPM2O94777 84 aa9.21□□□□□ -0.94
VPS9D1-AS1-201ENST00000562298 JOSD1Q15040 202 aaPredicted RBP9.21□□□□□ -0.94
VPS9D1-AS1-201ENST00000562298 ST20-AS1Q8NBB2 130 aa9.21□□□□□ -0.94
VPS9D1-AS1-201ENST00000562298 ZNF73O43830 326 aaPredicted RBP9.2□□□□□ -0.94
VPS9D1-AS1-201ENST00000562298 LGALS3P17931 250 aaKnown RBP9.2□□□□□ -0.94
VPS9D1-AS1-201ENST00000562298 HERVK_113P61574 105 aa9.2□□□□□ -0.94
VPS9D1-AS1-201ENST00000562298 NPC2P61916 151 aa9.2□□□□□ -0.94
VPS9D1-AS1-201ENST00000562298 LCE2DQ5TA82 110 aaPredicted RBP9.2□□□□□ -0.94
VPS9D1-AS1-201ENST00000562298 IGKCP01834 107 aa9.19□□□□□ -0.94
VPS9D1-AS1-201ENST00000562298 ADAMTSL4-AS1Q5T5F5 129 aa9.19□□□□□ -0.94
VPS9D1-AS1-201ENST00000562298 FABP4P15090 132 aa9.18□□□□□ -0.94
VPS9D1-AS1-201ENST00000562298 LCE2CQ5TA81 110 aa9.18□□□□□ -0.94
VPS9D1-AS1-201ENST00000562298 HSPB8Q9UJY1 196 aa9.18□□□□□ -0.94
VPS9D1-AS1-201ENST00000562298 A0A0J9YXY3 114 aa9.17□□□□□ -0.94
VPS9D1-AS1-201ENST00000562298 C5orf52A6NGY3 159 aa9.14□□□□□ -0.95
VPS9D1-AS1-201ENST00000562298 KRTAP19-2Q3LHN2 52 aa9.14□□□□□ -0.95
VPS9D1-AS1-201ENST00000562298 E9PLD3 99 aa9.13□□□□□ -0.95
VPS9D1-AS1-201ENST00000562298 SPRR1BP22528 89 aa9.12□□□□□ -0.95
VPS9D1-AS1-201ENST00000562298 HINT1P49773 126 aaPredicted RBP9.11□□□□□ -0.95
VPS9D1-AS1-201ENST00000562298 HRCT1Q6UXD1 115 aa9.11□□□□□ -0.95
VPS9D1-AS1-201ENST00000562298 LITAFQ99732 161 aa9.11□□□□□ -0.95
VPS9D1-AS1-201ENST00000562298 SPANXCQ9NY87 97 aa9.1□□□□□ -0.95
VPS9D1-AS1-201ENST00000562298 PCOTHQ58A44 107 aa9.09□□□□□ -0.95
VPS9D1-AS1-201ENST00000562298 LINC00308Q8TCZ7 52 aa9.09□□□□□ -0.95
VPS9D1-AS1-201ENST00000562298 LIMD2Q9BT23 127 aa9.09□□□□□ -0.95
VPS9D1-AS1-201ENST00000562298 CBY1Q9Y3M2 126 aa9.09□□□□□ -0.95
VPS9D1-AS1-201ENST00000562298 C9orf92A6NGG3 77 aa9.08□□□□□ -0.96
VPS9D1-AS1-201ENST00000562298 OR13C6PQ8NH95 151 aa9.08□□□□□ -0.96
VPS9D1-AS1-201ENST00000562298 MT1HP80294 61 aa9.07□□□□□ -0.96
VPS9D1-AS1-201ENST00000562298 SLC25A34Q6PIV7 304 aa9.07□□□□□ -0.96
VPS9D1-AS1-201ENST00000562298 DHRS4-AS1Q9P1J3 65 aa9.07□□□□□ -0.96
VPS9D1-AS1-201ENST00000562298 CRCT1Q9UGL9 99 aa9.07□□□□□ -0.96
VPS9D1-AS1-201ENST00000562298 IGLV8-61A0A075B6I0 122 aa9.05□□□□□ -0.96
VPS9D1-AS1-201ENST00000562298 COLCA2A8K830 154 aa9.05□□□□□ -0.96
VPS9D1-AS1-201ENST00000562298 TIMM17BO60830 172 aa9.05□□□□□ -0.96
VPS9D1-AS1-201ENST00000562298 ELOF1P60002 83 aaKnown RBP9.05□□□□□ -0.96
VPS9D1-AS1-201ENST00000562298 SPANXDQ9BXN6 97 aa9.05□□□□□ -0.96
VPS9D1-AS1-201ENST00000562298 LAMTOR3Q9UHA4 124 aa9.05□□□□□ -0.96
VPS9D1-AS1-201ENST00000562298 SYS1-DBNDD2H3BUS1 97 aa9.03□□□□□ -0.96
VPS9D1-AS1-201ENST00000562298 C6orf99Q4VX62 202 aa9.03□□□□□ -0.96
VPS9D1-AS1-201ENST00000562298 COX7BP24311 80 aa9.02□□□□□ -0.97
VPS9D1-AS1-201ENST00000562298 Q1RN00 199 aa9.02□□□□□ -0.97
VPS9D1-AS1-201ENST00000562298 TTTY13Q9BZ97 58 aa9.02□□□□□ -0.97
VPS9D1-AS1-201ENST00000562298 CD164Q04900 197 aa9.01□□□□□ -0.97
VPS9D1-AS1-201ENST00000562298 ZNF815PA8K554 130 aa9□□□□□ -0.97
VPS9D1-AS1-201ENST00000562298 LINC01545Q5VT33 79 aa9□□□□□ -0.97
VPS9D1-AS1-201ENST00000562298 DEFB105AQ8NG35 78 aa9□□□□□ -0.97
VPS9D1-AS1-201ENST00000562298 H7C2G1 150 aa8.99□□□□□ -0.97
VPS9D1-AS1-201ENST00000562298 TAL2Q16559 108 aa8.99□□□□□ -0.97
VPS9D1-AS1-201ENST00000562298 PRO1933Q9H354 126 aa8.99□□□□□ -0.97
VPS9D1-AS1-201ENST00000562298 SMIM29Q86T20 159 aa8.98□□□□□ -0.97
VPS9D1-AS1-201ENST00000562298 LINC00518Q8N0U6 118 aa8.98□□□□□ -0.97
VPS9D1-AS1-201ENST00000562298 TEX49A0A1B0GTD5 131 aa8.97□□□□□ -0.97
VPS9D1-AS1-201ENST00000562298 CFC1BP0CG36 223 aa8.96□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 Q5XG85 94 aa8.96□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 SLC7A5P1Q8MH63 180 aa8.96□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 A0A0G2JQZ4 141 aa8.95□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 HIST1H2BKO60814 126 aa8.95□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 HIST1H2BJP06899 126 aa8.95□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 LORP23490 312 aaPredicted RBP8.95□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 HIST1H2BOP23527 126 aa8.95□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 HIST1H2BBP33778 126 aa8.95□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 HIST1H2BDP58876 126 aa8.95□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 HIST1H2BCP62807 126 aa8.95□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 HIST2H2BEQ16778 126 aa8.95□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.95□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 C1orf195Q5TG92 126 aa8.95□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 PET117Q6UWS5 81 aa8.95□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 HIST1H2BHQ93079 126 aa8.95□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 HIST1H2BNQ99877 126 aa8.95□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 HIST1H2BMQ99879 126 aa8.95□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 TRBV7-6A0A0J9YX20 115 aa8.94□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 IGLV5-48A0A075B6I7 105 aa8.93□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 AKR1D1P51857 326 aa8.93□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 FLGP20930 4061 aaPredicted RBP8.92□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 KRTAP10-6P60371 365 aaPredicted RBP8.92□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 A0A1B0GWB2 263 aa8.91□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 C3orf79P0CE67 100 aa8.91□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 RPL37P61927 97 aaKnown RBP8.91□□□□□ -0.98
VPS9D1-AS1-201ENST00000562298 SCGB1D4Q6XE38 83 aa8.89□□□□□ -0.99
VPS9D1-AS1-201ENST00000562298 A6NDN8 102 aa8.87□□□□□ -0.99
VPS9D1-AS1-201ENST00000562298 ANKRD39Q53RE8 183 aa8.87□□□□□ -0.99
VPS9D1-AS1-201ENST00000562298 IFITM1P13164 125 aa8.86□□□□□ -0.99
VPS9D1-AS1-201ENST00000562298 KRTDAPP60985 99 aa8.85□□□□□ -0.99
VPS9D1-AS1-201ENST00000562298 MUSTN1Q8IVN3 82 aa8.85□□□□□ -0.99
VPS9D1-AS1-201ENST00000562298 COPS9Q8WXC6 57 aa8.85□□□□□ -0.99
VPS9D1-AS1-201ENST00000562298 A4D1N5 150 aa8.83□□□□□ -1
VPS9D1-AS1-201ENST00000562298 M0R2T5 61 aa8.83□□□□□ -1
VPS9D1-AS1-201ENST00000562298 Q6ZVH6 145 aa8.83□□□□□ -1
VPS9D1-AS1-201ENST00000562298 SMIM11BQ8TCY0 68 aa8.82□□□□□ -1
VPS9D1-AS1-201ENST00000562298 COX6B2Q6YFQ2 88 aa8.81□□□□□ -1
VPS9D1-AS1-201ENST00000562298 PCP2Q8IVA1 136 aa8.81□□□□□ -1
VPS9D1-AS1-201ENST00000562298 ATOH7Q8N100 152 aa8.81□□□□□ -1
VPS9D1-AS1-201ENST00000562298 NHP2Q9NX24 153 aaKnown RBP8.81□□□□□ -1
VPS9D1-AS1-201ENST00000562298 TCL1BO95988 128 aa8.8□□□□□ -1
VPS9D1-AS1-201ENST00000562298 COA6Q5JTJ3 125 aaKnown RBP8.8□□□□□ -1
VPS9D1-AS1-201ENST00000562298 TRAV13-2A0A0B4J235 113 aa8.78□□□□□ -1
VPS9D1-AS1-201ENST00000562298 C20orf202A1L168 122 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms