RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 PPDPFLQ8WWR9 84 aa6.92□□□□□ -1.3
SNRPA1-211ENST00000560433 MRPL55Q7Z7F7 128 aaKnown RBP6.91□□□□□ -1.3
SNRPA1-211ENST00000560433 hADV29S1A0JD25 119 aa6.91□□□□□ -1.3
SNRPA1-211ENST00000560433 M0QXV9 152 aa6.91□□□□□ -1.3
SNRPA1-211ENST00000560433 DPH3Q96FX2 82 aa6.91□□□□□ -1.3
SNRPA1-211ENST00000560433 VPS25Q9BRG1 176 aa6.91□□□□□ -1.3
SNRPA1-211ENST00000560433 IGLV1-50A0A075B6I6 118 aa6.9□□□□□ -1.3
SNRPA1-211ENST00000560433 COX7BP24311 80 aa6.9□□□□□ -1.3
SNRPA1-211ENST00000560433 TNP2Q05952 138 aa6.9□□□□□ -1.3
SNRPA1-211ENST00000560433 SDIM1Q6ZPB5 146 aa6.9□□□□□ -1.3
SNRPA1-211ENST00000560433 SACSQ9NZJ4 4579 aa6.9□□□□□ -1.3
SNRPA1-211ENST00000560433 ALMS1Q8TCU4 4167 aa6.9□□□□□ -1.3
SNRPA1-211ENST00000560433 Q6ZQY7 126 aa6.9□□□□□ -1.31
SNRPA1-211ENST00000560433 PLA2G2DQ9UNK4 145 aa6.9□□□□□ -1.31
SNRPA1-211ENST00000560433 ELOF1P60002 83 aaKnown RBP6.89□□□□□ -1.31
SNRPA1-211ENST00000560433 PHF5AQ7RTV0 110 aaKnown RBP6.89□□□□□ -1.31
SNRPA1-211ENST00000560433 ORMDL1Q9P0S3 153 aa6.89□□□□□ -1.31
SNRPA1-211ENST00000560433 DNAH5Q8TE73 4624 aa6.89□□□□□ -1.31
SNRPA1-211ENST00000560433 SRRM2Q9UQ35 2752 aaKnown RBP6.89□□□□□ -1.31
SNRPA1-211ENST00000560433 KCNQ1DNQ9H478 68 aa6.89□□□□□ -1.31
SNRPA1-211ENST00000560433 FAT2Q9NYQ8 4349 aa6.89□□□□□ -1.31
SNRPA1-211ENST00000560433 KRTAP11-1Q8IUC1 163 aa6.88□□□□□ -1.31
SNRPA1-211ENST00000560433 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.88□□□□□ -1.31
SNRPA1-211ENST00000560433 DNAH11Q96DT5 4516 aa6.88□□□□□ -1.31
SNRPA1-211ENST00000560433 C3orf84H3BNL1 204 aa6.88□□□□□ -1.31
SNRPA1-211ENST00000560433 RTL8CO15255 209 aa6.88□□□□□ -1.31
SNRPA1-211ENST00000560433 IGLV5-37A0A075B6J1 123 aa6.87□□□□□ -1.31
SNRPA1-211ENST00000560433 LINC01600Q96MT4 127 aa6.87□□□□□ -1.31
SNRPA1-211ENST00000560433 DNAH8Q96JB1 4490 aa6.87□□□□□ -1.31
SNRPA1-211ENST00000560433 J3QR89 54 aa6.87□□□□□ -1.31
SNRPA1-211ENST00000560433 LINC00528Q8N1L1 170 aa6.87□□□□□ -1.31
SNRPA1-211ENST00000560433 C14orf132Q9NPU4 83 aa6.86□□□□□ -1.31
SNRPA1-211ENST00000560433 DEFB105AQ8NG35 78 aa6.85□□□□□ -1.31
SNRPA1-211ENST00000560433 A0A1B0GX51 115 aa6.85□□□□□ -1.31
SNRPA1-211ENST00000560433 Q9BRP9 147 aa6.85□□□□□ -1.31
SNRPA1-211ENST00000560433 PKD1P98161 4303 aa6.84□□□□□ -1.31
SNRPA1-211ENST00000560433 IGLV5-52A0A0A0MRZ9 124 aa6.84□□□□□ -1.31
SNRPA1-211ENST00000560433 ETDCA0A1B0GVM5 59 aa6.84□□□□□ -1.31
SNRPA1-211ENST00000560433 KRTAP4-16G5E9R7 235 aaPredicted RBP6.84□□□□□ -1.31
SNRPA1-211ENST00000560433 SNCGO76070 127 aa6.84□□□□□ -1.31
SNRPA1-211ENST00000560433 KRTAP10-2P60368 255 aa6.84□□□□□ -1.31
SNRPA1-211ENST00000560433 UBE2BP63146 152 aa6.84□□□□□ -1.31
SNRPA1-211ENST00000560433 PRLHP81277 87 aa6.84□□□□□ -1.32
SNRPA1-211ENST00000560433 REG3GQ6UW15 175 aa6.84□□□□□ -1.32
SNRPA1-211ENST00000560433 KMT2CQ8NEZ4 4911 aaKnown RBP6.83□□□□□ -1.32
SNRPA1-211ENST00000560433 B5MCH6 92 aa6.83□□□□□ -1.32
SNRPA1-211ENST00000560433 TMEM256-PLSCR3K7ERE1 68 aa6.83□□□□□ -1.32
SNRPA1-211ENST00000560433 PRYO14603 147 aa6.82□□□□□ -1.32
SNRPA1-211ENST00000560433 ERC2-IT1O76042 136 aa6.82□□□□□ -1.32
SNRPA1-211ENST00000560433 Q6ZRX8 168 aa6.82□□□□□ -1.32
SNRPA1-211ENST00000560433 ST20-AS1Q8NBB2 130 aa6.82□□□□□ -1.32
SNRPA1-211ENST00000560433 LAMTOR3Q9UHA4 124 aa6.82□□□□□ -1.32
SNRPA1-211ENST00000560433 TRBV7-6A0A0J9YX20 115 aa6.82□□□□□ -1.32
SNRPA1-211ENST00000560433 SPRR1AP35321 89 aa6.82□□□□□ -1.32
SNRPA1-211ENST00000560433 FAM19A1Q7Z5A9 133 aa6.81□□□□□ -1.32
SNRPA1-211ENST00000560433 SPACA4Q8TDM5 124 aa6.81□□□□□ -1.32
SNRPA1-211ENST00000560433 CDIP1Q9H305 208 aa6.81□□□□□ -1.32
SNRPA1-211ENST00000560433 HAMPP81172 84 aa6.81□□□□□ -1.32
SNRPA1-211ENST00000560433 GAGE2AQ6NT46 116 aa6.81□□□□□ -1.32
SNRPA1-211ENST00000560433 C3orf22Q8N5N4 141 aa6.81□□□□□ -1.32
SNRPA1-211ENST00000560433 PKHD1P08F94 4074 aa6.8□□□□□ -1.32
SNRPA1-211ENST00000560433 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.79□□□□□ -1.32
SNRPA1-211ENST00000560433 HIGD2AQ9BW72 106 aa6.79□□□□□ -1.32
SNRPA1-211ENST00000560433 LINC00474Q9P2X8 69 aa6.79□□□□□ -1.32
SNRPA1-211ENST00000560433 OBSCN-AS1Q96MR7 158 aa6.78□□□□□ -1.32
SNRPA1-211ENST00000560433 SMCR5Q8TEV8 140 aa6.78□□□□□ -1.32
SNRPA1-211ENST00000560433 FAM30AQ9NZY2 134 aa6.78□□□□□ -1.32
SNRPA1-211ENST00000560433 INAFM2P0DMQ5 153 aa6.77□□□□□ -1.33
SNRPA1-211ENST00000560433 XGP55808 180 aa6.77□□□□□ -1.33
SNRPA1-211ENST00000560433 Q8N377 158 aa6.76□□□□□ -1.33
SNRPA1-211ENST00000560433 MT-ATP8P03928 68 aa6.76□□□□□ -1.33
SNRPA1-211ENST00000560433 LINC01547P58512 204 aaPredicted RBP6.76□□□□□ -1.33
SNRPA1-211ENST00000560433 RBM3P98179 157 aaKnown RBP6.76□□□□□ -1.33
SNRPA1-211ENST00000560433 DHRS4-AS1Q9P1J3 65 aa6.76□□□□□ -1.33
SNRPA1-211ENST00000560433 NDUFV3P56181 108 aaKnown RBP6.75□□□□□ -1.33
SNRPA1-211ENST00000560433 EPM2AB3EWF7 344 aa6.75□□□□□ -1.33
SNRPA1-211ENST00000560433 JMJD7-PLA2G4BH0Y9G9 81 aa6.75□□□□□ -1.33
SNRPA1-211ENST00000560433 PKIGQ9Y2B9 76 aa6.74□□□□□ -1.33
SNRPA1-211ENST00000560433 RYR2Q92736 4967 aa6.73□□□□□ -1.33
SNRPA1-211ENST00000560433 LRP1BQ9NZR2 4599 aa6.73□□□□□ -1.33
SNRPA1-211ENST00000560433 UBE2AP49459 152 aa6.73□□□□□ -1.33
SNRPA1-211ENST00000560433 KRTAP10-1P60331 282 aa6.72□□□□□ -1.33
SNRPA1-211ENST00000560433 SIGMAR1Q99720 223 aa6.72□□□□□ -1.33
SNRPA1-211ENST00000560433 LINC00846Q9NV44 126 aa6.72□□□□□ -1.33
SNRPA1-211ENST00000560433 A0A0G2JQZ4 141 aa6.71□□□□□ -1.33
SNRPA1-211ENST00000560433 DSCR8Q96T75 97 aa6.71□□□□□ -1.33
SNRPA1-211ENST00000560433 LCE6AA0A183 80 aa6.71□□□□□ -1.34
SNRPA1-211ENST00000560433 CCKP06307 115 aa6.71□□□□□ -1.34
SNRPA1-211ENST00000560433 PLAC8Q9NZF1 115 aa6.71□□□□□ -1.34
SNRPA1-211ENST00000560433 PSORS1C2Q9UIG4 136 aa6.71□□□□□ -1.34
SNRPA1-211ENST00000560433 Q6ZQT0 140 aa6.7□□□□□ -1.34
SNRPA1-211ENST00000560433 CIRBP-AS1Q8TBR5 109 aa6.7□□□□□ -1.34
SNRPA1-211ENST00000560433 FAM240AA0A1B0GVK7 77 aa6.69□□□□□ -1.34
SNRPA1-211ENST00000560433 C1orf137Q5JT78 98 aa6.69□□□□□ -1.34
SNRPA1-211ENST00000560433 BCE1O60756 84 aa6.69□□□□□ -1.34
SNRPA1-211ENST00000560433 SCXQ7RTU7 201 aa6.68□□□□□ -1.34
SNRPA1-211ENST00000560433 IGLV5-48A0A075B6I7 105 aa6.68□□□□□ -1.34
SNRPA1-211ENST00000560433 GHRHP01286 108 aa6.68□□□□□ -1.34
SNRPA1-211ENST00000560433 TRBV7-4A0A0J9YYF1 115 aa6.67□□□□□ -1.34
SNRPA1-211ENST00000560433 SMIM29Q86T20 159 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms