RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 PPDPFLQ8WWR9 84 aa7.96□□□□□ -1.14
SHMT2-233ENST00000557529 hADV29S1A0JD25 119 aa7.95□□□□□ -1.14
SHMT2-233ENST00000557529 ORMDL1Q9P0S3 153 aa7.95□□□□□ -1.14
SHMT2-233ENST00000557529 DNAH6Q9C0G6 4158 aa7.95□□□□□ -1.14
SHMT2-233ENST00000557529 RTL8CO15255 209 aa7.94□□□□□ -1.14
SHMT2-233ENST00000557529 DNAH10Q8IVF4 4471 aa7.93□□□□□ -1.14
SHMT2-233ENST00000557529 A0A1W2PNN7 141 aa7.93□□□□□ -1.14
SHMT2-233ENST00000557529 RPL37AP8A6NKH3 93 aa7.93□□□□□ -1.14
SHMT2-233ENST00000557529 CHTF8P0CG12 524 aa7.93□□□□□ -1.14
SHMT2-233ENST00000557529 H3BQ85 93 aa7.92□□□□□ -1.14
SHMT2-233ENST00000557529 LINC00528Q8N1L1 170 aa7.92□□□□□ -1.14
SHMT2-233ENST00000557529 IGLV5-52A0A0A0MRZ9 124 aa7.91□□□□□ -1.14
SHMT2-233ENST00000557529 GHRHP01286 108 aa7.91□□□□□ -1.14
SHMT2-233ENST00000557529 INAFM2P0DMQ5 153 aa7.91□□□□□ -1.14
SHMT2-233ENST00000557529 SPRR1AP35321 89 aa7.91□□□□□ -1.14
SHMT2-233ENST00000557529 TNP2Q05952 138 aa7.91□□□□□ -1.14
SHMT2-233ENST00000557529 ETDCA0A1B0GVM5 59 aa7.9□□□□□ -1.14
SHMT2-233ENST00000557529 TMEM256-PLSCR3K7ERE1 68 aa7.9□□□□□ -1.14
SHMT2-233ENST00000557529 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.9□□□□□ -1.14
SHMT2-233ENST00000557529 REG3GQ6UW15 175 aa7.89□□□□□ -1.15
SHMT2-233ENST00000557529 SPACA4Q8TDM5 124 aa7.89□□□□□ -1.15
SHMT2-233ENST00000557529 TEX49A0A1B0GTD5 131 aa7.88□□□□□ -1.15
SHMT2-233ENST00000557529 KRTAP4-16G5E9R7 235 aaPredicted RBP7.88□□□□□ -1.15
SHMT2-233ENST00000557529 DPH3Q96FX2 82 aa7.88□□□□□ -1.15
SHMT2-233ENST00000557529 DHRS4-AS1Q9P1J3 65 aa7.88□□□□□ -1.15
SHMT2-233ENST00000557529 B5MCH6 92 aa7.87□□□□□ -1.15
SHMT2-233ENST00000557529 Q6ZQY7 126 aa7.87□□□□□ -1.15
SHMT2-233ENST00000557529 Q6ZRX8 168 aa7.87□□□□□ -1.15
SHMT2-233ENST00000557529 LCE6AA0A183 80 aa7.86□□□□□ -1.15
SHMT2-233ENST00000557529 EPM2AB3EWF7 344 aa7.86□□□□□ -1.15
SHMT2-233ENST00000557529 UBE2BP63146 152 aa7.86□□□□□ -1.15
SHMT2-233ENST00000557529 PHF5AQ7RTV0 110 aaKnown RBP7.86□□□□□ -1.15
SHMT2-233ENST00000557529 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.86□□□□□ -1.15
SHMT2-233ENST00000557529 PANO1I0J062 215 aa7.85□□□□□ -1.15
SHMT2-233ENST00000557529 OBSCN-AS1Q96MR7 158 aa7.84□□□□□ -1.15
SHMT2-233ENST00000557529 JMJD7-PLA2G4BH0Y9G9 81 aa7.84□□□□□ -1.16
SHMT2-233ENST00000557529 FUSP35637 526 aaKnown RBP eCLIP7.84□□□□□ -1.16
SHMT2-233ENST00000557529 KMT2AQ03164 3969 aa7.83□□□□□ -1.16
SHMT2-233ENST00000557529 DNAH2Q9P225 4427 aa7.83□□□□□ -1.16
SHMT2-233ENST00000557529 FAM19A1Q7Z5A9 133 aa7.82□□□□□ -1.16
SHMT2-233ENST00000557529 Q9BRP9 147 aa7.82□□□□□ -1.16
SHMT2-233ENST00000557529 PLAC8Q9NZF1 115 aa7.82□□□□□ -1.16
SHMT2-233ENST00000557529 DNAH17Q9UFH2 4485 aa7.81□□□□□ -1.16
SHMT2-233ENST00000557529 VPS25Q9BRG1 176 aa7.81□□□□□ -1.16
SHMT2-233ENST00000557529 H0Y9J4 135 aa7.8□□□□□ -1.16
SHMT2-233ENST00000557529 KRTAP10-2P60368 255 aa7.8□□□□□ -1.16
SHMT2-233ENST00000557529 LAMTOR3Q9UHA4 124 aa7.8□□□□□ -1.16
SHMT2-233ENST00000557529 FAM240AA0A1B0GVK7 77 aa7.79□□□□□ -1.16
SHMT2-233ENST00000557529 LINC00336Q6ZUF6 198 aa7.79□□□□□ -1.16
SHMT2-233ENST00000557529 KRTAP11-1Q8IUC1 163 aa7.78□□□□□ -1.16
SHMT2-233ENST00000557529 C14orf132Q9NPU4 83 aa7.78□□□□□ -1.16
SHMT2-233ENST00000557529 BCE1O60756 84 aa7.77□□□□□ -1.17
SHMT2-233ENST00000557529 ACYP1P07311 99 aa7.77□□□□□ -1.17
SHMT2-233ENST00000557529 PRLHP81277 87 aa7.77□□□□□ -1.17
SHMT2-233ENST00000557529 RBM3P98179 157 aaKnown RBP7.77□□□□□ -1.17
SHMT2-233ENST00000557529 SMCR5Q8TEV8 140 aa7.77□□□□□ -1.17
SHMT2-233ENST00000557529 IGLV5-48A0A075B6I7 105 aa7.76□□□□□ -1.17
SHMT2-233ENST00000557529 UBE2AP49459 152 aa7.76□□□□□ -1.17
SHMT2-233ENST00000557529 NDUFV3P56181 108 aaKnown RBP7.76□□□□□ -1.17
SHMT2-233ENST00000557529 ERC2-IT1O76042 136 aa7.75□□□□□ -1.17
SHMT2-233ENST00000557529 A0A1B0GV72 72 aa7.74□□□□□ -1.17
SHMT2-233ENST00000557529 PDE6GP18545 87 aa7.74□□□□□ -1.17
SHMT2-233ENST00000557529 LINC01547P58512 204 aaPredicted RBP7.74□□□□□ -1.17
SHMT2-233ENST00000557529 GAGE2AQ6NT46 116 aa7.74□□□□□ -1.17
SHMT2-233ENST00000557529 Q8N377 158 aa7.74□□□□□ -1.17
SHMT2-233ENST00000557529 DEFB105AQ8NG35 78 aa7.74□□□□□ -1.17
SHMT2-233ENST00000557529 HIGD2AQ9BW72 106 aa7.74□□□□□ -1.17
SHMT2-233ENST00000557529 LOC110117498A0A087WWA1 95 aa7.73□□□□□ -1.17
SHMT2-233ENST00000557529 C21orf62-AS1Q17RA5 79 aa7.73□□□□□ -1.17
SHMT2-233ENST00000557529 ST20-AS1Q8NBB2 130 aa7.73□□□□□ -1.17
SHMT2-233ENST00000557529 DSCR8Q96T75 97 aa7.73□□□□□ -1.17
SHMT2-233ENST00000557529 HECTD4Q9Y4D8 3996 aa7.73□□□□□ -1.17
SHMT2-233ENST00000557529 CCKP06307 115 aa7.72□□□□□ -1.17
SHMT2-233ENST00000557529 Q6ZSA8 131 aa7.72□□□□□ -1.17
SHMT2-233ENST00000557529 CDIP1Q9H305 208 aa7.72□□□□□ -1.17
SHMT2-233ENST00000557529 KRTAP10-1P60331 282 aa7.71□□□□□ -1.17
SHMT2-233ENST00000557529 KRTAP13-1Q8IUC0 172 aa7.71□□□□□ -1.17
SHMT2-233ENST00000557529 FRAS1Q86XX4 4008 aa7.7□□□□□ -1.18
SHMT2-233ENST00000557529 Q6ZQT0 140 aa7.7□□□□□ -1.18
SHMT2-233ENST00000557529 CIRBP-AS1Q8TBR5 109 aa7.7□□□□□ -1.18
SHMT2-233ENST00000557529 FAM30AQ9NZY2 134 aa7.7□□□□□ -1.18
SHMT2-233ENST00000557529 PSORS1C2Q9UIG4 136 aa7.7□□□□□ -1.18
SHMT2-233ENST00000557529 HYDINQ4G0P3 5121 aa7.69□□□□□ -1.18
SHMT2-233ENST00000557529 TRBV7-4A0A0J9YYF1 115 aa7.69□□□□□ -1.18
SHMT2-233ENST00000557529 C1orf137Q5JT78 98 aa7.68□□□□□ -1.18
SHMT2-233ENST00000557529 SCXQ7RTU7 201 aa7.68□□□□□ -1.18
SHMT2-233ENST00000557529 SACSQ9NZJ4 4579 aa7.68□□□□□ -1.18
SHMT2-233ENST00000557529 DNAH11Q96DT5 4516 aa7.68□□□□□ -1.18
SHMT2-233ENST00000557529 SPRR1BP22528 89 aa7.67□□□□□ -1.18
SHMT2-233ENST00000557529 SIGMAR1Q99720 223 aa7.67□□□□□ -1.18
SHMT2-233ENST00000557529 F8WEM9 126 aa7.66□□□□□ -1.18
SHMT2-233ENST00000557529 ZNF861PO60384 105 aa7.65□□□□□ -1.18
SHMT2-233ENST00000557529 XGP55808 180 aa7.65□□□□□ -1.18
SHMT2-233ENST00000557529 C3orf22Q8N5N4 141 aa7.65□□□□□ -1.18
SHMT2-233ENST00000557529 SMIM29Q86T20 159 aa7.64□□□□□ -1.19
SHMT2-233ENST00000557529 ZNF706Q9Y5V0 76 aaPredicted RBP7.64□□□□□ -1.19
SHMT2-233ENST00000557529 FAT2Q9NYQ8 4349 aa7.64□□□□□ -1.19
SHMT2-233ENST00000557529 A0A1B0GVY2 172 aa7.63□□□□□ -1.19
SHMT2-233ENST00000557529 LINC00846Q9NV44 126 aa7.63□□□□□ -1.19
SHMT2-233ENST00000557529 IGLV7-43P04211 117 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms