RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 SMIM1B2RUZ4 78 aa5.12□□□□□ -1.59
HNRNPC-227ENST00000556897 F8W1H4 67 aa5.12□□□□□ -1.59
HNRNPC-227ENST00000556897 FABP2P12104 132 aa5.12□□□□□ -1.59
HNRNPC-227ENST00000556897 ORMDL2Q53FV1 153 aa5.12□□□□□ -1.59
HNRNPC-227ENST00000556897 FP248Q71RG6 208 aaPredicted RBP5.12□□□□□ -1.59
HNRNPC-227ENST00000556897 ATP5L2Q7Z4Y8 100 aa5.12□□□□□ -1.59
HNRNPC-227ENST00000556897 COX7B2Q8TF08 81 aa5.12□□□□□ -1.59
HNRNPC-227ENST00000556897 PLEKHB2Q96CS7 222 aa5.12□□□□□ -1.59
HNRNPC-227ENST00000556897 A0A1W2PPM0 123 aa5.11□□□□□ -1.59
HNRNPC-227ENST00000556897 RPL24P83731 157 aaKnown RBP5.11□□□□□ -1.59
HNRNPC-227ENST00000556897 PAPPA-AS1Q5QFB9 102 aa5.11□□□□□ -1.59
HNRNPC-227ENST00000556897 SPAG11AQ6PDA7 123 aa5.11□□□□□ -1.59
HNRNPC-227ENST00000556897 TMEM126AQ9H061 195 aa5.11□□□□□ -1.59
HNRNPC-227ENST00000556897 SPCS1Q9Y6A9 102 aa5.11□□□□□ -1.59
HNRNPC-227ENST00000556897 SYS1-DBNDD2H3BUS1 97 aa5.1□□□□□ -1.59
HNRNPC-227ENST00000556897 PRYO14603 147 aa5.1□□□□□ -1.59
HNRNPC-227ENST00000556897 TIMM17AQ99595 171 aa5.1□□□□□ -1.59
HNRNPC-227ENST00000556897 HSPB8Q9UJY1 196 aa5.1□□□□□ -1.59
HNRNPC-227ENST00000556897 ERG28Q9UKR5 140 aa5.1□□□□□ -1.59
HNRNPC-227ENST00000556897 K7EMI3 77 aa5.09□□□□□ -1.59
HNRNPC-227ENST00000556897 M0R378 163 aa5.09□□□□□ -1.59
HNRNPC-227ENST00000556897 SEC61BP60468 96 aaKnown RBP5.09□□□□□ -1.59
HNRNPC-227ENST00000556897 LINC01545Q5VT33 79 aa5.09□□□□□ -1.59
HNRNPC-227ENST00000556897 C2orf91Q6ZV80 131 aa5.09□□□□□ -1.59
HNRNPC-227ENST00000556897 MAP1LC3CQ9BXW4 147 aa5.09□□□□□ -1.59
HNRNPC-227ENST00000556897 IGLV5-45A0A087WSX0 123 aa5.08□□□□□ -1.6
HNRNPC-227ENST00000556897 TINCRA0A1B0GVN0 87 aa5.08□□□□□ -1.6
HNRNPC-227ENST00000556897 H3BUT2 72 aa5.08□□□□□ -1.6
HNRNPC-227ENST00000556897 ATP5LO75964 103 aa5.08□□□□□ -1.6
HNRNPC-227ENST00000556897 SPINK8P0C7L1 97 aa5.08□□□□□ -1.6
HNRNPC-227ENST00000556897 VPREB1P12018 145 aa5.08□□□□□ -1.6
HNRNPC-227ENST00000556897 PFN2P35080 140 aa5.08□□□□□ -1.6
HNRNPC-227ENST00000556897 ATOH7Q8N100 152 aa5.08□□□□□ -1.6
HNRNPC-227ENST00000556897 TOMM6Q96B49 74 aa5.08□□□□□ -1.6
HNRNPC-227ENST00000556897 HIGD2AQ9BW72 106 aa5.08□□□□□ -1.6
HNRNPC-227ENST00000556897 NXT2Q9NPJ8 142 aaKnown RBP5.08□□□□□ -1.6
HNRNPC-227ENST00000556897 SPANXB1Q9NS25 103 aaPredicted RBP5.08□□□□□ -1.6
HNRNPC-227ENST00000556897 BOD1L2Q8IYS8 172 aa5.07□□□□□ -1.6
HNRNPC-227ENST00000556897 FAM19A2Q8N3H0 131 aa5.07□□□□□ -1.6
HNRNPC-227ENST00000556897 DAND5Q8N907 189 aa5.07□□□□□ -1.6
HNRNPC-227ENST00000556897 Q8NBF4 154 aa5.07□□□□□ -1.6
HNRNPC-227ENST00000556897 SPRR4Q96PI1 79 aa5.07□□□□□ -1.6
HNRNPC-227ENST00000556897 SCGB3A1Q96QR1 104 aa5.07□□□□□ -1.6
HNRNPC-227ENST00000556897 SND1-IT1Q9HBX3 110 aa5.07□□□□□ -1.6
HNRNPC-227ENST00000556897 HIGD1BQ9P298 99 aa5.07□□□□□ -1.6
HNRNPC-227ENST00000556897 LEPROTL1O95214 131 aa5.06□□□□□ -1.6
HNRNPC-227ENST00000556897 SMIM13P0DJ93 91 aa5.06□□□□□ -1.6
HNRNPC-227ENST00000556897 Q8NDZ9 215 aa5.06□□□□□ -1.6
HNRNPC-227ENST00000556897 SPANXCQ9NY87 97 aa5.05□□□□□ -1.6
HNRNPC-227ENST00000556897 HERV-K104P63124 156 aa5.04□□□□□ -1.6
HNRNPC-227ENST00000556897 KIAA1644Q3SXP7 199 aa5.04□□□□□ -1.6
HNRNPC-227ENST00000556897 E9PLD3 99 aa5.03□□□□□ -1.6
HNRNPC-227ENST00000556897 SPINK1P00995 79 aa5.03□□□□□ -1.6
HNRNPC-227ENST00000556897 TAL2Q16559 108 aa5.03□□□□□ -1.6
HNRNPC-227ENST00000556897 SPANXDQ9BXN6 97 aa5.03□□□□□ -1.6
HNRNPC-227ENST00000556897 ZNF706Q9Y5V0 76 aaPredicted RBP5.03□□□□□ -1.6
HNRNPC-227ENST00000556897 IGLV5-39A0A0G2JS06 123 aa5.02□□□□□ -1.61
HNRNPC-227ENST00000556897 H3BMG7 143 aa5.02□□□□□ -1.61
HNRNPC-227ENST00000556897 PMVKQ15126 192 aa5.02□□□□□ -1.61
HNRNPC-227ENST00000556897 Q6Q795 121 aa5.02□□□□□ -1.61
HNRNPC-227ENST00000556897 URB1-AS1Q96HZ7 61 aa5.02□□□□□ -1.61
HNRNPC-227ENST00000556897 ZNF625Q96I27 306 aaPredicted RBP5.02□□□□□ -1.61
HNRNPC-227ENST00000556897 ANAPC13Q9BS18 74 aa5.02□□□□□ -1.61
HNRNPC-227ENST00000556897 NDUFA12Q9UI09 145 aa5.02□□□□□ -1.61
HNRNPC-227ENST00000556897 MT1HP80294 61 aa5.01□□□□□ -1.61
HNRNPC-227ENST00000556897 COX17Q14061 63 aa5.01□□□□□ -1.61
HNRNPC-227ENST00000556897 KRTAP19-2Q3LHN2 52 aa5.01□□□□□ -1.61
HNRNPC-227ENST00000556897 SS18L2Q9UHA2 77 aa5.01□□□□□ -1.61
HNRNPC-227ENST00000556897 C5orf47Q569G3 176 aa5□□□□□ -1.61
HNRNPC-227ENST00000556897 Q8N377 158 aa5□□□□□ -1.61
HNRNPC-227ENST00000556897 KRTAP4-12Q9BQ66 201 aa5□□□□□ -1.61
HNRNPC-227ENST00000556897 PRO0461Q9UI25 63 aa5□□□□□ -1.61
HNRNPC-227ENST00000556897 A0A0A0MQY5 61 aa4.99□□□□□ -1.61
HNRNPC-227ENST00000556897 LINC01549A6NIU2 74 aa4.99□□□□□ -1.61
HNRNPC-227ENST00000556897 LYRM7Q5U5X0 104 aa4.99□□□□□ -1.61
HNRNPC-227ENST00000556897 KRTAP19-1Q8IUB9 90 aa4.99□□□□□ -1.61
HNRNPC-227ENST00000556897 SMCR5Q8TEV8 140 aa4.99□□□□□ -1.61
HNRNPC-227ENST00000556897 PPDPFLQ8WWR9 84 aa4.99□□□□□ -1.61
HNRNPC-227ENST00000556897 A0A1B0GWB2 263 aa4.98□□□□□ -1.61
HNRNPC-227ENST00000556897 LINC01546A6NGU7 62 aa4.98□□□□□ -1.61
HNRNPC-227ENST00000556897 CFC1BP0CG36 223 aa4.98□□□□□ -1.61
HNRNPC-227ENST00000556897 ZNF22P17026 224 aaPredicted RBP4.98□□□□□ -1.61
HNRNPC-227ENST00000556897 MOBPQ13875 183 aa4.98□□□□□ -1.61
HNRNPC-227ENST00000556897 LINC00483Q53H64 154 aa4.98□□□□□ -1.61
HNRNPC-227ENST00000556897 GAGE2AQ6NT46 116 aa4.98□□□□□ -1.61
HNRNPC-227ENST00000556897 IGLV9-49A0A0B4J1Y8 123 aa4.97□□□□□ -1.61
HNRNPC-227ENST00000556897 A0A0U1RRA0 63 aa4.97□□□□□ -1.61
HNRNPC-227ENST00000556897 SLC25A20O43772 301 aa4.97□□□□□ -1.61
HNRNPC-227ENST00000556897 LINC00158P58513 81 aa4.97□□□□□ -1.61
HNRNPC-227ENST00000556897 RPS29P62273 56 aaKnown RBP4.97□□□□□ -1.61
HNRNPC-227ENST00000556897 ETDBQ3ZM63 59 aa4.97□□□□□ -1.61
HNRNPC-227ENST00000556897 SPRR1AP35321 89 aa4.96□□□□□ -1.62
HNRNPC-227ENST00000556897 SFTA2Q6UW10 78 aa4.96□□□□□ -1.62
HNRNPC-227ENST00000556897 CEND1Q8N111 149 aa4.96□□□□□ -1.62
HNRNPC-227ENST00000556897 SMIM20Q8N5G0 67 aa4.96□□□□□ -1.62
HNRNPC-227ENST00000556897 RAB37Q96AX2 223 aa4.96□□□□□ -1.62
HNRNPC-227ENST00000556897 KCNQ1DNQ9H478 68 aa4.96□□□□□ -1.62
HNRNPC-227ENST00000556897 ETDCA0A1B0GVM5 59 aa4.95□□□□□ -1.62
HNRNPC-227ENST00000556897 KRTAP4-16G5E9R7 235 aaPredicted RBP4.95□□□□□ -1.62
HNRNPC-227ENST00000556897 NCR3O14931 201 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms