RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 Q5XG85 94 aa11.89□□□□□ -0.51
SDR39U1-220ENST00000556548 TRAV23DV6A0A075B6W5 121 aa11.89□□□□□ -0.51
SDR39U1-220ENST00000556548 SERTAD4-AS1Q5TG53 156 aa11.89□□□□□ -0.51
SDR39U1-220ENST00000556548 HRCT1Q6UXD1 115 aa11.89□□□□□ -0.51
SDR39U1-220ENST00000556548 DSCR8Q96T75 97 aa11.89□□□□□ -0.51
SDR39U1-220ENST00000556548 Q8N814 137 aa11.88□□□□□ -0.51
SDR39U1-220ENST00000556548 FAM168BA1KXE4 195 aa11.87□□□□□ -0.51
SDR39U1-220ENST00000556548 M0R378 163 aa11.87□□□□□ -0.51
SDR39U1-220ENST00000556548 FBN3Q75N90 2809 aa11.87□□□□□ -0.51
SDR39U1-220ENST00000556548 M0R2N4 97 aa11.86□□□□□ -0.51
SDR39U1-220ENST00000556548 NBDYA0A0U1RRE5 68 aa11.86□□□□□ -0.51
SDR39U1-220ENST00000556548 TLX1NBP0CAT3 122 aa11.86□□□□□ -0.51
SDR39U1-220ENST00000556548 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.85□□□□□ -0.51
SDR39U1-220ENST00000556548 ZNF73O43830 326 aaPredicted RBP11.84□□□□□ -0.51
SDR39U1-220ENST00000556548 LINC00575Q6W349 94 aa11.84□□□□□ -0.51
SDR39U1-220ENST00000556548 NKAPP1Q8N9T2 125 aa11.84□□□□□ -0.51
SDR39U1-220ENST00000556548 DIRC1Q969H9 104 aa11.84□□□□□ -0.51
SDR39U1-220ENST00000556548 ORMDL1Q9P0S3 153 aa11.83□□□□□ -0.51
SDR39U1-220ENST00000556548 TGP01266 2768 aa11.82□□□□□ -0.52
SDR39U1-220ENST00000556548 Q6JHZ5 121 aa11.81□□□□□ -0.52
SDR39U1-220ENST00000556548 C7orf33Q8WU49 177 aa11.8□□□□□ -0.52
SDR39U1-220ENST00000556548 VPS13DQ5THJ4 4388 aa11.8□□□□□ -0.52
SDR39U1-220ENST00000556548 LINC00167Q96N53 147 aa11.8□□□□□ -0.52
SDR39U1-220ENST00000556548 RPL37AP8A6NKH3 93 aa11.79□□□□□ -0.52
SDR39U1-220ENST00000556548 COX7BP24311 80 aa11.78□□□□□ -0.52
SDR39U1-220ENST00000556548 KRTAP7-1Q8IUC3 87 aa11.78□□□□□ -0.52
SDR39U1-220ENST00000556548 IGKV2-24A0A0C4DH68 120 aa11.77□□□□□ -0.52
SDR39U1-220ENST00000556548 KMT2AQ03164 3969 aa11.77□□□□□ -0.53
SDR39U1-220ENST00000556548 IGKV3D-7A0A0C4DH55 119 aa11.77□□□□□ -0.53
SDR39U1-220ENST00000556548 C14orf132Q9NPU4 83 aa11.76□□□□□ -0.53
SDR39U1-220ENST00000556548 ELOF1P60002 83 aaKnown RBP11.76□□□□□ -0.53
SDR39U1-220ENST00000556548 KRTAP21-3Q3LHN1 58 aa11.75□□□□□ -0.53
SDR39U1-220ENST00000556548 PRO0628Q9UI54 55 aa11.75□□□□□ -0.53
SDR39U1-220ENST00000556548 A0A096LNI7 61 aa11.75□□□□□ -0.53
SDR39U1-220ENST00000556548 CNBPP62633 177 aaKnown RBP11.75□□□□□ -0.53
SDR39U1-220ENST00000556548 Q6ZQY7 126 aa11.75□□□□□ -0.53
SDR39U1-220ENST00000556548 A0A087WVE0 104 aa11.74□□□□□ -0.53
SDR39U1-220ENST00000556548 LRCOL1A6NCL2 159 aa11.74□□□□□ -0.53
SDR39U1-220ENST00000556548 Q6ZRN7 208 aaPredicted RBP11.74□□□□□ -0.53
SDR39U1-220ENST00000556548 PLA2G2DQ9UNK4 145 aa11.74□□□□□ -0.53
SDR39U1-220ENST00000556548 TMEM256-PLSCR3K7ERE1 68 aa11.73□□□□□ -0.53
SDR39U1-220ENST00000556548 C14orf177Q52M58 125 aa11.72□□□□□ -0.53
SDR39U1-220ENST00000556548 KCNQ1DNQ9H478 68 aa11.72□□□□□ -0.53
SDR39U1-220ENST00000556548 LINC00846Q9NV44 126 aa11.72□□□□□ -0.53
SDR39U1-220ENST00000556548 CHTF8P0CG12 524 aa11.7□□□□□ -0.54
SDR39U1-220ENST00000556548 MRPL55Q7Z7F7 128 aaKnown RBP11.7□□□□□ -0.54
SDR39U1-220ENST00000556548 LINC00528Q8N1L1 170 aa11.7□□□□□ -0.54
SDR39U1-220ENST00000556548 OBSCN-AS1Q96MR7 158 aa11.7□□□□□ -0.54
SDR39U1-220ENST00000556548 IGLV1-50A0A075B6I6 118 aa11.69□□□□□ -0.54
SDR39U1-220ENST00000556548 IGLV5-37A0A075B6J1 123 aa11.69□□□□□ -0.54
SDR39U1-220ENST00000556548 TRBV7-6A0A0J9YX20 115 aa11.69□□□□□ -0.54
SDR39U1-220ENST00000556548 C16orf90A8MZG2 172 aa11.69□□□□□ -0.54
SDR39U1-220ENST00000556548 A0A1W2PNN7 141 aa11.68□□□□□ -0.54
SDR39U1-220ENST00000556548 DNAH2Q9P225 4427 aa11.67□□□□□ -0.54
SDR39U1-220ENST00000556548 FUSP35637 526 aaKnown RBP eCLIP11.67□□□□□ -0.54
SDR39U1-220ENST00000556548 LAMTOR3Q9UHA4 124 aa11.66□□□□□ -0.54
SDR39U1-220ENST00000556548 LINC00336Q6ZUF6 198 aa11.66□□□□□ -0.54
SDR39U1-220ENST00000556548 EPM2AB3EWF7 344 aa11.65□□□□□ -0.54
SDR39U1-220ENST00000556548 LY6G6CO95867 125 aa11.65□□□□□ -0.54
SDR39U1-220ENST00000556548 FAM236DA0A1B0GTK5 79 aa11.65□□□□□ -0.54
SDR39U1-220ENST00000556548 FAM236CP0DP71 79 aa11.65□□□□□ -0.54
SDR39U1-220ENST00000556548 GHRHP01286 108 aa11.64□□□□□ -0.55
SDR39U1-220ENST00000556548 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.64□□□□□ -0.55
SDR39U1-220ENST00000556548 SERP1Q9Y6X1 66 aa11.64□□□□□ -0.55
SDR39U1-220ENST00000556548 C9orf163Q8N9P6 203 aa11.63□□□□□ -0.55
SDR39U1-220ENST00000556548 JMJD7-PLA2G4BH0Y9G9 81 aa11.63□□□□□ -0.55
SDR39U1-220ENST00000556548 PRYO14603 147 aa11.63□□□□□ -0.55
SDR39U1-220ENST00000556548 ETDCA0A1B0GVM5 59 aa11.62□□□□□ -0.55
SDR39U1-220ENST00000556548 Q6ZR54 194 aa11.61□□□□□ -0.55
SDR39U1-220ENST00000556548 A0A087WTM6 91 aa11.6□□□□□ -0.55
SDR39U1-220ENST00000556548 KRTAP4-16G5E9R7 235 aaPredicted RBP11.6□□□□□ -0.55
SDR39U1-220ENST00000556548 DEFB105AQ8NG35 78 aa11.6□□□□□ -0.55
SDR39U1-220ENST00000556548 ATP5EP2Q5VTU8 51 aa11.6□□□□□ -0.55
SDR39U1-220ENST00000556548 Q6ZRX8 168 aa11.59□□□□□ -0.55
SDR39U1-220ENST00000556548 C20orf197Q8N268 126 aa11.59□□□□□ -0.55
SDR39U1-220ENST00000556548 Q9BRP9 147 aa11.59□□□□□ -0.55
SDR39U1-220ENST00000556548 PANO1I0J062 215 aa11.59□□□□□ -0.55
SDR39U1-220ENST00000556548 SPRR1AP35321 89 aa11.59□□□□□ -0.55
SDR39U1-220ENST00000556548 RBM3P98179 157 aaKnown RBP11.59□□□□□ -0.55
SDR39U1-220ENST00000556548 HECTD4Q9Y4D8 3996 aa11.59□□□□□ -0.55
SDR39U1-220ENST00000556548 PHF5AQ7RTV0 110 aaKnown RBP11.58□□□□□ -0.56
SDR39U1-220ENST00000556548 REG3GQ6UW15 175 aa11.58□□□□□ -0.56
SDR39U1-220ENST00000556548 WWC2-AS2Q96NR7 200 aa11.57□□□□□ -0.56
SDR39U1-220ENST00000556548 CCKP06307 115 aa11.57□□□□□ -0.56
SDR39U1-220ENST00000556548 UBE2BP63146 152 aa11.54□□□□□ -0.56
SDR39U1-220ENST00000556548 KRTAP11-1Q8IUC1 163 aa11.54□□□□□ -0.56
SDR39U1-220ENST00000556548 H7BZZ5 65 aa11.54□□□□□ -0.56
SDR39U1-220ENST00000556548 C1orf134Q5TEV5 83 aa11.54□□□□□ -0.56
SDR39U1-220ENST00000556548 ST20-AS1Q8NBB2 130 aa11.54□□□□□ -0.56
SDR39U1-220ENST00000556548 PKIGQ9Y2B9 76 aa11.54□□□□□ -0.56
SDR39U1-220ENST00000556548 SMIM26A0A096LP01 95 aa11.53□□□□□ -0.56
SDR39U1-220ENST00000556548 H3BQ85 93 aa11.53□□□□□ -0.56
SDR39U1-220ENST00000556548 ERC2-IT1O76042 136 aa11.53□□□□□ -0.56
SDR39U1-220ENST00000556548 DHRS4-AS1Q9P1J3 65 aa11.53□□□□□ -0.56
SDR39U1-220ENST00000556548 LINC00476Q8WZB0 136 aa11.52□□□□□ -0.57
SDR39U1-220ENST00000556548 PRLHP81277 87 aa11.51□□□□□ -0.57
SDR39U1-220ENST00000556548 Q6ZQT0 140 aa11.51□□□□□ -0.57
SDR39U1-220ENST00000556548 Q8N377 158 aa11.51□□□□□ -0.57
SDR39U1-220ENST00000556548 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.51□□□□□ -0.57
SDR39U1-220ENST00000556548 BCE1O60756 84 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms