RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 LINC00575Q6W349 94 aa5.38□□□□□ -1.55
ATXN3-235ENST00000556082 DYNC2H1Q8NCM8 4307 aaKnown RBP5.37□□□□□ -1.55
ATXN3-235ENST00000556082 TRAV23DV6A0A075B6W5 121 aa5.37□□□□□ -1.55
ATXN3-235ENST00000556082 FAM240AA0A1B0GVK7 77 aa5.37□□□□□ -1.55
ATXN3-235ENST00000556082 GAGE2EQ4V326 116 aa5.37□□□□□ -1.55
ATXN3-235ENST00000556082 C14orf177Q52M58 125 aa5.37□□□□□ -1.55
ATXN3-235ENST00000556082 OBSCN-AS1Q96MR7 158 aa5.37□□□□□ -1.55
ATXN3-235ENST00000556082 GAGE2DQ9UEU5 116 aa5.37□□□□□ -1.55
ATXN3-235ENST00000556082 NBDYA0A0U1RRE5 68 aa5.36□□□□□ -1.55
ATXN3-235ENST00000556082 LOC107984640A0A0U1RRK4 108 aa5.36□□□□□ -1.55
ATXN3-235ENST00000556082 ZNF73O43830 326 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-235ENST00000556082 INAFM2P0DMQ5 153 aa5.36□□□□□ -1.55
ATXN3-235ENST00000556082 ORMDL1Q9P0S3 153 aa5.36□□□□□ -1.55
ATXN3-235ENST00000556082 COL7A1Q02388 2944 aa5.35□□□□□ -1.55
ATXN3-235ENST00000556082 TMEM256-PLSCR3K7ERE1 68 aa5.35□□□□□ -1.55
ATXN3-235ENST00000556082 ACYP1P07311 99 aa5.35□□□□□ -1.55
ATXN3-235ENST00000556082 DIRC1Q969H9 104 aa5.35□□□□□ -1.55
ATXN3-235ENST00000556082 SIGMAR1Q99720 223 aa5.35□□□□□ -1.55
ATXN3-235ENST00000556082 KCNQ1DNQ9H478 68 aa5.35□□□□□ -1.55
ATXN3-235ENST00000556082 hADV29S1A0JD25 119 aa5.34□□□□□ -1.55
ATXN3-235ENST00000556082 COX7BP24311 80 aa5.34□□□□□ -1.55
ATXN3-235ENST00000556082 PSCAO43653 123 aa5.33□□□□□ -1.56
ATXN3-235ENST00000556082 ELOF1P60002 83 aaKnown RBP5.33□□□□□ -1.56
ATXN3-235ENST00000556082 SERTAD4-AS1Q5TG53 156 aa5.33□□□□□ -1.56
ATXN3-235ENST00000556082 NKAPP1Q8N9T2 125 aa5.33□□□□□ -1.56
ATXN3-235ENST00000556082 C7orf33Q8WU49 177 aa5.33□□□□□ -1.56
ATXN3-235ENST00000556082 PKIGQ9Y2B9 76 aa5.33□□□□□ -1.56
ATXN3-235ENST00000556082 DNAH1Q9P2D7 4330 aa5.32□□□□□ -1.56
ATXN3-235ENST00000556082 LRCOL1A6NCL2 159 aa5.32□□□□□ -1.56
ATXN3-235ENST00000556082 C16orf90A8MZG2 172 aa5.32□□□□□ -1.56
ATXN3-235ENST00000556082 JMJD7-PLA2G4BH0Y9G9 81 aa5.32□□□□□ -1.56
ATXN3-235ENST00000556082 C21orf62-AS1Q17RA5 79 aa5.32□□□□□ -1.56
ATXN3-235ENST00000556082 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-235ENST00000556082 Q6ZRN7 208 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-235ENST00000556082 IGLV1-50A0A075B6I6 118 aa5.31□□□□□ -1.56
ATXN3-235ENST00000556082 SCGB1A1P11684 91 aa5.31□□□□□ -1.56
ATXN3-235ENST00000556082 SPRR1AP35321 89 aa5.31□□□□□ -1.56
ATXN3-235ENST00000556082 GAGE2BQ13066 116 aa5.31□□□□□ -1.56
ATXN3-235ENST00000556082 PRYO14603 147 aa5.3□□□□□ -1.56
ATXN3-235ENST00000556082 SDIM1Q6ZPB5 146 aa5.3□□□□□ -1.56
ATXN3-235ENST00000556082 KRTAP7-1Q8IUC3 87 aa5.3□□□□□ -1.56
ATXN3-235ENST00000556082 KRTAP4-16G5E9R7 235 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-235ENST00000556082 Q6ZR54 194 aa5.29□□□□□ -1.56
ATXN3-235ENST00000556082 MRPL55Q7Z7F7 128 aaKnown RBP5.29□□□□□ -1.56
ATXN3-235ENST00000556082 C9orf163Q8N9P6 203 aa5.29□□□□□ -1.56
ATXN3-235ENST00000556082 MEGF8Q7Z7M0 2845 aa5.29□□□□□ -1.56
ATXN3-235ENST00000556082 FAM168BA1KXE4 195 aa5.28□□□□□ -1.56
ATXN3-235ENST00000556082 XGP55808 180 aa5.28□□□□□ -1.56
ATXN3-235ENST00000556082 DNHD1Q96M86 4753 aa5.28□□□□□ -1.56
ATXN3-235ENST00000556082 A0A096LNI7 61 aa5.27□□□□□ -1.57
ATXN3-235ENST00000556082 PDE6GP18545 87 aa5.27□□□□□ -1.57
ATXN3-235ENST00000556082 Q6ZQY7 126 aa5.27□□□□□ -1.57
ATXN3-235ENST00000556082 DHRS4-AS1Q9P1J3 65 aa5.27□□□□□ -1.57
ATXN3-235ENST00000556082 LINC00474Q9P2X8 69 aa5.27□□□□□ -1.57
ATXN3-235ENST00000556082 LOC110117498A0A087WWA1 95 aa5.26□□□□□ -1.57
ATXN3-235ENST00000556082 EPM2AB3EWF7 344 aa5.26□□□□□ -1.57
ATXN3-235ENST00000556082 MT-ATP8P03928 68 aa5.26□□□□□ -1.57
ATXN3-235ENST00000556082 CCKP06307 115 aa5.26□□□□□ -1.57
ATXN3-235ENST00000556082 Q6ZRX8 168 aa5.26□□□□□ -1.57
ATXN3-235ENST00000556082 C14orf132Q9NPU4 83 aa5.26□□□□□ -1.57
ATXN3-235ENST00000556082 A0A087WTM6 91 aa5.25□□□□□ -1.57
ATXN3-235ENST00000556082 PCP4P48539 62 aa5.25□□□□□ -1.57
ATXN3-235ENST00000556082 RBM3P98179 157 aaKnown RBP5.25□□□□□ -1.57
ATXN3-235ENST00000556082 PLECQ15149 4684 aaKnown RBP5.25□□□□□ -1.57
ATXN3-235ENST00000556082 Q6Q795 121 aa5.25□□□□□ -1.57
ATXN3-235ENST00000556082 FAM19A5Q7Z5A7 132 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-235ENST00000556082 LINC00643Q86TS7 51 aa5.25□□□□□ -1.57
ATXN3-235ENST00000556082 DNAH7Q8WXX0 4024 aa5.25□□□□□ -1.57
ATXN3-235ENST00000556082 PRKDCP78527 4128 aaKnown RBP5.25□□□□□ -1.57
ATXN3-235ENST00000556082 ETDCA0A1B0GVM5 59 aa5.24□□□□□ -1.57
ATXN3-235ENST00000556082 A0A1W2PNN7 141 aa5.24□□□□□ -1.57
ATXN3-235ENST00000556082 RPL37AP8A6NKH3 93 aa5.24□□□□□ -1.57
ATXN3-235ENST00000556082 GAGE2AQ6NT46 116 aa5.24□□□□□ -1.57
ATXN3-235ENST00000556082 REG3GQ6UW15 175 aa5.24□□□□□ -1.57
ATXN3-235ENST00000556082 VPS13DQ5THJ4 4388 aa5.23□□□□□ -1.57
ATXN3-235ENST00000556082 CSMD3Q7Z407 3707 aa5.23□□□□□ -1.57
ATXN3-235ENST00000556082 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-235ENST00000556082 NDUFV3P56181 108 aaKnown RBP5.23□□□□□ -1.57
ATXN3-235ENST00000556082 IMUPQ9GZP8 106 aa5.23□□□□□ -1.57
ATXN3-235ENST00000556082 LAMTOR3Q9UHA4 124 aa5.23□□□□□ -1.57
ATXN3-235ENST00000556082 IGLV5-48A0A075B6I7 105 aa5.22□□□□□ -1.57
ATXN3-235ENST00000556082 TRBV7-7A0A0K0K1E9 115 aa5.22□□□□□ -1.57
ATXN3-235ENST00000556082 H0Y9J4 135 aa5.22□□□□□ -1.57
ATXN3-235ENST00000556082 M0R2N4 97 aa5.22□□□□□ -1.57
ATXN3-235ENST00000556082 Q6ZQT0 140 aa5.22□□□□□ -1.57
ATXN3-235ENST00000556082 DSCR8Q96T75 97 aa5.22□□□□□ -1.57
ATXN3-235ENST00000556082 Q9BRP9 147 aa5.22□□□□□ -1.57
ATXN3-235ENST00000556082 TENM2Q9NT68 2774 aa5.21□□□□□ -1.57
ATXN3-235ENST00000556082 FBN3Q75N90 2809 aa5.21□□□□□ -1.57
ATXN3-235ENST00000556082 IGKV2-24A0A0C4DH68 120 aa5.21□□□□□ -1.58
ATXN3-235ENST00000556082 TRBV7-4A0A0J9YYF1 115 aa5.21□□□□□ -1.58
ATXN3-235ENST00000556082 C3orf84H3BNL1 204 aa5.21□□□□□ -1.58
ATXN3-235ENST00000556082 LINC01547P58512 204 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-235ENST00000556082 C1orf134Q5TEV5 83 aa5.21□□□□□ -1.58
ATXN3-235ENST00000556082 Q8N377 158 aa5.21□□□□□ -1.58
ATXN3-235ENST00000556082 SMCR5Q8TEV8 140 aa5.21□□□□□ -1.58
ATXN3-235ENST00000556082 LINC00846Q9NV44 126 aa5.2□□□□□ -1.58
ATXN3-235ENST00000556082 STARD9Q9P2P6 4700 aa5.2□□□□□ -1.58
ATXN3-235ENST00000556082 CHTF8P0CG12 524 aa5.19□□□□□ -1.58
ATXN3-235ENST00000556082 SPACA4Q8TDM5 124 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms