RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 C15orf56Q8N910 161 aa6.41□□□□□ -1.38
PSEN1-213ENST00000555386 OR13C6PQ8NH95 151 aa6.41□□□□□ -1.38
PSEN1-213ENST00000555386 TMEM126AQ9H061 195 aa6.41□□□□□ -1.38
PSEN1-213ENST00000555386 KRTAP10-1P60331 282 aa6.41□□□□□ -1.38
PSEN1-213ENST00000555386 RYR1P21817 5038 aa6.4□□□□□ -1.38
PSEN1-213ENST00000555386 HAMPP81172 84 aa6.4□□□□□ -1.39
PSEN1-213ENST00000555386 C22orf24Q9Y442 160 aa6.4□□□□□ -1.39
PSEN1-213ENST00000555386 HSPG2P98160 4391 aa6.39□□□□□ -1.39
PSEN1-213ENST00000555386 A0A087WYN8 130 aa6.39□□□□□ -1.39
PSEN1-213ENST00000555386 GAGE2BQ13066 116 aa6.39□□□□□ -1.39
PSEN1-213ENST00000555386 GAGE2EQ4V326 116 aa6.39□□□□□ -1.39
PSEN1-213ENST00000555386 LINC00167Q96N53 147 aa6.39□□□□□ -1.39
PSEN1-213ENST00000555386 GAGE2DQ9UEU5 116 aa6.39□□□□□ -1.39
PSEN1-213ENST00000555386 SLPIP03973 132 aa6.38□□□□□ -1.39
PSEN1-213ENST00000555386 OBSCN-AS1Q96MR7 158 aa6.38□□□□□ -1.39
PSEN1-213ENST00000555386 F8WDY8 70 aa6.37□□□□□ -1.39
PSEN1-213ENST00000555386 UNQ6190/PRO20217Q6UXQ8 127 aa6.37□□□□□ -1.39
PSEN1-213ENST00000555386 SDIM1Q6ZPB5 146 aa6.37□□□□□ -1.39
PSEN1-213ENST00000555386 ORMDL1Q9P0S3 153 aa6.37□□□□□ -1.39
PSEN1-213ENST00000555386 C9orf116Q5BN46 136 aaPredicted RBP6.36□□□□□ -1.39
PSEN1-213ENST00000555386 IMUPQ9GZP8 106 aa6.36□□□□□ -1.39
PSEN1-213ENST00000555386 TRBV7-7A0A0K0K1E9 115 aa6.35□□□□□ -1.39
PSEN1-213ENST00000555386 C10orf25Q5T742 122 aa6.35□□□□□ -1.39
PSEN1-213ENST00000555386 CAMK2N2Q96S95 79 aa6.35□□□□□ -1.39
PSEN1-213ENST00000555386 FAM30AQ9NZY2 134 aa6.35□□□□□ -1.39
PSEN1-213ENST00000555386 PLA2G2DQ9UNK4 145 aa6.35□□□□□ -1.39
PSEN1-213ENST00000555386 S100A7L2Q5SY68 101 aa6.34□□□□□ -1.39
PSEN1-213ENST00000555386 LINC00643Q86TS7 51 aa6.34□□□□□ -1.39
PSEN1-213ENST00000555386 C2orf48Q96LS8 159 aa6.34□□□□□ -1.39
PSEN1-213ENST00000555386 H3BQ85 93 aa6.34□□□□□ -1.4
PSEN1-213ENST00000555386 IGLV6-57P01721 117 aa6.34□□□□□ -1.4
PSEN1-213ENST00000555386 CNBPP62633 177 aaKnown RBP6.34□□□□□ -1.4
PSEN1-213ENST00000555386 PRR3P79522 188 aaKnown RBP6.34□□□□□ -1.4
PSEN1-213ENST00000555386 SYCNQ0VAF6 134 aa6.34□□□□□ -1.4
PSEN1-213ENST00000555386 Q6ZRU5 148 aa6.34□□□□□ -1.4
PSEN1-213ENST00000555386 C9orf163Q8N9P6 203 aa6.34□□□□□ -1.4
PSEN1-213ENST00000555386 DPH3Q96FX2 82 aa6.34□□□□□ -1.4
PSEN1-213ENST00000555386 HERC2O95714 4834 aa6.33□□□□□ -1.4
PSEN1-213ENST00000555386 JMJD7-PLA2G4BH0Y9G9 81 aa6.33□□□□□ -1.4
PSEN1-213ENST00000555386 TMEM256-PLSCR3K7ERE1 68 aa6.33□□□□□ -1.4
PSEN1-213ENST00000555386 NCR3O14931 201 aa6.33□□□□□ -1.4
PSEN1-213ENST00000555386 C6orf48Q9UBA6 75 aa6.33□□□□□ -1.4
PSEN1-213ENST00000555386 IGKV2-24A0A0C4DH68 120 aa6.32□□□□□ -1.4
PSEN1-213ENST00000555386 CHTF8P0CG12 524 aa6.32□□□□□ -1.4
PSEN1-213ENST00000555386 NDUFV3P56181 108 aaKnown RBP6.32□□□□□ -1.4
PSEN1-213ENST00000555386 GAGE2AQ6NT46 116 aa6.32□□□□□ -1.4
PSEN1-213ENST00000555386 Q8NDZ9 215 aa6.32□□□□□ -1.4
PSEN1-213ENST00000555386 ANAPC13Q9BS18 74 aa6.32□□□□□ -1.4
PSEN1-213ENST00000555386 FAT1Q14517 4588 aa6.32□□□□□ -1.4
PSEN1-213ENST00000555386 C6orf99Q4VX62 202 aa6.31□□□□□ -1.4
PSEN1-213ENST00000555386 LINC00575Q6W349 94 aa6.31□□□□□ -1.4
PSEN1-213ENST00000555386 TRBV7-6A0A0J9YX20 115 aa6.3□□□□□ -1.4
PSEN1-213ENST00000555386 PANO1I0J062 215 aa6.3□□□□□ -1.4
PSEN1-213ENST00000555386 SMR3BP02814 79 aaPredicted RBP6.3□□□□□ -1.4
PSEN1-213ENST00000555386 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.3□□□□□ -1.4
PSEN1-213ENST00000555386 CDK2AP2O75956 126 aa6.29□□□□□ -1.4
PSEN1-213ENST00000555386 RPL18AQ02543 176 aaKnown RBP6.29□□□□□ -1.4
PSEN1-213ENST00000555386 SMCR5Q8TEV8 140 aa6.29□□□□□ -1.4
PSEN1-213ENST00000555386 C14orf132Q9NPU4 83 aa6.29□□□□□ -1.4
PSEN1-213ENST00000555386 hADV29S1A0JD25 119 aa6.28□□□□□ -1.4
PSEN1-213ENST00000555386 NDUFC2-KCTD14E9PQ53 114 aa6.28□□□□□ -1.4
PSEN1-213ENST00000555386 SCXQ7RTU7 201 aa6.28□□□□□ -1.4
PSEN1-213ENST00000555386 TRAV23DV6A0A075B6W5 121 aa6.28□□□□□ -1.4
PSEN1-213ENST00000555386 A0A096LNI7 61 aa6.28□□□□□ -1.4
PSEN1-213ENST00000555386 LOC107984640A0A0U1RRK4 108 aa6.28□□□□□ -1.4
PSEN1-213ENST00000555386 CCKP06307 115 aa6.28□□□□□ -1.4
PSEN1-213ENST00000555386 C9orf129Q5T035 196 aaKnown RBP6.28□□□□□ -1.4
PSEN1-213ENST00000555386 DIRC1Q969H9 104 aa6.28□□□□□ -1.4
PSEN1-213ENST00000555386 M0R378 163 aa6.27□□□□□ -1.41
PSEN1-213ENST00000555386 VPREB1P12018 145 aa6.27□□□□□ -1.41
PSEN1-213ENST00000555386 Q6ZSA8 131 aa6.27□□□□□ -1.41
PSEN1-213ENST00000555386 CIRBP-AS1Q8TBR5 109 aa6.27□□□□□ -1.41
PSEN1-213ENST00000555386 VPS13BQ7Z7G8 4022 aa6.26□□□□□ -1.41
PSEN1-213ENST00000555386 TRBV10-3A0A0K0K1G6 114 aa6.26□□□□□ -1.41
PSEN1-213ENST00000555386 XAGE1AQ9HD64 81 aa6.26□□□□□ -1.41
PSEN1-213ENST00000555386 ZNF73O43830 326 aaPredicted RBP6.25□□□□□ -1.41
PSEN1-213ENST00000555386 Q6JHZ5 121 aa6.25□□□□□ -1.41
PSEN1-213ENST00000555386 SPACA4Q8TDM5 124 aa6.25□□□□□ -1.41
PSEN1-213ENST00000555386 KRTAP17-1Q9BYP8 105 aa6.25□□□□□ -1.41
PSEN1-213ENST00000555386 TLX1NBP0CAT3 122 aa6.24□□□□□ -1.41
PSEN1-213ENST00000555386 PDE6GP18545 87 aa6.24□□□□□ -1.41
PSEN1-213ENST00000555386 COX7BP24311 80 aa6.24□□□□□ -1.41
PSEN1-213ENST00000555386 ELOF1P60002 83 aaKnown RBP6.24□□□□□ -1.41
PSEN1-213ENST00000555386 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.24□□□□□ -1.41
PSEN1-213ENST00000555386 Q6ZRP5 223 aa6.24□□□□□ -1.41
PSEN1-213ENST00000555386 LOC110117498A0A087WWA1 95 aa6.23□□□□□ -1.41
PSEN1-213ENST00000555386 LINC00846Q9NV44 126 aa6.23□□□□□ -1.41
PSEN1-213ENST00000555386 PKIGQ9Y2B9 76 aa6.23□□□□□ -1.41
PSEN1-213ENST00000555386 ABCA13Q86UQ4 5058 aa6.23□□□□□ -1.41
PSEN1-213ENST00000555386 RBM3P98179 157 aaKnown RBP6.22□□□□□ -1.41
PSEN1-213ENST00000555386 ATP5EP2Q5VTU8 51 aa6.22□□□□□ -1.41
PSEN1-213ENST00000555386 FAM236AA0A1B0GUQ0 79 aa6.22□□□□□ -1.41
PSEN1-213ENST00000555386 FAM236BA0A1B0GV22 79 aa6.22□□□□□ -1.41
PSEN1-213ENST00000555386 Q6ZQY7 126 aa6.22□□□□□ -1.41
PSEN1-213ENST00000555386 LINC00474Q9P2X8 69 aa6.22□□□□□ -1.41
PSEN1-213ENST00000555386 FAM168BA1KXE4 195 aa6.21□□□□□ -1.42
PSEN1-213ENST00000555386 Q5VSD8 79 aa6.21□□□□□ -1.42
PSEN1-213ENST00000555386 FAM19A5Q7Z5A7 132 aaPredicted RBP6.21□□□□□ -1.42
PSEN1-213ENST00000555386 Q8N1X5 172 aa6.21□□□□□ -1.42
PSEN1-213ENST00000555386 A0A1W2PNN7 141 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms