RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 LELP1Q5T871 98 aa7.49□□□□□ -1.21
SRP54-205ENST00000554803 LYPD5Q6UWN5 251 aa7.49□□□□□ -1.21
SRP54-205ENST00000554803 CHCHD10Q8WYQ3 142 aaPredicted RBP7.49□□□□□ -1.21
SRP54-205ENST00000554803 LOC110117498A0A087WWA1 95 aa7.48□□□□□ -1.21
SRP54-205ENST00000554803 TRAV10A0A0B4J240 114 aa7.48□□□□□ -1.21
SRP54-205ENST00000554803 F8WDY8 70 aa7.48□□□□□ -1.21
SRP54-205ENST00000554803 ZNF561-AS1K7EIQ3 104 aa7.48□□□□□ -1.21
SRP54-205ENST00000554803 SPART-AS1P0CW21 52 aa7.48□□□□□ -1.21
SRP54-205ENST00000554803 TMEM258P61165 79 aa7.48□□□□□ -1.21
SRP54-205ENST00000554803 SMIM20Q8N5G0 67 aa7.48□□□□□ -1.21
SRP54-205ENST00000554803 UBL5Q9BZL1 73 aa7.48□□□□□ -1.21
SRP54-205ENST00000554803 LINC00846Q9NV44 126 aa7.48□□□□□ -1.21
SRP54-205ENST00000554803 NDUFC2-KCTD14E9PQ53 114 aa7.47□□□□□ -1.21
SRP54-205ENST00000554803 DAD1P61803 113 aa7.47□□□□□ -1.21
SRP54-205ENST00000554803 FAT1Q14517 4588 aa7.47□□□□□ -1.21
SRP54-205ENST00000554803 H3BNG1 76 aa7.46□□□□□ -1.22
SRP54-205ENST00000554803 LINC00575Q6W349 94 aa7.46□□□□□ -1.22
SRP54-205ENST00000554803 Q6ZR54 194 aa7.46□□□□□ -1.22
SRP54-205ENST00000554803 LINC00269Q8N2A0 174 aa7.46□□□□□ -1.22
SRP54-205ENST00000554803 C2orf48Q96LS8 159 aa7.46□□□□□ -1.22
SRP54-205ENST00000554803 J3KT08 172 aa7.45□□□□□ -1.22
SRP54-205ENST00000554803 NCR3O14931 201 aa7.45□□□□□ -1.22
SRP54-205ENST00000554803 ANGP03950 147 aaKnown RBP7.45□□□□□ -1.22
SRP54-205ENST00000554803 PRR34Q9NV39 138 aa7.45□□□□□ -1.22
SRP54-205ENST00000554803 USP17L23D6RBM5 183 aa7.44□□□□□ -1.22
SRP54-205ENST00000554803 IGLV6-57P01721 117 aa7.44□□□□□ -1.22
SRP54-205ENST00000554803 HTN3P15516 51 aa7.44□□□□□ -1.22
SRP54-205ENST00000554803 RBM3P98179 157 aaKnown RBP7.44□□□□□ -1.22
SRP54-205ENST00000554803 SPAG11BQ08648 103 aa7.44□□□□□ -1.22
SRP54-205ENST00000554803 LCE2DQ5TA82 110 aaPredicted RBP7.44□□□□□ -1.22
SRP54-205ENST00000554803 Q6ZTC4 211 aa7.44□□□□□ -1.22
SRP54-205ENST00000554803 C6orf223Q8N319 242 aa7.44□□□□□ -1.22
SRP54-205ENST00000554803 DEFB131BA0A096LNP1 70 aa7.43□□□□□ -1.22
SRP54-205ENST00000554803 EPM2AB3EWF7 344 aa7.42□□□□□ -1.22
SRP54-205ENST00000554803 C6orf99Q4VX62 202 aa7.42□□□□□ -1.22
SRP54-205ENST00000554803 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.42□□□□□ -1.22
SRP54-205ENST00000554803 C1orf134Q5TEV5 83 aa7.41□□□□□ -1.22
SRP54-205ENST00000554803 CXCL6P80162 114 aa7.4□□□□□ -1.22
SRP54-205ENST00000554803 TNP2Q05952 138 aa7.4□□□□□ -1.22
SRP54-205ENST00000554803 Q6ZQT0 140 aa7.4□□□□□ -1.22
SRP54-205ENST00000554803 DIRC1Q969H9 104 aa7.4□□□□□ -1.22
SRP54-205ENST00000554803 DSCR8Q96T75 97 aa7.4□□□□□ -1.22
SRP54-205ENST00000554803 IGKV3D-7A0A0C4DH55 119 aa7.39□□□□□ -1.23
SRP54-205ENST00000554803 SLPIP03973 132 aa7.39□□□□□ -1.23
SRP54-205ENST00000554803 C9orf129Q5T035 196 aaKnown RBP7.39□□□□□ -1.23
SRP54-205ENST00000554803 HMCN2Q8NDA2 5059 aa7.38□□□□□ -1.23
SRP54-205ENST00000554803 A0A1B0GW54 56 aa7.38□□□□□ -1.23
SRP54-205ENST00000554803 CLPSL2Q6UWE3 100 aa7.38□□□□□ -1.23
SRP54-205ENST00000554803 UPK3BQ9BT76 320 aa7.38□□□□□ -1.23
SRP54-205ENST00000554803 TRAV23DV6A0A075B6W5 121 aa7.37□□□□□ -1.23
SRP54-205ENST00000554803 LOC107984640A0A0U1RRK4 108 aa7.37□□□□□ -1.23
SRP54-205ENST00000554803 UBE2DNLQ8IWF7 75 aa7.36□□□□□ -1.23
SRP54-205ENST00000554803 LAMTOR3Q9UHA4 124 aa7.36□□□□□ -1.23
SRP54-205ENST00000554803 TRAV7A0A075B6U4 112 aa7.35□□□□□ -1.23
SRP54-205ENST00000554803 A0A096LPF7 62 aa7.35□□□□□ -1.23
SRP54-205ENST00000554803 M0R378 163 aa7.35□□□□□ -1.23
SRP54-205ENST00000554803 COX7BP24311 80 aa7.35□□□□□ -1.23
SRP54-205ENST00000554803 UNQ6190/PRO20217Q6UXQ8 127 aa7.35□□□□□ -1.23
SRP54-205ENST00000554803 IGLV10-54A0A075B6I4 117 aa7.34□□□□□ -1.23
SRP54-205ENST00000554803 ZNF73O43830 326 aaPredicted RBP7.34□□□□□ -1.23
SRP54-205ENST00000554803 ELOF1P60002 83 aaKnown RBP7.34□□□□□ -1.23
SRP54-205ENST00000554803 PRR3P79522 188 aaKnown RBP7.33□□□□□ -1.24
SRP54-205ENST00000554803 TRBV7-4A0A0J9YYF1 115 aa7.32□□□□□ -1.24
SRP54-205ENST00000554803 NDUFC1O43677 76 aa7.32□□□□□ -1.24
SRP54-205ENST00000554803 ENHOQ6UWT2 76 aa7.32□□□□□ -1.24
SRP54-205ENST00000554803 Q6ZQY7 126 aa7.32□□□□□ -1.24
SRP54-205ENST00000554803 KLK12Q9UKR0 248 aa7.32□□□□□ -1.24
SRP54-205ENST00000554803 ATP5EP56381 51 aaPredicted RBP7.31□□□□□ -1.24
SRP54-205ENST00000554803 C9orf116Q5BN46 136 aaPredicted RBP7.31□□□□□ -1.24
SRP54-205ENST00000554803 A0A087WVE0 104 aa7.3□□□□□ -1.24
SRP54-205ENST00000554803 ERC2-IT1O76042 136 aa7.3□□□□□ -1.24
SRP54-205ENST00000554803 LINC01547P58512 204 aaPredicted RBP7.3□□□□□ -1.24
SRP54-205ENST00000554803 C10orf25Q5T742 122 aa7.3□□□□□ -1.24
SRP54-205ENST00000554803 Q5VSD8 79 aa7.3□□□□□ -1.24
SRP54-205ENST00000554803 Q6ZVQ6 151 aa7.3□□□□□ -1.24
SRP54-205ENST00000554803 CAMK2N2Q96S95 79 aa7.3□□□□□ -1.24
SRP54-205ENST00000554803 C6orf48Q9UBA6 75 aa7.3□□□□□ -1.24
SRP54-205ENST00000554803 VPREB1P12018 145 aa7.29□□□□□ -1.24
SRP54-205ENST00000554803 J3QL48 77 aa7.28□□□□□ -1.24
SRP54-205ENST00000554803 KLKP1Q107X0 134 aa7.28□□□□□ -1.24
SRP54-205ENST00000554803 Q8NDZ9 215 aa7.28□□□□□ -1.24
SRP54-205ENST00000554803 DPH3Q96FX2 82 aa7.28□□□□□ -1.24
SRP54-205ENST00000554803 PLA2G2DQ9UNK4 145 aa7.28□□□□□ -1.24
SRP54-205ENST00000554803 KRTAP10-2P60368 255 aa7.27□□□□□ -1.25
SRP54-205ENST00000554803 ESRGQ1W209 222 aa7.27□□□□□ -1.25
SRP54-205ENST00000554803 LINC01556Q5JQF7 62 aa7.27□□□□□ -1.25
SRP54-205ENST00000554803 NBDYA0A0U1RRE5 68 aa7.26□□□□□ -1.25
SRP54-205ENST00000554803 FAM19A1Q7Z5A9 133 aa7.26□□□□□ -1.25
SRP54-205ENST00000554803 LINC00528Q8N1L1 170 aa7.26□□□□□ -1.25
SRP54-205ENST00000554803 C1orf43Q9BWL3 253 aa7.26□□□□□ -1.25
SRP54-205ENST00000554803 TLX1NBP0CAT3 122 aa7.25□□□□□ -1.25
SRP54-205ENST00000554803 C5orf47Q569G3 176 aa7.25□□□□□ -1.25
SRP54-205ENST00000554803 KRTAP26-1Q6PEX3 210 aa7.25□□□□□ -1.25
SRP54-205ENST00000554803 Q8N3U1 123 aa7.25□□□□□ -1.25
SRP54-205ENST00000554803 DHRS4-AS1Q9P1J3 65 aa7.25□□□□□ -1.25
SRP54-205ENST00000554803 HAMPP81172 84 aa7.24□□□□□ -1.25
SRP54-205ENST00000554803 SERTAD4-AS1Q5TG53 156 aa7.24□□□□□ -1.25
SRP54-205ENST00000554803 LINC00588Q9Y4M8 146 aa7.24□□□□□ -1.25
SRP54-205ENST00000554803 FAM236DA0A1B0GTK5 79 aa7.23□□□□□ -1.25
SRP54-205ENST00000554803 FAM236CP0DP71 79 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms