RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 SMIM11BQ8TCY0 68 aa10.35□□□□□ -0.75
ACTN1-209ENST00000553659 CLEC2BQ92478 149 aa10.35□□□□□ -0.75
ACTN1-209ENST00000553659 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-209ENST00000553659 A0A1B0GX51 115 aa10.34□□□□□ -0.75
ACTN1-209ENST00000553659 SYCNQ0VAF6 134 aa10.34□□□□□ -0.75
ACTN1-209ENST00000553659 DNAH8Q96JB1 4490 aa10.34□□□□□ -0.75
ACTN1-209ENST00000553659 NDUFC2-KCTD14E9PQ53 114 aa10.33□□□□□ -0.76
ACTN1-209ENST00000553659 LINC00526Q96FQ7 95 aa10.33□□□□□ -0.76
ACTN1-209ENST00000553659 SNCGO76070 127 aa10.32□□□□□ -0.76
ACTN1-209ENST00000553659 S100A7L2Q5SY68 101 aa10.32□□□□□ -0.76
ACTN1-209ENST00000553659 Q6ZRU5 148 aa10.32□□□□□ -0.76
ACTN1-209ENST00000553659 SCXQ7RTU7 201 aa10.31□□□□□ -0.76
ACTN1-209ENST00000553659 DNAL4O96015 105 aa10.3□□□□□ -0.76
ACTN1-209ENST00000553659 TLX1NBP0CAT3 122 aa10.3□□□□□ -0.76
ACTN1-209ENST00000553659 SERTAD4-AS1Q5TG53 156 aa10.3□□□□□ -0.76
ACTN1-209ENST00000553659 VPS25Q9BRG1 176 aa10.29□□□□□ -0.76
ACTN1-209ENST00000553659 USP17L23D6RBM5 183 aa10.28□□□□□ -0.76
ACTN1-209ENST00000553659 KRTAP10-4P60372 401 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-209ENST00000553659 NCR3O14931 201 aa10.27□□□□□ -0.77
ACTN1-209ENST00000553659 OXTP01178 125 aa10.26□□□□□ -0.77
ACTN1-209ENST00000553659 IGLV6-57P01721 117 aa10.26□□□□□ -0.77
ACTN1-209ENST00000553659 CIRBP-AS1Q8TBR5 109 aa10.26□□□□□ -0.77
ACTN1-209ENST00000553659 M0R378 163 aa10.25□□□□□ -0.77
ACTN1-209ENST00000553659 C14orf177Q52M58 125 aa10.25□□□□□ -0.77
ACTN1-209ENST00000553659 VPREB1P12018 145 aa10.23□□□□□ -0.77
ACTN1-209ENST00000553659 PRR3P79522 188 aaKnown RBP10.23□□□□□ -0.77
ACTN1-209ENST00000553659 RPL18AQ02543 176 aaKnown RBP10.23□□□□□ -0.77
ACTN1-209ENST00000553659 FAM218AQ96MZ4 157 aa10.23□□□□□ -0.77
ACTN1-209ENST00000553659 XAGE1AQ9HD64 81 aa10.23□□□□□ -0.77
ACTN1-209ENST00000553659 PLA2G2DQ9UNK4 145 aa10.23□□□□□ -0.77
ACTN1-209ENST00000553659 TRBV7-6A0A0J9YX20 115 aa10.22□□□□□ -0.77
ACTN1-209ENST00000553659 H3BQ85 93 aa10.22□□□□□ -0.77
ACTN1-209ENST00000553659 BAALC-AS2P0C853 105 aa10.22□□□□□ -0.77
ACTN1-209ENST00000553659 PKIGQ9Y2B9 76 aa10.22□□□□□ -0.77
ACTN1-209ENST00000553659 TRAV23DV6A0A075B6W5 121 aa10.21□□□□□ -0.77
ACTN1-209ENST00000553659 Q6ZRP5 223 aa10.21□□□□□ -0.77
ACTN1-209ENST00000553659 Q8NDZ9 215 aa10.21□□□□□ -0.77
ACTN1-209ENST00000553659 A0A087WYN8 130 aa10.2□□□□□ -0.78
ACTN1-209ENST00000553659 GAGE2EQ4V326 116 aa10.2□□□□□ -0.78
ACTN1-209ENST00000553659 C6orf99Q4VX62 202 aa10.2□□□□□ -0.78
ACTN1-209ENST00000553659 DIRC1Q969H9 104 aa10.2□□□□□ -0.78
ACTN1-209ENST00000553659 LINC00167Q96N53 147 aa10.2□□□□□ -0.78
ACTN1-209ENST00000553659 GAGE2DQ9UEU5 116 aa10.2□□□□□ -0.78
ACTN1-209ENST00000553659 LOC107984640A0A0U1RRK4 108 aa10.19□□□□□ -0.78
ACTN1-209ENST00000553659 GHRHP01286 108 aa10.19□□□□□ -0.78
ACTN1-209ENST00000553659 ORMDL1Q9P0S3 153 aa10.19□□□□□ -0.78
ACTN1-209ENST00000553659 LRP1Q07954 4544 aaKnown RBP10.19□□□□□ -0.78
ACTN1-209ENST00000553659 TRBV10-3A0A0K0K1G6 114 aa10.18□□□□□ -0.78
ACTN1-209ENST00000553659 IGLV5-37A0A075B6J1 123 aa10.17□□□□□ -0.78
ACTN1-209ENST00000553659 CNBPP62633 177 aaKnown RBP10.17□□□□□ -0.78
ACTN1-209ENST00000553659 NKAPP1Q8N9T2 125 aa10.17□□□□□ -0.78
ACTN1-209ENST00000553659 TEX49A0A1B0GTD5 131 aa10.16□□□□□ -0.78
ACTN1-209ENST00000553659 FAM240AA0A1B0GVK7 77 aa10.16□□□□□ -0.78
ACTN1-209ENST00000553659 LINC00575Q6W349 94 aa10.16□□□□□ -0.78
ACTN1-209ENST00000553659 ZNF73O43830 326 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-209ENST00000553659 RPL37AP61513 92 aaKnown RBP10.15□□□□□ -0.78
ACTN1-209ENST00000553659 C9orf129Q5T035 196 aaKnown RBP10.15□□□□□ -0.78
ACTN1-209ENST00000553659 TMEM256-PLSCR3K7ERE1 68 aa10.14□□□□□ -0.79
ACTN1-209ENST00000553659 SLPIP03973 132 aa10.14□□□□□ -0.79
ACTN1-209ENST00000553659 ACYP1P07311 99 aa10.14□□□□□ -0.79
ACTN1-209ENST00000553659 hADV29S1A0JD25 119 aa10.13□□□□□ -0.79
ACTN1-209ENST00000553659 COX7BP24311 80 aa10.13□□□□□ -0.79
ACTN1-209ENST00000553659 HMCN2Q8NDA2 5059 aa10.12□□□□□ -0.79
ACTN1-209ENST00000553659 FAT3Q8TDW7 4589 aa10.12□□□□□ -0.79
ACTN1-209ENST00000553659 JMJD7-PLA2G4BH0Y9G9 81 aa10.11□□□□□ -0.79
ACTN1-209ENST00000553659 ELOF1P60002 83 aaKnown RBP10.11□□□□□ -0.79
ACTN1-209ENST00000553659 C9orf163Q8N9P6 203 aa10.11□□□□□ -0.79
ACTN1-209ENST00000553659 SIGMAR1Q99720 223 aa10.11□□□□□ -0.79
ACTN1-209ENST00000553659 KCNQ1DNQ9H478 68 aa10.1□□□□□ -0.79
ACTN1-209ENST00000553659 PRYO14603 147 aa10.09□□□□□ -0.79
ACTN1-209ENST00000553659 GAGE2BQ13066 116 aa10.09□□□□□ -0.79
ACTN1-209ENST00000553659 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-209ENST00000553659 OBSCN-AS1Q96MR7 158 aa10.09□□□□□ -0.79
ACTN1-209ENST00000553659 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-209ENST00000553659 SDIM1Q6ZPB5 146 aa10.07□□□□□ -0.8
ACTN1-209ENST00000553659 C7orf33Q8WU49 177 aa10.07□□□□□ -0.8
ACTN1-209ENST00000553659 CDIP1Q9H305 208 aa10.07□□□□□ -0.8
ACTN1-209ENST00000553659 C22orf24Q9Y442 160 aa10.07□□□□□ -0.8
ACTN1-209ENST00000553659 PKHD1L1Q86WI1 4243 aa10.06□□□□□ -0.8
ACTN1-209ENST00000553659 C21orf62-AS1Q17RA5 79 aa10.06□□□□□ -0.8
ACTN1-209ENST00000553659 UBR4Q5T4S7 5183 aa10.06□□□□□ -0.8
ACTN1-209ENST00000553659 PANO1I0J062 215 aa10.05□□□□□ -0.8
ACTN1-209ENST00000553659 MT1HL1P0DM35 61 aa10.04□□□□□ -0.8
ACTN1-209ENST00000553659 SCGB1A1P11684 91 aa10.04□□□□□ -0.8
ACTN1-209ENST00000553659 IGLV1-50A0A075B6I6 118 aa10.03□□□□□ -0.8
ACTN1-209ENST00000553659 MRPL55Q7Z7F7 128 aaKnown RBP10.03□□□□□ -0.8
ACTN1-209ENST00000553659 LINC00474Q9P2X8 69 aa10.03□□□□□ -0.8
ACTN1-209ENST00000553659 DHRS4-AS1Q9P1J3 65 aa10.02□□□□□ -0.81
ACTN1-209ENST00000553659 SPRR1AP35321 89 aa10.01□□□□□ -0.81
ACTN1-209ENST00000553659 Q6ZQY7 126 aa10.01□□□□□ -0.81
ACTN1-209ENST00000553659 ETDCA0A1B0GVM5 59 aa9.99□□□□□ -0.81
ACTN1-209ENST00000553659 PDE6GP18545 87 aa9.99□□□□□ -0.81
ACTN1-209ENST00000553659 FAM19A5Q7Z5A7 132 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-209ENST00000553659 DPH3Q96FX2 82 aa9.99□□□□□ -0.81
ACTN1-209ENST00000553659 A0A096LNI7 61 aa9.98□□□□□ -0.81
ACTN1-209ENST00000553659 FAM168BA1KXE4 195 aa9.97□□□□□ -0.81
ACTN1-209ENST00000553659 GAGE2AQ6NT46 116 aa9.97□□□□□ -0.81
ACTN1-209ENST00000553659 C14orf132Q9NPU4 83 aa9.97□□□□□ -0.81
ACTN1-209ENST00000553659 LAMTOR3Q9UHA4 124 aa9.97□□□□□ -0.81
ACTN1-209ENST00000553659 RBM3P98179 157 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms