RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 IGLV1-50A0A075B6I6 118 aa12.51□□□□□ -0.41
SSH1-209ENST00000551165 hADV29S1A0JD25 119 aa12.51□□□□□ -0.41
SSH1-209ENST00000551165 PANO1I0J062 215 aa12.51□□□□□ -0.41
SSH1-209ENST00000551165 SDIM1Q6ZPB5 146 aa12.51□□□□□ -0.41
SSH1-209ENST00000551165 MRPL55Q7Z7F7 128 aaKnown RBP12.51□□□□□ -0.41
SSH1-209ENST00000551165 C1orf134Q5TEV5 83 aa12.51□□□□□ -0.41
SSH1-209ENST00000551165 A0A1B0GX51 115 aa12.5□□□□□ -0.41
SSH1-209ENST00000551165 ORMDL1Q9P0S3 153 aa12.5□□□□□ -0.41
SSH1-209ENST00000551165 ALMS1Q8TCU4 4167 aa12.5□□□□□ -0.41
SSH1-209ENST00000551165 DNAH6Q9C0G6 4158 aa12.49□□□□□ -0.41
SSH1-209ENST00000551165 DNAH17Q9UFH2 4485 aa12.48□□□□□ -0.41
SSH1-209ENST00000551165 A0A1B0GV72 72 aa12.48□□□□□ -0.41
SSH1-209ENST00000551165 J3QR89 54 aa12.48□□□□□ -0.41
SSH1-209ENST00000551165 VPS25Q9BRG1 176 aa12.48□□□□□ -0.41
SSH1-209ENST00000551165 LINC00528Q8N1L1 170 aa12.48□□□□□ -0.41
SSH1-209ENST00000551165 C3orf84H3BNL1 204 aa12.47□□□□□ -0.41
SSH1-209ENST00000551165 Q6ZQY7 126 aa12.47□□□□□ -0.41
SSH1-209ENST00000551165 TRBV7-6A0A0J9YX20 115 aa12.46□□□□□ -0.41
SSH1-209ENST00000551165 KRTAP4-16G5E9R7 235 aaPredicted RBP12.44□□□□□ -0.42
SSH1-209ENST00000551165 TNP2Q05952 138 aa12.43□□□□□ -0.42
SSH1-209ENST00000551165 KRTAP11-1Q8IUC1 163 aa12.43□□□□□ -0.42
SSH1-209ENST00000551165 FRAS1Q86XX4 4008 aa12.43□□□□□ -0.42
SSH1-209ENST00000551165 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.43□□□□□ -0.42
SSH1-209ENST00000551165 SPRR1AP35321 89 aa12.42□□□□□ -0.42
SSH1-209ENST00000551165 PHF5AQ7RTV0 110 aaKnown RBP12.42□□□□□ -0.42
SSH1-209ENST00000551165 PRYO14603 147 aa12.42□□□□□ -0.42
SSH1-209ENST00000551165 RTL8CO15255 209 aa12.42□□□□□ -0.42
SSH1-209ENST00000551165 SNCGO76070 127 aa12.41□□□□□ -0.42
SSH1-209ENST00000551165 B5MCH6 92 aa12.4□□□□□ -0.42
SSH1-209ENST00000551165 TMEM256-PLSCR3K7ERE1 68 aa12.39□□□□□ -0.43
SSH1-209ENST00000551165 Q9BRP9 147 aa12.39□□□□□ -0.43
SSH1-209ENST00000551165 CDIP1Q9H305 208 aa12.39□□□□□ -0.43
SSH1-209ENST00000551165 C14orf132Q9NPU4 83 aa12.39□□□□□ -0.43
SSH1-209ENST00000551165 OBSCN-AS1Q96MR7 158 aa12.38□□□□□ -0.43
SSH1-209ENST00000551165 Q6ZRX8 168 aa12.37□□□□□ -0.43
SSH1-209ENST00000551165 ETDCA0A1B0GVM5 59 aa12.37□□□□□ -0.43
SSH1-209ENST00000551165 REG3GQ6UW15 175 aa12.37□□□□□ -0.43
SSH1-209ENST00000551165 DPH3Q96FX2 82 aa12.37□□□□□ -0.43
SSH1-209ENST00000551165 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.36□□□□□ -0.43
SSH1-209ENST00000551165 SPACA4Q8TDM5 124 aa12.36□□□□□ -0.43
SSH1-209ENST00000551165 DNAH11Q96DT5 4516 aa12.35□□□□□ -0.43
SSH1-209ENST00000551165 IGLV5-52A0A0A0MRZ9 124 aa12.34□□□□□ -0.43
SSH1-209ENST00000551165 LINC00474Q9P2X8 69 aa12.34□□□□□ -0.43
SSH1-209ENST00000551165 FAT2Q9NYQ8 4349 aa12.33□□□□□ -0.44
SSH1-209ENST00000551165 ERC2-IT1O76042 136 aa12.33□□□□□ -0.44
SSH1-209ENST00000551165 SACSQ9NZJ4 4579 aa12.32□□□□□ -0.44
SSH1-209ENST00000551165 KRTAP10-2P60368 255 aa12.32□□□□□ -0.44
SSH1-209ENST00000551165 INAFM2P0DMQ5 153 aa12.32□□□□□ -0.44
SSH1-209ENST00000551165 UBE2BP63146 152 aa12.32□□□□□ -0.44
SSH1-209ENST00000551165 PKIGQ9Y2B9 76 aa12.32□□□□□ -0.44
SSH1-209ENST00000551165 PRLHP81277 87 aa12.3□□□□□ -0.44
SSH1-209ENST00000551165 ST20-AS1Q8NBB2 130 aa12.3□□□□□ -0.44
SSH1-209ENST00000551165 DEFB105AQ8NG35 78 aa12.3□□□□□ -0.44
SSH1-209ENST00000551165 LAMTOR3Q9UHA4 124 aa12.3□□□□□ -0.44
SSH1-209ENST00000551165 DNAH5Q8TE73 4624 aa12.3□□□□□ -0.44
SSH1-209ENST00000551165 GAGE2AQ6NT46 116 aa12.29□□□□□ -0.44
SSH1-209ENST00000551165 SMCR5Q8TEV8 140 aa12.28□□□□□ -0.44
SSH1-209ENST00000551165 DHRS4-AS1Q9P1J3 65 aa12.28□□□□□ -0.44
SSH1-209ENST00000551165 FAM19A1Q7Z5A9 133 aa12.28□□□□□ -0.44
SSH1-209ENST00000551165 SRRM2Q9UQ35 2752 aaKnown RBP12.28□□□□□ -0.44
SSH1-209ENST00000551165 PKD1P98161 4303 aa12.27□□□□□ -0.44
SSH1-209ENST00000551165 LINC01547P58512 204 aaPredicted RBP12.27□□□□□ -0.44
SSH1-209ENST00000551165 DNAH8Q96JB1 4490 aa12.27□□□□□ -0.45
SSH1-209ENST00000551165 XGP55808 180 aa12.27□□□□□ -0.45
SSH1-209ENST00000551165 JMJD7-PLA2G4BH0Y9G9 81 aa12.26□□□□□ -0.45
SSH1-209ENST00000551165 Q8N377 158 aa12.26□□□□□ -0.45
SSH1-209ENST00000551165 EPM2AB3EWF7 344 aa12.26□□□□□ -0.45
SSH1-209ENST00000551165 FAM240AA0A1B0GVK7 77 aa12.24□□□□□ -0.45
SSH1-209ENST00000551165 C3orf22Q8N5N4 141 aa12.24□□□□□ -0.45
SSH1-209ENST00000551165 MT-ATP8P03928 68 aa12.23□□□□□ -0.45
SSH1-209ENST00000551165 NDUFV3P56181 108 aaKnown RBP12.23□□□□□ -0.45
SSH1-209ENST00000551165 RBM3P98179 157 aaKnown RBP12.23□□□□□ -0.45
SSH1-209ENST00000551165 SIGMAR1Q99720 223 aa12.21□□□□□ -0.45
SSH1-209ENST00000551165 HIGD2AQ9BW72 106 aa12.21□□□□□ -0.45
SSH1-209ENST00000551165 FAM30AQ9NZY2 134 aa12.2□□□□□ -0.46
SSH1-209ENST00000551165 H3BQ85 93 aa12.2□□□□□ -0.46
SSH1-209ENST00000551165 CCKP06307 115 aa12.2□□□□□ -0.46
SSH1-209ENST00000551165 PLAC8Q9NZF1 115 aa12.19□□□□□ -0.46
SSH1-209ENST00000551165 Q6ZQT0 140 aa12.18□□□□□ -0.46
SSH1-209ENST00000551165 IGLV5-48A0A075B6I7 105 aa12.17□□□□□ -0.46
SSH1-209ENST00000551165 ACYP1P07311 99 aa12.17□□□□□ -0.46
SSH1-209ENST00000551165 GHRHP01286 108 aa12.16□□□□□ -0.46
SSH1-209ENST00000551165 LINC00846Q9NV44 126 aa12.16□□□□□ -0.46
SSH1-209ENST00000551165 LCE6AA0A183 80 aa12.16□□□□□ -0.46
SSH1-209ENST00000551165 LOC110117498A0A087WWA1 95 aa12.15□□□□□ -0.46
SSH1-209ENST00000551165 DSCR8Q96T75 97 aa12.15□□□□□ -0.46
SSH1-209ENST00000551165 BCE1O60756 84 aa12.14□□□□□ -0.47
SSH1-209ENST00000551165 TRBV7-4A0A0J9YYF1 115 aa12.14□□□□□ -0.47
SSH1-209ENST00000551165 UBE2AP49459 152 aa12.14□□□□□ -0.47
SSH1-209ENST00000551165 KRTAP10-1P60331 282 aa12.14□□□□□ -0.47
SSH1-209ENST00000551165 HAMPP81172 84 aa12.14□□□□□ -0.47
SSH1-209ENST00000551165 KRTAP13-1Q8IUC0 172 aa12.13□□□□□ -0.47
SSH1-209ENST00000551165 PSORS1C2Q9UIG4 136 aa12.12□□□□□ -0.47
SSH1-209ENST00000551165 SMIM29Q86T20 159 aa12.12□□□□□ -0.47
SSH1-209ENST00000551165 KMT2CQ8NEZ4 4911 aaKnown RBP12.11□□□□□ -0.47
SSH1-209ENST00000551165 H0Y9J4 135 aa12.11□□□□□ -0.47
SSH1-209ENST00000551165 CIRBP-AS1Q8TBR5 109 aa12.1□□□□□ -0.47
SSH1-209ENST00000551165 PKHD1P08F94 4074 aa12.08□□□□□ -0.48
SSH1-209ENST00000551165 RYR2Q92736 4967 aa12.07□□□□□ -0.48
SSH1-209ENST00000551165 SCXQ7RTU7 201 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms