RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 A0A096LNI7 61 aa9.98□□□□□ -0.81
SCN8A-206ENST00000550891 IGLV1-50A0A075B6I6 118 aa9.97□□□□□ -0.81
SCN8A-206ENST00000550891 KRTAP21-3Q3LHN1 58 aa9.97□□□□□ -0.81
SCN8A-206ENST00000550891 DSCR8Q96T75 97 aa9.96□□□□□ -0.81
SCN8A-206ENST00000550891 MEGF8Q7Z7M0 2845 aa9.96□□□□□ -0.82
SCN8A-206ENST00000550891 CCKP06307 115 aa9.95□□□□□ -0.82
SCN8A-206ENST00000550891 LINC00643Q86TS7 51 aa9.95□□□□□ -0.82
SCN8A-206ENST00000550891 DHRS4-AS1Q9P1J3 65 aa9.95□□□□□ -0.82
SCN8A-206ENST00000550891 DPH3Q96FX2 82 aa9.94□□□□□ -0.82
SCN8A-206ENST00000550891 LRCOL1A6NCL2 159 aa9.94□□□□□ -0.82
SCN8A-206ENST00000550891 Q6ZRX8 168 aa9.93□□□□□ -0.82
SCN8A-206ENST00000550891 C9orf163Q8N9P6 203 aa9.93□□□□□ -0.82
SCN8A-206ENST00000550891 UBE2BP63146 152 aa9.92□□□□□ -0.82
SCN8A-206ENST00000550891 REG3GQ6UW15 175 aa9.92□□□□□ -0.82
SCN8A-206ENST00000550891 DEFB105AQ8NG35 78 aa9.92□□□□□ -0.82
SCN8A-206ENST00000550891 KRTAP7-1Q8IUC3 87 aa9.92□□□□□ -0.82
SCN8A-206ENST00000550891 Q6ZRN7 208 aaPredicted RBP9.91□□□□□ -0.82
SCN8A-206ENST00000550891 PDE6GP18545 87 aa9.91□□□□□ -0.82
SCN8A-206ENST00000550891 LINC00474Q9P2X8 69 aa9.91□□□□□ -0.82
SCN8A-206ENST00000550891 NDUFV3P56181 108 aaKnown RBP9.9□□□□□ -0.82
SCN8A-206ENST00000550891 LY6G6CO95867 125 aa9.9□□□□□ -0.82
SCN8A-206ENST00000550891 B5MCH6 92 aa9.9□□□□□ -0.83
SCN8A-206ENST00000550891 CHTF8P0CG12 524 aa9.9□□□□□ -0.83
SCN8A-206ENST00000550891 SMCR5Q8TEV8 140 aa9.89□□□□□ -0.83
SCN8A-206ENST00000550891 A0A1W2PNN7 141 aa9.89□□□□□ -0.83
SCN8A-206ENST00000550891 SPRR1AP35321 89 aa9.89□□□□□ -0.83
SCN8A-206ENST00000550891 LINC00846Q9NV44 126 aa9.89□□□□□ -0.83
SCN8A-206ENST00000550891 DNAH1Q9P2D7 4330 aa9.89□□□□□ -0.83
SCN8A-206ENST00000550891 SDIM1Q6ZPB5 146 aa9.88□□□□□ -0.83
SCN8A-206ENST00000550891 DNHD1Q96M86 4753 aa9.87□□□□□ -0.83
SCN8A-206ENST00000550891 LOC110117498A0A087WWA1 95 aa9.87□□□□□ -0.83
SCN8A-206ENST00000550891 Q6Q795 121 aa9.87□□□□□ -0.83
SCN8A-206ENST00000550891 A0A087WTM6 91 aa9.87□□□□□ -0.83
SCN8A-206ENST00000550891 Q6ZQT0 140 aa9.87□□□□□ -0.83
SCN8A-206ENST00000550891 UBL5Q9BZL1 73 aa9.86□□□□□ -0.83
SCN8A-206ENST00000550891 PRKDCP78527 4128 aaKnown RBP9.86□□□□□ -0.83
SCN8A-206ENST00000550891 KRTAP4-16G5E9R7 235 aaPredicted RBP9.86□□□□□ -0.83
SCN8A-206ENST00000550891 FAM19A1Q7Z5A9 133 aa9.86□□□□□ -0.83
SCN8A-206ENST00000550891 WWC2-AS2Q96NR7 200 aa9.86□□□□□ -0.83
SCN8A-206ENST00000550891 C1orf134Q5TEV5 83 aa9.85□□□□□ -0.83
SCN8A-206ENST00000550891 Q9BRP9 147 aa9.85□□□□□ -0.83
SCN8A-206ENST00000550891 CSMD3Q7Z407 3707 aa9.84□□□□□ -0.83
SCN8A-206ENST00000550891 IMUPQ9GZP8 106 aa9.84□□□□□ -0.83
SCN8A-206ENST00000550891 DYNC2H1Q8NCM8 4307 aaKnown RBP9.84□□□□□ -0.83
SCN8A-206ENST00000550891 LYSTQ99698 3801 aa9.84□□□□□ -0.83
SCN8A-206ENST00000550891 TRBV7-7A0A0K0K1E9 115 aa9.84□□□□□ -0.83
SCN8A-206ENST00000550891 Q6ZR54 194 aa9.83□□□□□ -0.84
SCN8A-206ENST00000550891 PHF5AQ7RTV0 110 aaKnown RBP9.83□□□□□ -0.84
SCN8A-206ENST00000550891 Q8N377 158 aa9.81□□□□□ -0.84
SCN8A-206ENST00000550891 IGKV3D-7A0A0C4DH55 119 aa9.81□□□□□ -0.84
SCN8A-206ENST00000550891 HIGD2AQ9BW72 106 aa9.81□□□□□ -0.84
SCN8A-206ENST00000550891 ANAPC13Q9BS18 74 aa9.8□□□□□ -0.84
SCN8A-206ENST00000550891 TRBV7-4A0A0J9YYF1 115 aa9.8□□□□□ -0.84
SCN8A-206ENST00000550891 PRLHP81277 87 aa9.8□□□□□ -0.84
SCN8A-206ENST00000550891 Q6JHZ5 121 aa9.8□□□□□ -0.84
SCN8A-206ENST00000550891 FBN3Q75N90 2809 aa9.8□□□□□ -0.84
SCN8A-206ENST00000550891 PLECQ15149 4684 aaKnown RBP9.8□□□□□ -0.84
SCN8A-206ENST00000550891 RTL8CO15255 209 aa9.79□□□□□ -0.84
SCN8A-206ENST00000550891 ST20-AS1Q8NBB2 130 aa9.79□□□□□ -0.84
SCN8A-206ENST00000550891 ERC2-IT1O76042 136 aa9.78□□□□□ -0.84
SCN8A-206ENST00000550891 UBE2AP49459 152 aa9.77□□□□□ -0.85
SCN8A-206ENST00000550891 LINC00476Q8WZB0 136 aa9.77□□□□□ -0.85
SCN8A-206ENST00000550891 F8WEM9 126 aa9.77□□□□□ -0.85
SCN8A-206ENST00000550891 ATP5EP2Q5VTU8 51 aa9.76□□□□□ -0.85
SCN8A-206ENST00000550891 C3orf22Q8N5N4 141 aa9.76□□□□□ -0.85
SCN8A-206ENST00000550891 IGLV5-52A0A0A0MRZ9 124 aa9.76□□□□□ -0.85
SCN8A-206ENST00000550891 DNAH10Q8IVF4 4471 aa9.75□□□□□ -0.85
SCN8A-206ENST00000550891 IGLV5-48A0A075B6I7 105 aa9.75□□□□□ -0.85
SCN8A-206ENST00000550891 FAM236AA0A1B0GUQ0 79 aa9.75□□□□□ -0.85
SCN8A-206ENST00000550891 FAM236BA0A1B0GV22 79 aa9.75□□□□□ -0.85
SCN8A-206ENST00000550891 LINC01547P58512 204 aaPredicted RBP9.74□□□□□ -0.85
SCN8A-206ENST00000550891 HIST1H4AP62805 103 aaKnown RBP9.74□□□□□ -0.85
SCN8A-206ENST00000550891 STARD9Q9P2P6 4700 aa9.74□□□□□ -0.85
SCN8A-206ENST00000550891 FUSP35637 526 aaKnown RBP eCLIP9.74□□□□□ -0.85
SCN8A-206ENST00000550891 HAMPP81172 84 aa9.74□□□□□ -0.85
SCN8A-206ENST00000550891 SPACA4Q8TDM5 124 aa9.74□□□□□ -0.85
SCN8A-206ENST00000550891 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.74□□□□□ -0.85
SCN8A-206ENST00000550891 PANO1I0J062 215 aa9.73□□□□□ -0.85
SCN8A-206ENST00000550891 DNAH7Q8WXX0 4024 aa9.73□□□□□ -0.85
SCN8A-206ENST00000550891 TGP01266 2768 aa9.72□□□□□ -0.85
SCN8A-206ENST00000550891 C3orf84H3BNL1 204 aa9.72□□□□□ -0.85
SCN8A-206ENST00000550891 EPM2AB3EWF7 344 aa9.71□□□□□ -0.85
SCN8A-206ENST00000550891 Q6ZVQ6 151 aa9.71□□□□□ -0.85
SCN8A-206ENST00000550891 C1orf137Q5JT78 98 aa9.71□□□□□ -0.86
SCN8A-206ENST00000550891 H0Y9J4 135 aa9.69□□□□□ -0.86
SCN8A-206ENST00000550891 BCE1O60756 84 aa9.69□□□□□ -0.86
SCN8A-206ENST00000550891 KRTAP11-1Q8IUC1 163 aa9.69□□□□□ -0.86
SCN8A-206ENST00000550891 TNP2Q05952 138 aa9.67□□□□□ -0.86
SCN8A-206ENST00000550891 NREPQ16612 68 aa9.67□□□□□ -0.86
SCN8A-206ENST00000550891 VPS13DQ5THJ4 4388 aa9.66□□□□□ -0.86
SCN8A-206ENST00000550891 A0A087WVE0 104 aa9.65□□□□□ -0.86
SCN8A-206ENST00000550891 A0A1B0GW54 56 aa9.63□□□□□ -0.87
SCN8A-206ENST00000550891 CXCL6P80162 114 aa9.63□□□□□ -0.87
SCN8A-206ENST00000550891 Q8NBF4 154 aa9.62□□□□□ -0.87
SCN8A-206ENST00000550891 ATOX1O00244 68 aa9.62□□□□□ -0.87
SCN8A-206ENST00000550891 SMIM29Q86T20 159 aa9.62□□□□□ -0.87
SCN8A-206ENST00000550891 PLAC8Q9NZF1 115 aa9.62□□□□□ -0.87
SCN8A-206ENST00000550891 SCXQ7RTU7 201 aa9.61□□□□□ -0.87
SCN8A-206ENST00000550891 A0A1W2PNM2 257 aa9.6□□□□□ -0.87
SCN8A-206ENST00000550891 BPY2O14599 106 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms