RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 ZNF726P1Q15940 193 aa0.88□□□□□ -2.27
DEPDC4-204ENST00000547823 SMIM15Q7Z3B0 74 aa0.88□□□□□ -2.27
DEPDC4-204ENST00000547823 C9orf62Q8N4C0 152 aa0.88□□□□□ -2.27
DEPDC4-204ENST00000547823 TOMM5Q8N4H5 51 aa0.88□□□□□ -2.27
DEPDC4-204ENST00000547823 STOML3Q8TAV4 291 aa0.88□□□□□ -2.27
DEPDC4-204ENST00000547823 TCEAL7Q9BRU2 100 aa0.88□□□□□ -2.27
DEPDC4-204ENST00000547823 SMIM3Q9BZL3 60 aa0.88□□□□□ -2.27
DEPDC4-204ENST00000547823 SPANXA1Q9NS26 97 aa0.88□□□□□ -2.27
DEPDC4-204ENST00000547823 TRAV9-1A0A075B6T8 112 aa0.87□□□□□ -2.27
DEPDC4-204ENST00000547823 XKRY2A2RUG3 117 aa0.87□□□□□ -2.27
DEPDC4-204ENST00000547823 CCDC160A6NGH7 325 aa0.87□□□□□ -2.27
DEPDC4-204ENST00000547823 MBP02144 154 aa0.87□□□□□ -2.27
DEPDC4-204ENST00000547823 RAB5AP20339 215 aa0.87□□□□□ -2.27
DEPDC4-204ENST00000547823 TMEM136Q6ZRR5 245 aa0.87□□□□□ -2.27
DEPDC4-204ENST00000547823 ZNF625Q96I27 306 aaPredicted RBP0.87□□□□□ -2.27
DEPDC4-204ENST00000547823 Q96NJ1 140 aa0.87□□□□□ -2.27
DEPDC4-204ENST00000547823 SEC22CQ9BRL7 303 aa0.87□□□□□ -2.27
DEPDC4-204ENST00000547823 Q9BRP9 147 aa0.87□□□□□ -2.27
DEPDC4-204ENST00000547823 SPRR2GQ9BYE4 73 aa0.87□□□□□ -2.27
DEPDC4-204ENST00000547823 ACTR3CQ9C0K3 210 aaPredicted RBP0.87□□□□□ -2.27
DEPDC4-204ENST00000547823 EIF5A2Q9GZV4 153 aaKnown RBP0.87□□□□□ -2.27
DEPDC4-204ENST00000547823 KCNQ1DNQ9H478 68 aa0.87□□□□□ -2.27
DEPDC4-204ENST00000547823 SND1-IT1Q9HBX3 110 aa0.87□□□□□ -2.27
DEPDC4-204ENST00000547823 HSPB11Q9Y547 144 aa0.87□□□□□ -2.27
DEPDC4-204ENST00000547823 FAM240BA0A1B0GVZ2 78 aa0.86□□□□□ -2.27
DEPDC4-204ENST00000547823 SMKR1H3BMG3 65 aa0.86□□□□□ -2.27
DEPDC4-204ENST00000547823 RPL23P62829 140 aaKnown RBP0.86□□□□□ -2.27
DEPDC4-204ENST00000547823 SERF2P84101 59 aa0.86□□□□□ -2.27
DEPDC4-204ENST00000547823 PYDC2Q56P42 97 aa0.86□□□□□ -2.27
DEPDC4-204ENST00000547823 ALKAL2Q6UX46 152 aa0.86□□□□□ -2.27
DEPDC4-204ENST00000547823 COX7B2Q8TF08 81 aa0.86□□□□□ -2.27
DEPDC4-204ENST00000547823 TMEM141Q96I45 108 aa0.86□□□□□ -2.27
DEPDC4-204ENST00000547823 PSMG3Q9BT73 122 aaPredicted RBP0.86□□□□□ -2.27
DEPDC4-204ENST00000547823 TMEM191AQ9H0A3 160 aa0.86□□□□□ -2.27
DEPDC4-204ENST00000547823 PRO1933Q9H354 126 aa0.86□□□□□ -2.27
DEPDC4-204ENST00000547823 TNFSF18Q9UNG2 199 aa0.86□□□□□ -2.27
DEPDC4-204ENST00000547823 TRBV20OR9-2A0A075B6H5 130 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 CTXND1A0A1B0GTU2 59 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 A0A1W2PNM2 257 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 NAP1L6A6NFF2 107 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 TCAPO15273 167 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 TCL1BO95988 128 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 RAB4AP20338 218 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 SPRR1BP22528 89 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 PFN2P35080 140 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 IFI27P40305 119 aaPredicted RBP0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 RPL35P42766 123 aaKnown RBP0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 CENPWQ5EE01 88 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 Q6ZRX8 168 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 ADM2Q7Z4H4 148 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 C2orf88Q9BSF0 95 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 VCX3BQ9H321 246 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 VCX3AQ9NNX9 186 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 CDKN2A-AS1Q9UH64 79 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 LAMTOR3Q9UHA4 124 aa0.85□□□□□ -2.27
DEPDC4-204ENST00000547823 TRBV10-3A0A0K0K1G6 114 aa0.84□□□□□ -2.27
DEPDC4-204ENST00000547823 MAP1LC3B2A6NCE7 125 aa0.84□□□□□ -2.27
DEPDC4-204ENST00000547823 NCR3O14931 201 aa0.84□□□□□ -2.27
DEPDC4-204ENST00000547823 PPP1R17O96001 155 aa0.84□□□□□ -2.27
DEPDC4-204ENST00000547823 HERVK_113P63121 156 aa0.84□□□□□ -2.27
DEPDC4-204ENST00000547823 KRTAP13-4Q3LI77 160 aa0.84□□□□□ -2.27
DEPDC4-204ENST00000547823 PDZD11Q5EBL8 140 aa0.84□□□□□ -2.27
DEPDC4-204ENST00000547823 AMN1Q8IY45 258 aa0.84□□□□□ -2.27
DEPDC4-204ENST00000547823 AMELXQ99217 191 aa0.84□□□□□ -2.27
DEPDC4-204ENST00000547823 C20orf78Q9BR46 151 aa0.84□□□□□ -2.27
DEPDC4-204ENST00000547823 MAP1LC3BQ9GZQ8 125 aa0.84□□□□□ -2.27
DEPDC4-204ENST00000547823 ERG28Q9UKR5 140 aa0.84□□□□□ -2.27
DEPDC4-204ENST00000547823 V9GYH0 126 aa0.84□□□□□ -2.27
DEPDC4-204ENST00000547823 A0A087WXM4 84 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 FAM236AA0A1B0GUQ0 79 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 FAM236BA0A1B0GV22 79 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 PFDN1O60925 122 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 MPC2O95563 127 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 AKR1D1P51857 326 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 NDUFA6P56556 154 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 SEC11AP67812 179 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 MT1XP80297 61 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 S100A12P80511 92 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 COX17Q14061 63 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 JOSD1Q15040 202 aaPredicted RBP0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 PPP1R1CQ8WVI7 109 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 SMIM12Q96EX1 92 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 SMIM2Q9BVW6 85 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 Q9H521 79 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 BIN3Q9NQY0 253 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 PRO2289Q9P1D8 64 aa0.83□□□□□ -2.28
DEPDC4-204ENST00000547823 TRBV24-1A0A075B6N3 115 aa0.82□□□□□ -2.28
DEPDC4-204ENST00000547823 SMIM26A0A096LP01 95 aa0.82□□□□□ -2.28
DEPDC4-204ENST00000547823 BORCS7-ASMTA0A0B4J1R7 106 aa0.82□□□□□ -2.28
DEPDC4-204ENST00000547823 LOC389332A0A1B0GUA5 103 aa0.82□□□□□ -2.28
DEPDC4-204ENST00000547823 CENPXA8MT69 81 aa0.82□□□□□ -2.28
DEPDC4-204ENST00000547823 D6R8Y8 96 aa0.82□□□□□ -2.28
DEPDC4-204ENST00000547823 ATP6V1G2O95670 118 aa0.82□□□□□ -2.28
DEPDC4-204ENST00000547823 SPINK8P0C7L1 97 aa0.82□□□□□ -2.28
DEPDC4-204ENST00000547823 PET100P0DJ07 73 aa0.82□□□□□ -2.28
DEPDC4-204ENST00000547823 GNG4P50150 75 aa0.82□□□□□ -2.28
DEPDC4-204ENST00000547823 CCL20P78556 96 aa0.82□□□□□ -2.28
DEPDC4-204ENST00000547823 AKR1C8PQ5T2L2 129 aa0.82□□□□□ -2.28
DEPDC4-204ENST00000547823 TRIQKQ629K1 86 aa0.82□□□□□ -2.28
DEPDC4-204ENST00000547823 BOD1L2Q8IYS8 172 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms