RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 SDIM1Q6ZPB5 146 aa8.61□□□□□ -1.03
PTCH1-215ENST00000547672 FAM19A5Q7Z5A7 132 aaPredicted RBP8.61□□□□□ -1.03
PTCH1-215ENST00000547672 DPH3Q96FX2 82 aa8.61□□□□□ -1.03
PTCH1-215ENST00000547672 TENM2Q9NT68 2774 aa8.61□□□□□ -1.03
PTCH1-215ENST00000547672 IGKV2-24A0A0C4DH68 120 aa8.6□□□□□ -1.03
PTCH1-215ENST00000547672 VPS25Q9BRG1 176 aa8.6□□□□□ -1.03
PTCH1-215ENST00000547672 PRKDCP78527 4128 aaKnown RBP8.6□□□□□ -1.03
PTCH1-215ENST00000547672 ACYP1P07311 99 aa8.59□□□□□ -1.03
PTCH1-215ENST00000547672 LINC00528Q8N1L1 170 aa8.59□□□□□ -1.03
PTCH1-215ENST00000547672 TEX49A0A1B0GTD5 131 aa8.58□□□□□ -1.04
PTCH1-215ENST00000547672 FAM168BA1KXE4 195 aa8.58□□□□□ -1.04
PTCH1-215ENST00000547672 DNAH7Q8WXX0 4024 aa8.57□□□□□ -1.04
PTCH1-215ENST00000547672 RPL37AP8A6NKH3 93 aa8.57□□□□□ -1.04
PTCH1-215ENST00000547672 SPRR1AP35321 89 aa8.57□□□□□ -1.04
PTCH1-215ENST00000547672 REG3GQ6UW15 175 aa8.57□□□□□ -1.04
PTCH1-215ENST00000547672 FAM240AA0A1B0GVK7 77 aa8.56□□□□□ -1.04
PTCH1-215ENST00000547672 IGLV5-52A0A0A0MRZ9 124 aa8.55□□□□□ -1.04
PTCH1-215ENST00000547672 RTL8CO15255 209 aa8.55□□□□□ -1.04
PTCH1-215ENST00000547672 PDE6GP18545 87 aa8.55□□□□□ -1.04
PTCH1-215ENST00000547672 Q6ZQY7 126 aa8.55□□□□□ -1.04
PTCH1-215ENST00000547672 Q6ZRX8 168 aa8.55□□□□□ -1.04
PTCH1-215ENST00000547672 OBSCN-AS1Q96MR7 158 aa8.55□□□□□ -1.04
PTCH1-215ENST00000547672 A0A1W2PNN7 141 aa8.54□□□□□ -1.04
PTCH1-215ENST00000547672 B5MCH6 92 aa8.54□□□□□ -1.04
PTCH1-215ENST00000547672 UBE2BP63146 152 aa8.54□□□□□ -1.04
PTCH1-215ENST00000547672 CSMD3Q7Z407 3707 aa8.54□□□□□ -1.04
PTCH1-215ENST00000547672 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
PTCH1-215ENST00000547672 LAMTOR3Q9UHA4 124 aa8.53□□□□□ -1.04
PTCH1-215ENST00000547672 DNAH1Q9P2D7 4330 aa8.53□□□□□ -1.04
PTCH1-215ENST00000547672 KRTAP4-16G5E9R7 235 aaPredicted RBP8.52□□□□□ -1.05
PTCH1-215ENST00000547672 VPS13DQ5THJ4 4388 aa8.52□□□□□ -1.05
PTCH1-215ENST00000547672 EPM2AB3EWF7 344 aa8.51□□□□□ -1.05
PTCH1-215ENST00000547672 H0Y9J4 135 aa8.51□□□□□ -1.05
PTCH1-215ENST00000547672 RBM3P98179 157 aaKnown RBP8.51□□□□□ -1.05
PTCH1-215ENST00000547672 SPACA4Q8TDM5 124 aa8.51□□□□□ -1.05
PTCH1-215ENST00000547672 PLECQ15149 4684 aaKnown RBP8.51□□□□□ -1.05
PTCH1-215ENST00000547672 DSCR8Q96T75 97 aa8.49□□□□□ -1.05
PTCH1-215ENST00000547672 CHTF8P0CG12 524 aa8.48□□□□□ -1.05
PTCH1-215ENST00000547672 SIGMAR1Q99720 223 aa8.48□□□□□ -1.05
PTCH1-215ENST00000547672 NDUFV3P56181 108 aaKnown RBP8.47□□□□□ -1.05
PTCH1-215ENST00000547672 FAM19A1Q7Z5A9 133 aa8.47□□□□□ -1.05
PTCH1-215ENST00000547672 KMT2CQ8NEZ4 4911 aaKnown RBP8.46□□□□□ -1.06
PTCH1-215ENST00000547672 CCKP06307 115 aa8.46□□□□□ -1.06
PTCH1-215ENST00000547672 TNP2Q05952 138 aa8.46□□□□□ -1.06
PTCH1-215ENST00000547672 PHF5AQ7RTV0 110 aaKnown RBP8.46□□□□□ -1.06
PTCH1-215ENST00000547672 PLAC8Q9NZF1 115 aa8.46□□□□□ -1.06
PTCH1-215ENST00000547672 STARD9Q9P2P6 4700 aa8.45□□□□□ -1.06
PTCH1-215ENST00000547672 LOC110117498A0A087WWA1 95 aa8.45□□□□□ -1.06
PTCH1-215ENST00000547672 GAGE2AQ6NT46 116 aa8.45□□□□□ -1.06
PTCH1-215ENST00000547672 C14orf132Q9NPU4 83 aa8.45□□□□□ -1.06
PTCH1-215ENST00000547672 RYR3Q15413 4870 aa8.44□□□□□ -1.06
PTCH1-215ENST00000547672 BCE1O60756 84 aa8.44□□□□□ -1.06
PTCH1-215ENST00000547672 LINC00336Q6ZUF6 198 aa8.44□□□□□ -1.06
PTCH1-215ENST00000547672 IGLV5-48A0A075B6I7 105 aa8.43□□□□□ -1.06
PTCH1-215ENST00000547672 LCE6AA0A183 80 aa8.43□□□□□ -1.06
PTCH1-215ENST00000547672 UBE2AP49459 152 aa8.43□□□□□ -1.06
PTCH1-215ENST00000547672 Q9BRP9 147 aa8.43□□□□□ -1.06
PTCH1-215ENST00000547672 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.43□□□□□ -1.06
PTCH1-215ENST00000547672 DEFB105AQ8NG35 78 aa8.41□□□□□ -1.06
PTCH1-215ENST00000547672 CDIP1Q9H305 208 aa8.41□□□□□ -1.06
PTCH1-215ENST00000547672 A0A1B0GW54 56 aa8.4□□□□□ -1.06
PTCH1-215ENST00000547672 Q8N377 158 aa8.4□□□□□ -1.06
PTCH1-215ENST00000547672 SMCR5Q8TEV8 140 aa8.4□□□□□ -1.06
PTCH1-215ENST00000547672 F8WEM9 126 aa8.39□□□□□ -1.07
PTCH1-215ENST00000547672 LINC00643Q86TS7 51 aa8.39□□□□□ -1.07
PTCH1-215ENST00000547672 PANO1I0J062 215 aa8.38□□□□□ -1.07
PTCH1-215ENST00000547672 Q6ZQT0 140 aa8.38□□□□□ -1.07
PTCH1-215ENST00000547672 HIGD2AQ9BW72 106 aa8.38□□□□□ -1.07
PTCH1-215ENST00000547672 LYSTQ99698 3801 aa8.38□□□□□ -1.07
PTCH1-215ENST00000547672 TRBV7-4A0A0J9YYF1 115 aa8.37□□□□□ -1.07
PTCH1-215ENST00000547672 ZNF706Q9Y5V0 76 aaPredicted RBP8.37□□□□□ -1.07
PTCH1-215ENST00000547672 SCGB1A1P11684 91 aa8.36□□□□□ -1.07
PTCH1-215ENST00000547672 PRLHP81277 87 aa8.36□□□□□ -1.07
PTCH1-215ENST00000547672 UBL5Q9BZL1 73 aa8.36□□□□□ -1.07
PTCH1-215ENST00000547672 DNAH6Q9C0G6 4158 aa8.36□□□□□ -1.07
PTCH1-215ENST00000547672 ALMS1Q8TCU4 4167 aa8.35□□□□□ -1.07
PTCH1-215ENST00000547672 LINC01547P58512 204 aaPredicted RBP8.35□□□□□ -1.07
PTCH1-215ENST00000547672 ERC2-IT1O76042 136 aa8.34□□□□□ -1.07
PTCH1-215ENST00000547672 IMUPQ9GZP8 106 aa8.34□□□□□ -1.07
PTCH1-215ENST00000547672 A0A1B0GV72 72 aa8.33□□□□□ -1.08
PTCH1-215ENST00000547672 SPRR1BP22528 89 aa8.33□□□□□ -1.08
PTCH1-215ENST00000547672 FUSP35637 526 aaKnown RBP eCLIP8.33□□□□□ -1.08
PTCH1-215ENST00000547672 KRTAP10-2P60368 255 aa8.33□□□□□ -1.08
PTCH1-215ENST00000547672 ST20-AS1Q8NBB2 130 aa8.33□□□□□ -1.08
PTCH1-215ENST00000547672 DNAH10Q8IVF4 4471 aa8.33□□□□□ -1.08
PTCH1-215ENST00000547672 XGP55808 180 aa8.32□□□□□ -1.08
PTCH1-215ENST00000547672 ATP5EP2Q5VTU8 51 aa8.32□□□□□ -1.08
PTCH1-215ENST00000547672 Q6Q795 121 aa8.31□□□□□ -1.08
PTCH1-215ENST00000547672 Q6ZSA8 131 aa8.31□□□□□ -1.08
PTCH1-215ENST00000547672 KRTAP13-1Q8IUC0 172 aa8.31□□□□□ -1.08
PTCH1-215ENST00000547672 KRTAP11-1Q8IUC1 163 aa8.31□□□□□ -1.08
PTCH1-215ENST00000547672 PSORS1C2Q9UIG4 136 aa8.31□□□□□ -1.08
PTCH1-215ENST00000547672 ZNF861PO60384 105 aa8.3□□□□□ -1.08
PTCH1-215ENST00000547672 C1orf137Q5JT78 98 aa8.3□□□□□ -1.08
PTCH1-215ENST00000547672 Q6JHZ5 121 aa8.3□□□□□ -1.08
PTCH1-215ENST00000547672 LINC00846Q9NV44 126 aa8.3□□□□□ -1.08
PTCH1-215ENST00000547672 IGLV8-61A0A075B6I0 122 aa8.29□□□□□ -1.08
PTCH1-215ENST00000547672 MT-ATP8P03928 68 aa8.28□□□□□ -1.08
PTCH1-215ENST00000547672 CIRBP-AS1Q8TBR5 109 aa8.28□□□□□ -1.08
PTCH1-215ENST00000547672 RPL37AP61513 92 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms