RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 HRCT1Q6UXD1 115 aa12.49□□□□□ -0.41
MSLN-202ENST00000545450 C6orf48Q9UBA6 75 aa12.49□□□□□ -0.41
MSLN-202ENST00000545450 DEFB131BA0A096LNP1 70 aa12.48□□□□□ -0.41
MSLN-202ENST00000545450 ZNF73O43830 326 aaPredicted RBP12.48□□□□□ -0.41
MSLN-202ENST00000545450 COL7A1Q02388 2944 aa12.47□□□□□ -0.41
MSLN-202ENST00000545450 KLK12Q9UKR0 248 aa12.47□□□□□ -0.41
MSLN-202ENST00000545450 COX7BP24311 80 aa12.47□□□□□ -0.41
MSLN-202ENST00000545450 ELOF1P60002 83 aaKnown RBP12.47□□□□□ -0.41
MSLN-202ENST00000545450 XAGE1AQ9HD64 81 aa12.47□□□□□ -0.41
MSLN-202ENST00000545450 DNAH9Q9NYC9 4486 aa12.46□□□□□ -0.41
MSLN-202ENST00000545450 TRBV7-6A0A0J9YX20 115 aa12.46□□□□□ -0.42
MSLN-202ENST00000545450 SNURFQ9Y675 71 aa12.45□□□□□ -0.42
MSLN-202ENST00000545450 RMI2Q96E14 147 aa12.44□□□□□ -0.42
MSLN-202ENST00000545450 VPREB1P12018 145 aa12.41□□□□□ -0.42
MSLN-202ENST00000545450 SCXQ7RTU7 201 aa12.41□□□□□ -0.42
MSLN-202ENST00000545450 WFDC10BQ8IUB3 73 aa12.4□□□□□ -0.42
MSLN-202ENST00000545450 F8WEM9 126 aa12.4□□□□□ -0.42
MSLN-202ENST00000545450 ESRGQ1W209 222 aa12.4□□□□□ -0.42
MSLN-202ENST00000545450 NDUFC1O43677 76 aa12.39□□□□□ -0.43
MSLN-202ENST00000545450 DNHD1Q96M86 4753 aa12.39□□□□□ -0.43
MSLN-202ENST00000545450 STAB2Q8WWQ8 2551 aa12.39□□□□□ -0.43
MSLN-202ENST00000545450 M0R378 163 aa12.37□□□□□ -0.43
MSLN-202ENST00000545450 LINC00528Q8N1L1 170 aa12.36□□□□□ -0.43
MSLN-202ENST00000545450 NREPQ16612 68 aa12.35□□□□□ -0.43
MSLN-202ENST00000545450 CAMK2N2Q96S95 79 aa12.34□□□□□ -0.43
MSLN-202ENST00000545450 BPY2O14599 106 aa12.33□□□□□ -0.44
MSLN-202ENST00000545450 B9D2Q9BPU9 175 aa12.33□□□□□ -0.44
MSLN-202ENST00000545450 ERC2-IT1O76042 136 aa12.33□□□□□ -0.44
MSLN-202ENST00000545450 HIGD2BQ4VC39 106 aa12.33□□□□□ -0.44
MSLN-202ENST00000545450 SMIM26A0A096LP01 95 aa12.32□□□□□ -0.44
MSLN-202ENST00000545450 KRTAP26-1Q6PEX3 210 aa12.32□□□□□ -0.44
MSLN-202ENST00000545450 ATP5EP56381 51 aaPredicted RBP12.31□□□□□ -0.44
MSLN-202ENST00000545450 PRKDCP78527 4128 aaKnown RBP12.3□□□□□ -0.44
MSLN-202ENST00000545450 Q6ZRU5 148 aa12.3□□□□□ -0.44
MSLN-202ENST00000545450 FP248Q71RG6 208 aaPredicted RBP12.3□□□□□ -0.44
MSLN-202ENST00000545450 TMEM254Q8TBM7 123 aa12.3□□□□□ -0.44
MSLN-202ENST00000545450 IGKV4-1P06312 121 aa12.29□□□□□ -0.44
MSLN-202ENST00000545450 Q8N9L7 120 aa12.28□□□□□ -0.44
MSLN-202ENST00000545450 LINC01556Q5JQF7 62 aa12.26□□□□□ -0.45
MSLN-202ENST00000545450 C15orf56Q8N910 161 aa12.26□□□□□ -0.45
MSLN-202ENST00000545450 OCR1Q9BZK8 76 aa12.26□□□□□ -0.45
MSLN-202ENST00000545450 LINC00588Q9Y4M8 146 aa12.26□□□□□ -0.45
MSLN-202ENST00000545450 LYSTQ99698 3801 aa12.25□□□□□ -0.45
MSLN-202ENST00000545450 LINC00336Q6ZUF6 198 aa12.24□□□□□ -0.45
MSLN-202ENST00000545450 CSMD3Q7Z407 3707 aa12.24□□□□□ -0.45
MSLN-202ENST00000545450 MEGF8Q7Z7M0 2845 aa12.23□□□□□ -0.45
MSLN-202ENST00000545450 Q6ZRP5 223 aa12.23□□□□□ -0.45
MSLN-202ENST00000545450 DYNC2H1Q8NCM8 4307 aaKnown RBP12.23□□□□□ -0.45
MSLN-202ENST00000545450 DNAH10OSP0CZ25 163 aa12.22□□□□□ -0.45
MSLN-202ENST00000545450 A0A0U1RQV1 116 aa12.21□□□□□ -0.45
MSLN-202ENST00000545450 PRO0628Q9UI54 55 aa12.21□□□□□ -0.45
MSLN-202ENST00000545450 KCNQ1DNQ9H478 68 aa12.2□□□□□ -0.46
MSLN-202ENST00000545450 LINC00474Q9P2X8 69 aa12.2□□□□□ -0.46
MSLN-202ENST00000545450 IGLV5-48A0A075B6I7 105 aa12.19□□□□□ -0.46
MSLN-202ENST00000545450 Q8N377 158 aa12.19□□□□□ -0.46
MSLN-202ENST00000545450 DNAH1Q9P2D7 4330 aa12.19□□□□□ -0.46
MSLN-202ENST00000545450 C3orf84H3BNL1 204 aa12.19□□□□□ -0.46
MSLN-202ENST00000545450 PRYO14603 147 aa12.19□□□□□ -0.46
MSLN-202ENST00000545450 F8WDY8 70 aa12.18□□□□□ -0.46
MSLN-202ENST00000545450 DNAH7Q8WXX0 4024 aa12.16□□□□□ -0.46
MSLN-202ENST00000545450 DEFB105AQ8NG35 78 aa12.15□□□□□ -0.46
MSLN-202ENST00000545450 C1orf43Q9BWL3 253 aa12.15□□□□□ -0.46
MSLN-202ENST00000545450 A0A1B0GW54 56 aa12.15□□□□□ -0.47
MSLN-202ENST00000545450 IGKV2D-24A0A075B6R9 120 aa12.14□□□□□ -0.47
MSLN-202ENST00000545450 SYCNQ0VAF6 134 aa12.13□□□□□ -0.47
MSLN-202ENST00000545450 NKAPP1Q8N9T2 125 aa12.13□□□□□ -0.47
MSLN-202ENST00000545450 C7orf33Q8WU49 177 aa12.13□□□□□ -0.47
MSLN-202ENST00000545450 SERTAD4-AS1Q5TG53 156 aa12.13□□□□□ -0.47
MSLN-202ENST00000545450 APLNQ9ULZ1 77 aa12.12□□□□□ -0.47
MSLN-202ENST00000545450 PLECQ15149 4684 aaKnown RBP12.12□□□□□ -0.47
MSLN-202ENST00000545450 TENM2Q9NT68 2774 aa12.11□□□□□ -0.47
MSLN-202ENST00000545450 FUSP35637 526 aaKnown RBP eCLIP12.11□□□□□ -0.47
MSLN-202ENST00000545450 KRTAP21-3Q3LHN1 58 aa12.11□□□□□ -0.47
MSLN-202ENST00000545450 FAM229BQ4G0N7 80 aa12.11□□□□□ -0.47
MSLN-202ENST00000545450 HIGD2AQ9BW72 106 aa12.11□□□□□ -0.47
MSLN-202ENST00000545450 DHRS4-AS1Q9P1J3 65 aa12.1□□□□□ -0.47
MSLN-202ENST00000545450 A0A1W2PNM2 257 aa12.09□□□□□ -0.47
MSLN-202ENST00000545450 TNP2Q05952 138 aa12.08□□□□□ -0.48
MSLN-202ENST00000545450 Q6ZRX8 168 aa12.08□□□□□ -0.48
MSLN-202ENST00000545450 STARD9Q9P2P6 4700 aa12.08□□□□□ -0.48
MSLN-202ENST00000545450 KRTAP4-16G5E9R7 235 aaPredicted RBP12.08□□□□□ -0.48
MSLN-202ENST00000545450 LCE6AA0A183 80 aa12.07□□□□□ -0.48
MSLN-202ENST00000545450 SMIM29Q86T20 159 aa12.07□□□□□ -0.48
MSLN-202ENST00000545450 Q9BRP9 147 aa12.06□□□□□ -0.48
MSLN-202ENST00000545450 PLA2G2DQ9UNK4 145 aa12.06□□□□□ -0.48
MSLN-202ENST00000545450 TLX1NBP0CAT3 122 aa12.05□□□□□ -0.48
MSLN-202ENST00000545450 C1orf137Q5JT78 98 aa12.04□□□□□ -0.48
MSLN-202ENST00000545450 CASC10Q5T4H9 136 aa12.04□□□□□ -0.48
MSLN-202ENST00000545450 FAM30AQ9NZY2 134 aa12.04□□□□□ -0.48
MSLN-202ENST00000545450 SPRR1AP35321 89 aa12.03□□□□□ -0.48
MSLN-202ENST00000545450 Q8NBF4 154 aa12.03□□□□□ -0.48
MSLN-202ENST00000545450 KRTAP1-5Q9BYS1 174 aa12.03□□□□□ -0.48
MSLN-202ENST00000545450 NUPR2A6NF83 97 aa12.03□□□□□ -0.48
MSLN-202ENST00000545450 UBE2DNLQ8IWF7 75 aa12.03□□□□□ -0.48
MSLN-202ENST00000545450 DNAH10Q8IVF4 4471 aa12.03□□□□□ -0.48
MSLN-202ENST00000545450 IGLV1-50A0A075B6I6 118 aa12.02□□□□□ -0.48
MSLN-202ENST00000545450 SPRR4Q96PI1 79 aa12.02□□□□□ -0.48
MSLN-202ENST00000545450 IGLV5-37A0A075B6J1 123 aa12.02□□□□□ -0.49
MSLN-202ENST00000545450 RPL37AP8A6NKH3 93 aa12.02□□□□□ -0.49
MSLN-202ENST00000545450 MPLKIPQ8TAP9 179 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms