RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 ZFP30Q9Y2G7 519 aa2.8□□□□□ -1.96
NPIPB4-219ENST00000543660 IGKV3OR2-268A0A0C4DH90 116 aa2.79□□□□□ -1.96
NPIPB4-219ENST00000543660 TRBV27A0A0K0K1C4 114 aa2.79□□□□□ -1.96
NPIPB4-219ENST00000543660 C17orf112F2Z3M2 114 aa2.79□□□□□ -1.96
NPIPB4-219ENST00000543660 M0R143 59 aa2.79□□□□□ -1.96
NPIPB4-219ENST00000543660 GNG4P50150 75 aa2.79□□□□□ -1.96
NPIPB4-219ENST00000543660 PYDC2Q56P42 97 aa2.79□□□□□ -1.96
NPIPB4-219ENST00000543660 BRK1Q8WUW1 75 aa2.79□□□□□ -1.96
NPIPB4-219ENST00000543660 SMDT1Q9H4I9 107 aa2.79□□□□□ -1.96
NPIPB4-219ENST00000543660 TNFSF18Q9UNG2 199 aa2.79□□□□□ -1.96
NPIPB4-219ENST00000543660 ARL2-SNX15V9GYD0 113 aa2.79□□□□□ -1.96
NPIPB4-219ENST00000543660 V9GYH0 126 aa2.79□□□□□ -1.96
NPIPB4-219ENST00000543660 FCGBPQ9Y6R7 5405 aaPredicted RBP2.79□□□□□ -1.96
NPIPB4-219ENST00000543660 TMSB15BA0A087X1C1 80 aa2.78□□□□□ -1.96
NPIPB4-219ENST00000543660 TMEM218A2RU14 115 aa2.78□□□□□ -1.96
NPIPB4-219ENST00000543660 TMEM256-PLSCR3K7ERE1 68 aa2.78□□□□□ -1.96
NPIPB4-219ENST00000543660 MT1HP80294 61 aa2.78□□□□□ -1.96
NPIPB4-219ENST00000543660 KRTAP19-2Q3LHN2 52 aa2.78□□□□□ -1.96
NPIPB4-219ENST00000543660 ASB16-AS1Q495Z4 193 aa2.78□□□□□ -1.96
NPIPB4-219ENST00000543660 GTF2H5Q6ZYL4 71 aa2.78□□□□□ -1.96
NPIPB4-219ENST00000543660 OR10AG1Q8NH19 301 aa2.78□□□□□ -1.96
NPIPB4-219ENST00000543660 COPS9Q8WXC6 57 aa2.78□□□□□ -1.96
NPIPB4-219ENST00000543660 MIEN1Q9BRT3 115 aa2.78□□□□□ -1.96
NPIPB4-219ENST00000543660 CST9LQ9H4G1 147 aa2.78□□□□□ -1.96
NPIPB4-219ENST00000543660 NHP2Q9NX24 153 aaKnown RBP2.78□□□□□ -1.96
NPIPB4-219ENST00000543660 TP73-AS1Q9UF72 201 aa2.78□□□□□ -1.96
NPIPB4-219ENST00000543660 NEBP20929 6669 aa2.77□□□□□ -1.97
NPIPB4-219ENST00000543660 NAP1L6A6NFF2 107 aa2.77□□□□□ -1.97
NPIPB4-219ENST00000543660 M0QY20 66 aa2.77□□□□□ -1.97
NPIPB4-219ENST00000543660 ARL14EPLP0DKL9 152 aa2.77□□□□□ -1.97
NPIPB4-219ENST00000543660 Q5XG85 94 aa2.77□□□□□ -1.97
NPIPB4-219ENST00000543660 TEX261Q6UWH6 196 aa2.77□□□□□ -1.97
NPIPB4-219ENST00000543660 ATOH7Q8N100 152 aa2.77□□□□□ -1.97
NPIPB4-219ENST00000543660 SPANXA2-OT1Q8N9U9 137 aa2.77□□□□□ -1.97
NPIPB4-219ENST00000543660 SMCR5Q8TEV8 140 aa2.77□□□□□ -1.97
NPIPB4-219ENST00000543660 PRELID3AQ96N28 172 aa2.77□□□□□ -1.97
NPIPB4-219ENST00000543660 IGLV4-69A0A075B6H9 119 aa2.76□□□□□ -1.97
NPIPB4-219ENST00000543660 MUC21A0A140T8X8 626 aa2.76□□□□□ -1.97
NPIPB4-219ENST00000543660 A8MWP4 228 aa2.76□□□□□ -1.97
NPIPB4-219ENST00000543660 UQCRQO14949 82 aa2.76□□□□□ -1.97
NPIPB4-219ENST00000543660 CXCL1P09341 107 aa2.76□□□□□ -1.97
NPIPB4-219ENST00000543660 XCL1P47992 114 aa2.76□□□□□ -1.97
NPIPB4-219ENST00000543660 MRPS36P82909 103 aaKnown RBP2.76□□□□□ -1.97
NPIPB4-219ENST00000543660 DEFB116Q30KQ4 102 aa2.76□□□□□ -1.97
NPIPB4-219ENST00000543660 Q86TA4 180 aa2.76□□□□□ -1.97
NPIPB4-219ENST00000543660 KRTAP7-1Q8IUC3 87 aa2.76□□□□□ -1.97
NPIPB4-219ENST00000543660 A0A096LNJ9 63 aa2.75□□□□□ -1.97
NPIPB4-219ENST00000543660 A0A0B4J2C4 111 aa2.75□□□□□ -1.97
NPIPB4-219ENST00000543660 LINC00959A0A1B0GUT2 108 aa2.75□□□□□ -1.97
NPIPB4-219ENST00000543660 CCL25O15444 150 aa2.75□□□□□ -1.97
NPIPB4-219ENST00000543660 ZNF861PO60384 105 aa2.75□□□□□ -1.97
NPIPB4-219ENST00000543660 GCHFRP30047 84 aa2.75□□□□□ -1.97
NPIPB4-219ENST00000543660 FOXA3P55318 350 aaPredicted RBP2.75□□□□□ -1.97
NPIPB4-219ENST00000543660 MEIG1Q5JSS6 88 aa2.75□□□□□ -1.97
NPIPB4-219ENST00000543660 TSKUQ8WUA8 353 aa2.75□□□□□ -1.97
NPIPB4-219ENST00000543660 H3BPC8 53 aa2.74□□□□□ -1.97
NPIPB4-219ENST00000543660 KRTAP13-2Q52LG2 175 aa2.74□□□□□ -1.97
NPIPB4-219ENST00000543660 SPANXN1Q5VSR9 72 aa2.74□□□□□ -1.97
NPIPB4-219ENST00000543660 LINC01545Q5VT33 79 aa2.74□□□□□ -1.97
NPIPB4-219ENST00000543660 KCNRGQ8N5I3 272 aa2.74□□□□□ -1.97
NPIPB4-219ENST00000543660 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.73□□□□□ -1.97
NPIPB4-219ENST00000543660 IGKV2-29A2NJV5 120 aaPredicted RBP2.73□□□□□ -1.97
NPIPB4-219ENST00000543660 ZNF727A8MUV8 499 aa2.73□□□□□ -1.97
NPIPB4-219ENST00000543660 KRTAP13-3Q3SY46 172 aa2.73□□□□□ -1.97
NPIPB4-219ENST00000543660 LINC00304Q8N9R0 145 aa2.73□□□□□ -1.97
NPIPB4-219ENST00000543660 TTTY13Q9BZ97 58 aa2.73□□□□□ -1.97
NPIPB4-219ENST00000543660 TMEM167BQ9NRX6 74 aa2.73□□□□□ -1.97
NPIPB4-219ENST00000543660 ANAPC11Q9NYG5 84 aa2.73□□□□□ -1.97
NPIPB4-219ENST00000543660 C19orf71A6NCJ1 209 aa2.72□□□□□ -1.97
NPIPB4-219ENST00000543660 LYRM1O43325 122 aa2.72□□□□□ -1.97
NPIPB4-219ENST00000543660 SIX6O95475 246 aa2.72□□□□□ -1.97
NPIPB4-219ENST00000543660 MGPP08493 103 aa2.72□□□□□ -1.97
NPIPB4-219ENST00000543660 FXYD2P54710 66 aa2.72□□□□□ -1.97
NPIPB4-219ENST00000543660 TEN1Q86WV5 123 aa2.72□□□□□ -1.97
NPIPB4-219ENST00000543660 RAB37Q96AX2 223 aa2.72□□□□□ -1.97
NPIPB4-219ENST00000543660 FLGP20930 4061 aaPredicted RBP2.72□□□□□ -1.97
NPIPB4-219ENST00000543660 HBDP02042 147 aa2.71□□□□□ -1.98
NPIPB4-219ENST00000543660 SS18Q15532 418 aa2.71□□□□□ -1.98
NPIPB4-219ENST00000543660 Q5W150 140 aa2.71□□□□□ -1.98
NPIPB4-219ENST00000543660 IMMP2LQ96T52 175 aa2.71□□□□□ -1.98
NPIPB4-219ENST00000543660 G3V3Q6 166 aa2.7□□□□□ -1.98
NPIPB4-219ENST00000543660 H3BQ85 93 aa2.7□□□□□ -1.98
NPIPB4-219ENST00000543660 H3BT86 120 aa2.7□□□□□ -1.98
NPIPB4-219ENST00000543660 TRGC1P0CF51 173 aa2.7□□□□□ -1.98
NPIPB4-219ENST00000543660 IL7P13232 177 aa2.7□□□□□ -1.98
NPIPB4-219ENST00000543660 UBE2G1P62253 170 aa2.7□□□□□ -1.98
NPIPB4-219ENST00000543660 COL5A1-AS1Q5SY13 56 aa2.7□□□□□ -1.98
NPIPB4-219ENST00000543660 LYZL1Q6UWQ5 148 aa2.7□□□□□ -1.98
NPIPB4-219ENST00000543660 C7orf65Q6ZTY9 151 aa2.7□□□□□ -1.98
NPIPB4-219ENST00000543660 FP248Q71RG6 208 aaPredicted RBP2.7□□□□□ -1.98
NPIPB4-219ENST00000543660 ADM2Q7Z4H4 148 aa2.7□□□□□ -1.98
NPIPB4-219ENST00000543660 CDC42SE2Q9NRR3 84 aa2.7□□□□□ -1.98
NPIPB4-219ENST00000543660 MRPL35Q9NZE8 188 aaKnown RBP2.7□□□□□ -1.98
NPIPB4-219ENST00000543660 FAM236AA0A1B0GUQ0 79 aa2.69□□□□□ -1.98
NPIPB4-219ENST00000543660 FAM236BA0A1B0GV22 79 aa2.69□□□□□ -1.98
NPIPB4-219ENST00000543660 A8MUU9 505 aa2.69□□□□□ -1.98
NPIPB4-219ENST00000543660 NUPR1O60356 82 aa2.69□□□□□ -1.98
NPIPB4-219ENST00000543660 RPL28P46779 137 aaKnown RBP2.69□□□□□ -1.98
NPIPB4-219ENST00000543660 TMEM258P61165 79 aa2.69□□□□□ -1.98
NPIPB4-219ENST00000543660 SPAG11BQ08648 103 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms