RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 LY6G6CO95867 125 aa14.36□□□□□ -0.11
HOMER3-204ENST00000539827 C16orf90A8MZG2 172 aa14.36□□□□□ -0.11
HOMER3-204ENST00000539827 ELOF1P60002 83 aaKnown RBP14.36□□□□□ -0.11
HOMER3-204ENST00000539827 KCNQ1DNQ9H478 68 aa14.35□□□□□ -0.11
HOMER3-204ENST00000539827 TRBV7-6A0A0J9YX20 115 aa14.34□□□□□ -0.11
HOMER3-204ENST00000539827 Q6Q795 121 aa14.33□□□□□ -0.12
HOMER3-204ENST00000539827 C9orf163Q8N9P6 203 aa14.33□□□□□ -0.12
HOMER3-204ENST00000539827 MRPL55Q7Z7F7 128 aaKnown RBP14.32□□□□□ -0.12
HOMER3-204ENST00000539827 IGLV1-50A0A075B6I6 118 aa14.31□□□□□ -0.12
HOMER3-204ENST00000539827 A0A1W2PNN7 141 aa14.31□□□□□ -0.12
HOMER3-204ENST00000539827 CHTF8P0CG12 524 aa14.31□□□□□ -0.12
HOMER3-204ENST00000539827 A0A087WTM6 91 aa14.3□□□□□ -0.12
HOMER3-204ENST00000539827 LINC00528Q8N1L1 170 aa14.29□□□□□ -0.12
HOMER3-204ENST00000539827 Q6ZQY7 126 aa14.29□□□□□ -0.12
HOMER3-204ENST00000539827 TMEM256-PLSCR3K7ERE1 68 aa14.27□□□□□ -0.12
HOMER3-204ENST00000539827 PRYO14603 147 aa14.27□□□□□ -0.12
HOMER3-204ENST00000539827 LINC00476Q8WZB0 136 aa14.27□□□□□ -0.12
HOMER3-204ENST00000539827 C1orf134Q5TEV5 83 aa14.25□□□□□ -0.13
HOMER3-204ENST00000539827 SDIM1Q6ZPB5 146 aa14.25□□□□□ -0.13
HOMER3-204ENST00000539827 KMT2AQ03164 3969 aa14.25□□□□□ -0.13
HOMER3-204ENST00000539827 FUSP35637 526 aaKnown RBP eCLIP14.25□□□□□ -0.13
HOMER3-204ENST00000539827 OBSCN-AS1Q96MR7 158 aa14.24□□□□□ -0.13
HOMER3-204ENST00000539827 C14orf132Q9NPU4 83 aa14.23□□□□□ -0.13
HOMER3-204ENST00000539827 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.22□□□□□ -0.13
HOMER3-204ENST00000539827 SPRR1AP35321 89 aa14.22□□□□□ -0.13
HOMER3-204ENST00000539827 DNAH2Q9P225 4427 aa14.22□□□□□ -0.13
HOMER3-204ENST00000539827 ETDCA0A1B0GVM5 59 aa14.21□□□□□ -0.13
HOMER3-204ENST00000539827 KRTAP4-16G5E9R7 235 aaPredicted RBP14.21□□□□□ -0.13
HOMER3-204ENST00000539827 PKIGQ9Y2B9 76 aa14.21□□□□□ -0.13
HOMER3-204ENST00000539827 TRBV7-7A0A0K0K1E9 115 aa14.2□□□□□ -0.14
HOMER3-204ENST00000539827 B5MCH6 92 aa14.2□□□□□ -0.14
HOMER3-204ENST00000539827 LINC00643Q86TS7 51 aa14.2□□□□□ -0.14
HOMER3-204ENST00000539827 C3orf84H3BNL1 204 aa14.19□□□□□ -0.14
HOMER3-204ENST00000539827 PANO1I0J062 215 aa14.19□□□□□ -0.14
HOMER3-204ENST00000539827 DNAH6Q9C0G6 4158 aa14.19□□□□□ -0.14
HOMER3-204ENST00000539827 GAGE2AQ6NT46 116 aa14.18□□□□□ -0.14
HOMER3-204ENST00000539827 ALMS1Q8TCU4 4167 aa14.18□□□□□ -0.14
HOMER3-204ENST00000539827 REG3GQ6UW15 175 aa14.18□□□□□ -0.14
HOMER3-204ENST00000539827 PHF5AQ7RTV0 110 aaKnown RBP14.18□□□□□ -0.14
HOMER3-204ENST00000539827 IMUPQ9GZP8 106 aa14.18□□□□□ -0.14
HOMER3-204ENST00000539827 ANAPC13Q9BS18 74 aa14.17□□□□□ -0.14
HOMER3-204ENST00000539827 Q6ZRX8 168 aa14.16□□□□□ -0.14
HOMER3-204ENST00000539827 LAMTOR3Q9UHA4 124 aa14.16□□□□□ -0.14
HOMER3-204ENST00000539827 JMJD7-PLA2G4BH0Y9G9 81 aa14.16□□□□□ -0.14
HOMER3-204ENST00000539827 RTL8CO15255 209 aa14.16□□□□□ -0.14
HOMER3-204ENST00000539827 DNAH17Q9UFH2 4485 aa14.15□□□□□ -0.14
HOMER3-204ENST00000539827 DPH3Q96FX2 82 aa14.14□□□□□ -0.15
HOMER3-204ENST00000539827 Q9BRP9 147 aa14.14□□□□□ -0.15
HOMER3-204ENST00000539827 H3BQ85 93 aa14.14□□□□□ -0.15
HOMER3-204ENST00000539827 NDUFV3P56181 108 aaKnown RBP14.14□□□□□ -0.15
HOMER3-204ENST00000539827 LINC00474Q9P2X8 69 aa14.14□□□□□ -0.15
HOMER3-204ENST00000539827 DHRS4-AS1Q9P1J3 65 aa14.13□□□□□ -0.15
HOMER3-204ENST00000539827 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.13□□□□□ -0.15
HOMER3-204ENST00000539827 KRTAP11-1Q8IUC1 163 aa14.12□□□□□ -0.15
HOMER3-204ENST00000539827 SMCR5Q8TEV8 140 aa14.12□□□□□ -0.15
HOMER3-204ENST00000539827 UBE2BP63146 152 aa14.11□□□□□ -0.15
HOMER3-204ENST00000539827 TNP2Q05952 138 aa14.11□□□□□ -0.15
HOMER3-204ENST00000539827 GHRHP01286 108 aa14.09□□□□□ -0.15
HOMER3-204ENST00000539827 DEFB105AQ8NG35 78 aa14.09□□□□□ -0.15
HOMER3-204ENST00000539827 SPACA4Q8TDM5 124 aa14.09□□□□□ -0.15
HOMER3-204ENST00000539827 IGLV5-52A0A0A0MRZ9 124 aa14.08□□□□□ -0.16
HOMER3-204ENST00000539827 RBM3P98179 157 aaKnown RBP14.08□□□□□ -0.16
HOMER3-204ENST00000539827 FAM19A1Q7Z5A9 133 aa14.07□□□□□ -0.16
HOMER3-204ENST00000539827 ERC2-IT1O76042 136 aa14.07□□□□□ -0.16
HOMER3-204ENST00000539827 CCKP06307 115 aa14.05□□□□□ -0.16
HOMER3-204ENST00000539827 ST20-AS1Q8NBB2 130 aa14.05□□□□□ -0.16
HOMER3-204ENST00000539827 PRLHP81277 87 aa14.05□□□□□ -0.16
HOMER3-204ENST00000539827 HECTD4Q9Y4D8 3996 aa14.04□□□□□ -0.16
HOMER3-204ENST00000539827 LINC01547P58512 204 aaPredicted RBP14.03□□□□□ -0.16
HOMER3-204ENST00000539827 Q8N377 158 aa14.03□□□□□ -0.16
HOMER3-204ENST00000539827 Q6JHZ5 121 aa14□□□□□ -0.17
HOMER3-204ENST00000539827 Q6ZQT0 140 aa14□□□□□ -0.17
HOMER3-204ENST00000539827 DSCR8Q96T75 97 aa14□□□□□ -0.17
HOMER3-204ENST00000539827 LOC110117498A0A087WWA1 95 aa13.99□□□□□ -0.17
HOMER3-204ENST00000539827 HYDINQ4G0P3 5121 aa13.98□□□□□ -0.17
HOMER3-204ENST00000539827 EPM2AB3EWF7 344 aa13.98□□□□□ -0.17
HOMER3-204ENST00000539827 LINC00846Q9NV44 126 aa13.98□□□□□ -0.17
HOMER3-204ENST00000539827 C3orf22Q8N5N4 141 aa13.96□□□□□ -0.17
HOMER3-204ENST00000539827 HIGD2AQ9BW72 106 aa13.96□□□□□ -0.17
HOMER3-204ENST00000539827 KRTAP10-2P60368 255 aa13.96□□□□□ -0.18
HOMER3-204ENST00000539827 FAM236AA0A1B0GUQ0 79 aa13.95□□□□□ -0.18
HOMER3-204ENST00000539827 FAM236BA0A1B0GV22 79 aa13.95□□□□□ -0.18
HOMER3-204ENST00000539827 IGLV5-48A0A075B6I7 105 aa13.94□□□□□ -0.18
HOMER3-204ENST00000539827 FRAS1Q86XX4 4008 aa13.94□□□□□ -0.18
HOMER3-204ENST00000539827 TRBV7-4A0A0J9YYF1 115 aa13.94□□□□□ -0.18
HOMER3-204ENST00000539827 PDE6GP18545 87 aa13.92□□□□□ -0.18
HOMER3-204ENST00000539827 UBE2AP49459 152 aa13.92□□□□□ -0.18
HOMER3-204ENST00000539827 ATP5EP2Q5VTU8 51 aa13.92□□□□□ -0.18
HOMER3-204ENST00000539827 PLAC8Q9NZF1 115 aa13.91□□□□□ -0.18
HOMER3-204ENST00000539827 DNAH11Q96DT5 4516 aa13.91□□□□□ -0.18
HOMER3-204ENST00000539827 BCE1O60756 84 aa13.91□□□□□ -0.18
HOMER3-204ENST00000539827 H0Y9J4 135 aa13.88□□□□□ -0.19
HOMER3-204ENST00000539827 UBL5Q9BZL1 73 aa13.85□□□□□ -0.19
HOMER3-204ENST00000539827 DNAH5Q8TE73 4624 aa13.85□□□□□ -0.19
HOMER3-204ENST00000539827 SMIM29Q86T20 159 aa13.85□□□□□ -0.19
HOMER3-204ENST00000539827 IGKV3D-7A0A0C4DH55 119 aa13.83□□□□□ -0.19
HOMER3-204ENST00000539827 HIST1H4AP62805 103 aaKnown RBP13.83□□□□□ -0.19
HOMER3-204ENST00000539827 FAM30AQ9NZY2 134 aa13.83□□□□□ -0.19
HOMER3-204ENST00000539827 CCDC179H3BU77 68 aa13.83□□□□□ -0.2
HOMER3-204ENST00000539827 KRTAP13-1Q8IUC0 172 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms