RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 COX17Q14061 63 aa7.83□□□□□ -1.16
PBX3-212ENST00000538998 KRTAP19-2Q3LHN2 52 aa7.83□□□□□ -1.16
PBX3-212ENST00000538998 ZNF625Q96I27 306 aaPredicted RBP7.83□□□□□ -1.16
PBX3-212ENST00000538998 ERG28Q9UKR5 140 aa7.83□□□□□ -1.16
PBX3-212ENST00000538998 MYMXA0A1B0GTQ4 84 aa7.82□□□□□ -1.16
PBX3-212ENST00000538998 Q8N377 158 aa7.82□□□□□ -1.16
PBX3-212ENST00000538998 NMUP48645 174 aa7.81□□□□□ -1.16
PBX3-212ENST00000538998 HERV-K104P63124 156 aa7.81□□□□□ -1.16
PBX3-212ENST00000538998 Q8NDZ9 215 aa7.81□□□□□ -1.16
PBX3-212ENST00000538998 SLC25A20O43772 301 aa7.8□□□□□ -1.16
PBX3-212ENST00000538998 JOSD1Q15040 202 aaPredicted RBP7.8□□□□□ -1.16
PBX3-212ENST00000538998 MEIG1Q5JSS6 88 aa7.8□□□□□ -1.16
PBX3-212ENST00000538998 LORP23490 312 aaPredicted RBP7.79□□□□□ -1.16
PBX3-212ENST00000538998 TSPEAR-AS2P59090 65 aa7.79□□□□□ -1.16
PBX3-212ENST00000538998 ANKRD39Q53RE8 183 aa7.79□□□□□ -1.16
PBX3-212ENST00000538998 A0A0U1RRA0 63 aa7.78□□□□□ -1.16
PBX3-212ENST00000538998 LINC00587B1AMM8 73 aa7.78□□□□□ -1.16
PBX3-212ENST00000538998 LINC00158P58513 81 aa7.78□□□□□ -1.16
PBX3-212ENST00000538998 LINC00483Q53H64 154 aa7.78□□□□□ -1.16
PBX3-212ENST00000538998 ZNF815PA8K554 130 aa7.77□□□□□ -1.17
PBX3-212ENST00000538998 KRTAP10-6P60371 365 aaPredicted RBP7.77□□□□□ -1.17
PBX3-212ENST00000538998 VAMP8Q9BV40 100 aa7.77□□□□□ -1.17
PBX3-212ENST00000538998 PRYO14603 147 aa7.76□□□□□ -1.17
PBX3-212ENST00000538998 MOBPQ13875 183 aa7.76□□□□□ -1.17
PBX3-212ENST00000538998 SSBP3-AS1Q7Z2R9 100 aa7.76□□□□□ -1.17
PBX3-212ENST00000538998 SMCR5Q8TEV8 140 aa7.76□□□□□ -1.17
PBX3-212ENST00000538998 SMIM13P0DJ93 91 aa7.75□□□□□ -1.17
PBX3-212ENST00000538998 TTTY13Q9BZ97 58 aa7.75□□□□□ -1.17
PBX3-212ENST00000538998 IGLV9-49A0A0B4J1Y8 123 aa7.74□□□□□ -1.17
PBX3-212ENST00000538998 PYY3Q5JQD4 70 aa7.74□□□□□ -1.17
PBX3-212ENST00000538998 SCGB1D4Q6XE38 83 aa7.74□□□□□ -1.17
PBX3-212ENST00000538998 PAM16Q9Y3D7 125 aa7.74□□□□□ -1.17
PBX3-212ENST00000538998 IGLV8-61A0A075B6I0 122 aa7.73□□□□□ -1.17
PBX3-212ENST00000538998 A0A0J9YXY3 114 aa7.73□□□□□ -1.17
PBX3-212ENST00000538998 ETDCA0A1B0GVM5 59 aa7.73□□□□□ -1.17
PBX3-212ENST00000538998 SPRR1AP35321 89 aa7.73□□□□□ -1.17
PBX3-212ENST00000538998 SPATA45Q537H7 98 aa7.73□□□□□ -1.17
PBX3-212ENST00000538998 GAGE2AQ6NT46 116 aa7.73□□□□□ -1.17
PBX3-212ENST00000538998 S100A12P80511 92 aa7.72□□□□□ -1.17
PBX3-212ENST00000538998 PCOTHQ58A44 107 aa7.72□□□□□ -1.17
PBX3-212ENST00000538998 PCP2Q8IVA1 136 aa7.72□□□□□ -1.17
PBX3-212ENST00000538998 KCNQ1DNQ9H478 68 aa7.72□□□□□ -1.17
PBX3-212ENST00000538998 KRTAP4-16G5E9R7 235 aaPredicted RBP7.71□□□□□ -1.18
PBX3-212ENST00000538998 MIR7-3HGQ8N6C7 128 aa7.71□□□□□ -1.18
PBX3-212ENST00000538998 KRTAP9-7A8MTY7 169 aa7.7□□□□□ -1.18
PBX3-212ENST00000538998 M0R2T5 61 aa7.7□□□□□ -1.18
PBX3-212ENST00000538998 MIEN1Q9BRT3 115 aa7.7□□□□□ -1.18
PBX3-212ENST00000538998 TIMM17BO60830 172 aa7.69□□□□□ -1.18
PBX3-212ENST00000538998 C14orf144Q96I85 54 aa7.69□□□□□ -1.18
PBX3-212ENST00000538998 LOC105371267A0A1B0GV96 52 aa7.68□□□□□ -1.18
PBX3-212ENST00000538998 COX8AP10176 69 aa7.68□□□□□ -1.18
PBX3-212ENST00000538998 NCR3O14931 201 aa7.67□□□□□ -1.18
PBX3-212ENST00000538998 NPC2P61916 151 aa7.67□□□□□ -1.18
PBX3-212ENST00000538998 BOD1L2Q8IYS8 172 aa7.67□□□□□ -1.18
PBX3-212ENST00000538998 ADAMTSL4-AS1Q5T5F5 129 aa7.66□□□□□ -1.18
PBX3-212ENST00000538998 SLC25A34Q6PIV7 304 aa7.66□□□□□ -1.18
PBX3-212ENST00000538998 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.65□□□□□ -1.18
PBX3-212ENST00000538998 ERC2-IT1O76042 136 aa7.65□□□□□ -1.18
PBX3-212ENST00000538998 SMIM6P0DI80 62 aa7.65□□□□□ -1.18
PBX3-212ENST00000538998 COPS9Q8WXC6 57 aa7.65□□□□□ -1.18
PBX3-212ENST00000538998 TRBV10-3A0A0K0K1G6 114 aa7.64□□□□□ -1.19
PBX3-212ENST00000538998 B5MCH6 92 aa7.64□□□□□ -1.19
PBX3-212ENST00000538998 DLEU1O43261 78 aa7.64□□□□□ -1.19
PBX3-212ENST00000538998 C9orf153Q5TBE3 101 aa7.64□□□□□ -1.19
PBX3-212ENST00000538998 Q6ZVH6 145 aa7.63□□□□□ -1.19
PBX3-212ENST00000538998 LINC00308Q8TCZ7 52 aa7.63□□□□□ -1.19
PBX3-212ENST00000538998 LITAFQ99732 161 aa7.63□□□□□ -1.19
PBX3-212ENST00000538998 SPANXDQ9BXN6 97 aa7.63□□□□□ -1.19
PBX3-212ENST00000538998 SPANXCQ9NY87 97 aa7.63□□□□□ -1.19
PBX3-212ENST00000538998 IFITM1P13164 125 aa7.62□□□□□ -1.19
PBX3-212ENST00000538998 HIST1H4GQ99525 98 aa7.62□□□□□ -1.19
PBX3-212ENST00000538998 C9orf92A6NGG3 77 aa7.61□□□□□ -1.19
PBX3-212ENST00000538998 COX6B2Q6YFQ2 88 aa7.61□□□□□ -1.19
PBX3-212ENST00000538998 Q9BRP9 147 aa7.61□□□□□ -1.19
PBX3-212ENST00000538998 LIMD2Q9BT23 127 aa7.61□□□□□ -1.19
PBX3-212ENST00000538998 LOC107984156A0A0G2JMH3 177 aa7.6□□□□□ -1.19
PBX3-212ENST00000538998 SOSTDC1Q6X4U4 206 aa7.6□□□□□ -1.19
PBX3-212ENST00000538998 Q6ZRX8 168 aa7.6□□□□□ -1.19
PBX3-212ENST00000538998 MUSTN1Q8IVN3 82 aa7.6□□□□□ -1.19
PBX3-212ENST00000538998 ARL17AQ8IVW1 177 aa7.6□□□□□ -1.19
PBX3-212ENST00000538998 SPANXB1Q9NS25 103 aaPredicted RBP7.6□□□□□ -1.19
PBX3-212ENST00000538998 UQCR10Q9UDW1 63 aa7.6□□□□□ -1.19
PBX3-212ENST00000538998 C12orf57Q99622 126 aa7.59□□□□□ -1.19
PBX3-212ENST00000538998 PRO1933Q9H354 126 aa7.59□□□□□ -1.19
PBX3-212ENST00000538998 NDUFC2O95298 119 aa7.58□□□□□ -1.2
PBX3-212ENST00000538998 HIGD1BQ9P298 99 aa7.58□□□□□ -1.2
PBX3-212ENST00000538998 EIF4EBP3O60516 100 aaPredicted RBP7.57□□□□□ -1.2
PBX3-212ENST00000538998 DDTP30046 118 aa7.57□□□□□ -1.2
PBX3-212ENST00000538998 S100A7L2Q5SY68 101 aa7.57□□□□□ -1.2
PBX3-212ENST00000538998 OR13C6PQ8NH95 151 aa7.57□□□□□ -1.2
PBX3-212ENST00000538998 IGLV6-57P01721 117 aa7.56□□□□□ -1.2
PBX3-212ENST00000538998 LINC00518Q8N0U6 118 aa7.56□□□□□ -1.2
PBX3-212ENST00000538998 TRBV10-2A0A0K0K1G8 114 aa7.55□□□□□ -1.2
PBX3-212ENST00000538998 C2orf91Q6ZV80 131 aa7.55□□□□□ -1.2
PBX3-212ENST00000538998 FLGP20930 4061 aaPredicted RBP7.54□□□□□ -1.2
PBX3-212ENST00000538998 TSTD3H0UI37 97 aa7.54□□□□□ -1.2
PBX3-212ENST00000538998 TAL2Q16559 108 aa7.54□□□□□ -1.2
PBX3-212ENST00000538998 A4D1N5 150 aa7.53□□□□□ -1.2
PBX3-212ENST00000538998 A6NDN8 102 aa7.53□□□□□ -1.2
PBX3-212ENST00000538998 LCE2BO14633 110 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms