RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 LINC00337Q8N6G1 96 aa3.54□□□□□ -1.84
VPS11-204ENST00000530809 RMI2Q96E14 147 aa3.54□□□□□ -1.84
VPS11-204ENST00000530809 C2orf48Q96LS8 159 aa3.54□□□□□ -1.84
VPS11-204ENST00000530809 C1orf43Q9BWL3 253 aa3.54□□□□□ -1.84
VPS11-204ENST00000530809 TMEM126AQ9H061 195 aa3.54□□□□□ -1.84
VPS11-204ENST00000530809 KLK12Q9UKR0 248 aa3.54□□□□□ -1.84
VPS11-204ENST00000530809 IGKV2-28A0A075B6P5 120 aa3.53□□□□□ -1.84
VPS11-204ENST00000530809 IGKV2D-28P01615 120 aa3.53□□□□□ -1.84
VPS11-204ENST00000530809 ACYP1P07311 99 aa3.53□□□□□ -1.84
VPS11-204ENST00000530809 PFN2P35080 140 aa3.53□□□□□ -1.84
VPS11-204ENST00000530809 ENHOQ6UWT2 76 aa3.53□□□□□ -1.84
VPS11-204ENST00000530809 MTURNQ8N3F0 131 aa3.53□□□□□ -1.84
VPS11-204ENST00000530809 IGLV10-54A0A075B6I4 117 aa3.52□□□□□ -1.85
VPS11-204ENST00000530809 KRTAP10-4P60372 401 aaPredicted RBP3.52□□□□□ -1.85
VPS11-204ENST00000530809 SCXQ7RTU7 201 aa3.52□□□□□ -1.85
VPS11-204ENST00000530809 CLEC2BQ92478 149 aa3.52□□□□□ -1.85
VPS11-204ENST00000530809 SIGMAR1Q99720 223 aa3.52□□□□□ -1.85
VPS11-204ENST00000530809 SMIM11BQ8TCY0 68 aa3.51□□□□□ -1.85
VPS11-204ENST00000530809 CAMK2N2Q96S95 79 aa3.51□□□□□ -1.85
VPS11-204ENST00000530809 TRBV7-6A0A0J9YX20 115 aa3.5□□□□□ -1.85
VPS11-204ENST00000530809 NDUFC2-KCTD14E9PQ53 114 aa3.5□□□□□ -1.85
VPS11-204ENST00000530809 PCP4P48539 62 aa3.5□□□□□ -1.85
VPS11-204ENST00000530809 S100A7L2Q5SY68 101 aa3.5□□□□□ -1.85
VPS11-204ENST00000530809 KRTAP26-1Q6PEX3 210 aa3.5□□□□□ -1.85
VPS11-204ENST00000530809 OR13C6PQ8NH95 151 aa3.5□□□□□ -1.85
VPS11-204ENST00000530809 LINC00167Q96N53 147 aa3.5□□□□□ -1.85
VPS11-204ENST00000530809 Q9HAA7 133 aa3.5□□□□□ -1.85
VPS11-204ENST00000530809 FAT1Q14517 4588 aa3.49□□□□□ -1.85
VPS11-204ENST00000530809 TEX49A0A1B0GTD5 131 aa3.49□□□□□ -1.85
VPS11-204ENST00000530809 TMEM256-PLSCR3K7ERE1 68 aa3.49□□□□□ -1.85
VPS11-204ENST00000530809 IGLV6-57P01721 117 aa3.49□□□□□ -1.85
VPS11-204ENST00000530809 TLX1NBP0CAT3 122 aa3.49□□□□□ -1.85
VPS11-204ENST00000530809 RPL37AP61513 92 aaKnown RBP3.49□□□□□ -1.85
VPS11-204ENST00000530809 CIRBP-AS1Q8TBR5 109 aa3.49□□□□□ -1.85
VPS11-204ENST00000530809 ORMDL1Q9P0S3 153 aa3.49□□□□□ -1.85
VPS11-204ENST00000530809 C6orf48Q9UBA6 75 aa3.49□□□□□ -1.85
VPS11-204ENST00000530809 PKIGQ9Y2B9 76 aa3.49□□□□□ -1.85
VPS11-204ENST00000530809 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.48□□□□□ -1.85
VPS11-204ENST00000530809 JMJD7-PLA2G4BH0Y9G9 81 aa3.48□□□□□ -1.85
VPS11-204ENST00000530809 BAALC-AS2P0C853 105 aa3.48□□□□□ -1.85
VPS11-204ENST00000530809 Q6Q795 121 aa3.48□□□□□ -1.85
VPS11-204ENST00000530809 UNQ6190/PRO20217Q6UXQ8 127 aa3.48□□□□□ -1.85
VPS11-204ENST00000530809 Q6ZRU5 148 aa3.48□□□□□ -1.85
VPS11-204ENST00000530809 C15orf56Q8N910 161 aa3.48□□□□□ -1.85
VPS11-204ENST00000530809 DIRC1Q969H9 104 aa3.48□□□□□ -1.85
VPS11-204ENST00000530809 HMCN2Q8NDA2 5059 aa3.48□□□□□ -1.85
VPS11-204ENST00000530809 IGKV2D-24A0A075B6R9 120 aa3.47□□□□□ -1.85
VPS11-204ENST00000530809 TRAV23DV6A0A075B6W5 121 aa3.47□□□□□ -1.85
VPS11-204ENST00000530809 M0R378 163 aa3.47□□□□□ -1.85
VPS11-204ENST00000530809 LECT2O14960 151 aa3.47□□□□□ -1.85
VPS11-204ENST00000530809 MT1HL1P0DM35 61 aa3.47□□□□□ -1.85
VPS11-204ENST00000530809 SYCNQ0VAF6 134 aa3.47□□□□□ -1.85
VPS11-204ENST00000530809 OBSCN-AS1Q96MR7 158 aa3.47□□□□□ -1.85
VPS11-204ENST00000530809 FAM218AQ96MZ4 157 aa3.47□□□□□ -1.85
VPS11-204ENST00000530809 A0A087WYN8 130 aa3.46□□□□□ -1.86
VPS11-204ENST00000530809 NCR3O14931 201 aa3.46□□□□□ -1.86
VPS11-204ENST00000530809 PDE6GP18545 87 aa3.46□□□□□ -1.86
VPS11-204ENST00000530809 C6orf99Q4VX62 202 aa3.46□□□□□ -1.86
VPS11-204ENST00000530809 C14orf177Q52M58 125 aa3.46□□□□□ -1.86
VPS11-204ENST00000530809 C9orf116Q5BN46 136 aaPredicted RBP3.46□□□□□ -1.86
VPS11-204ENST00000530809 C10orf25Q5T742 122 aa3.46□□□□□ -1.86
VPS11-204ENST00000530809 IMUPQ9GZP8 106 aa3.46□□□□□ -1.86
VPS11-204ENST00000530809 IGLV5-37A0A075B6J1 123 aa3.45□□□□□ -1.86
VPS11-204ENST00000530809 A0A1B0GV72 72 aa3.45□□□□□ -1.86
VPS11-204ENST00000530809 hADV29S1A0JD25 119 aa3.45□□□□□ -1.86
VPS11-204ENST00000530809 ZNF73O43830 326 aaPredicted RBP3.45□□□□□ -1.86
VPS11-204ENST00000530809 VPREB1P12018 145 aa3.45□□□□□ -1.86
VPS11-204ENST00000530809 RPL18AQ02543 176 aaKnown RBP3.45□□□□□ -1.86
VPS11-204ENST00000530809 HIGD2BQ4VC39 106 aa3.45□□□□□ -1.86
VPS11-204ENST00000530809 XP32Q5T750 250 aa3.45□□□□□ -1.86
VPS11-204ENST00000530809 ATP5EP2Q5VTU8 51 aa3.45□□□□□ -1.86
VPS11-204ENST00000530809 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.45□□□□□ -1.86
VPS11-204ENST00000530809 LINC00575Q6W349 94 aa3.45□□□□□ -1.86
VPS11-204ENST00000530809 LINC00643Q86TS7 51 aa3.45□□□□□ -1.86
VPS11-204ENST00000530809 TRBV7-7A0A0K0K1E9 115 aa3.44□□□□□ -1.86
VPS11-204ENST00000530809 ELOF1P60002 83 aaKnown RBP3.44□□□□□ -1.86
VPS11-204ENST00000530809 SDIM1Q6ZPB5 146 aa3.44□□□□□ -1.86
VPS11-204ENST00000530809 NKAPP1Q8N9T2 125 aa3.44□□□□□ -1.86
VPS11-204ENST00000530809 TRBV10-3A0A0K0K1G6 114 aa3.43□□□□□ -1.86
VPS11-204ENST00000530809 LOC107984640A0A0U1RRK4 108 aa3.43□□□□□ -1.86
VPS11-204ENST00000530809 USP17L23D6RBM5 183 aa3.43□□□□□ -1.86
VPS11-204ENST00000530809 PRYO14603 147 aa3.43□□□□□ -1.86
VPS11-204ENST00000530809 MT-ATP8P03928 68 aa3.43□□□□□ -1.86
VPS11-204ENST00000530809 COX7BP24311 80 aa3.43□□□□□ -1.86
VPS11-204ENST00000530809 GAGE2BQ13066 116 aa3.43□□□□□ -1.86
VPS11-204ENST00000530809 GAGE2EQ4V326 116 aa3.43□□□□□ -1.86
VPS11-204ENST00000530809 GAGE2DQ9UEU5 116 aa3.43□□□□□ -1.86
VPS11-204ENST00000530809 C22orf24Q9Y442 160 aa3.43□□□□□ -1.86
VPS11-204ENST00000530809 LRP1Q07954 4544 aaKnown RBP3.42□□□□□ -1.86
VPS11-204ENST00000530809 LOC110117498A0A087WWA1 95 aa3.42□□□□□ -1.86
VPS11-204ENST00000530809 CNBPP62633 177 aaKnown RBP3.42□□□□□ -1.86
VPS11-204ENST00000530809 Q6ZRP5 223 aa3.42□□□□□ -1.86
VPS11-204ENST00000530809 Q8NDZ9 215 aa3.42□□□□□ -1.86
VPS11-204ENST00000530809 LINC00526Q96FQ7 95 aa3.42□□□□□ -1.86
VPS11-204ENST00000530809 KCNQ1DNQ9H478 68 aa3.42□□□□□ -1.86
VPS11-204ENST00000530809 XAGE1AQ9HD64 81 aa3.42□□□□□ -1.86
VPS11-204ENST00000530809 B5MCH6 92 aa3.41□□□□□ -1.86
VPS11-204ENST00000530809 CCKP06307 115 aa3.41□□□□□ -1.86
VPS11-204ENST00000530809 PRR3P79522 188 aaKnown RBP3.41□□□□□ -1.86
VPS11-204ENST00000530809 RBM3P98179 157 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms