RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 NCR3O14931 201 aa9.02□□□□□ -0.97
TRAM1-204ENST00000521049 SMIM13P0DJ93 91 aa9.02□□□□□ -0.97
TRAM1-204ENST00000521049 TMA7Q9Y2S6 64 aaKnown RBP9.02□□□□□ -0.97
TRAM1-204ENST00000521049 TRBV10-3A0A0K0K1G6 114 aa9.01□□□□□ -0.97
TRAM1-204ENST00000521049 B5MCH6 92 aa9.01□□□□□ -0.97
TRAM1-204ENST00000521049 ERC2-IT1O76042 136 aa9.01□□□□□ -0.97
TRAM1-204ENST00000521049 S100A12P80511 92 aa9.01□□□□□ -0.97
TRAM1-204ENST00000521049 MAP1LC3CQ9BXW4 147 aa9□□□□□ -0.97
TRAM1-204ENST00000521049 MIR7-3HGQ8N6C7 128 aa8.99□□□□□ -0.97
TRAM1-204ENST00000521049 LINC00587B1AMM8 73 aa8.98□□□□□ -0.97
TRAM1-204ENST00000521049 PLNP26678 52 aa8.98□□□□□ -0.97
TRAM1-204ENST00000521049 COA6Q5JTJ3 125 aaKnown RBP8.98□□□□□ -0.97
TRAM1-204ENST00000521049 PMCHL2Q9BQD1 86 aa8.98□□□□□ -0.97
TRAM1-204ENST00000521049 HERV-K104P63124 156 aa8.97□□□□□ -0.97
TRAM1-204ENST00000521049 MEIG1Q5JSS6 88 aa8.97□□□□□ -0.97
TRAM1-204ENST00000521049 IGLV8-61A0A075B6I0 122 aa8.96□□□□□ -0.98
TRAM1-204ENST00000521049 DPM2O94777 84 aa8.96□□□□□ -0.98
TRAM1-204ENST00000521049 PCOTHQ58A44 107 aa8.96□□□□□ -0.98
TRAM1-204ENST00000521049 Q9BRP9 147 aa8.96□□□□□ -0.98
TRAM1-204ENST00000521049 IGKCP01834 107 aa8.95□□□□□ -0.98
TRAM1-204ENST00000521049 ANKRD39Q53RE8 183 aa8.95□□□□□ -0.98
TRAM1-204ENST00000521049 SYS1-DBNDD2H3BUS1 97 aa8.94□□□□□ -0.98
TRAM1-204ENST00000521049 KRTAP10-6P60371 365 aaPredicted RBP8.94□□□□□ -0.98
TRAM1-204ENST00000521049 Q6ZRX8 168 aa8.94□□□□□ -0.98
TRAM1-204ENST00000521049 LOC107984156A0A0G2JMH3 177 aa8.93□□□□□ -0.98
TRAM1-204ENST00000521049 TRBV10-2A0A0K0K1G8 114 aa8.93□□□□□ -0.98
TRAM1-204ENST00000521049 DDTP30046 118 aa8.93□□□□□ -0.98
TRAM1-204ENST00000521049 ARL17AQ8IVW1 177 aa8.93□□□□□ -0.98
TRAM1-204ENST00000521049 HERVK_113P61574 105 aa8.92□□□□□ -0.98
TRAM1-204ENST00000521049 C9orf153Q5TBE3 101 aa8.92□□□□□ -0.98
TRAM1-204ENST00000521049 LEPROTO15243 131 aa8.91□□□□□ -0.98
TRAM1-204ENST00000521049 PET117Q6UWS5 81 aa8.91□□□□□ -0.98
TRAM1-204ENST00000521049 MYMXA0A1B0GTQ4 84 aa8.9□□□□□ -0.98
TRAM1-204ENST00000521049 C3orf79P0CE67 100 aa8.9□□□□□ -0.98
TRAM1-204ENST00000521049 LINC01545Q5VT33 79 aa8.9□□□□□ -0.98
TRAM1-204ENST00000521049 TSPEAR-AS2P59090 65 aa8.89□□□□□ -0.99
TRAM1-204ENST00000521049 JOSD1Q15040 202 aaPredicted RBP8.89□□□□□ -0.99
TRAM1-204ENST00000521049 C5orf52A6NGY3 159 aa8.88□□□□□ -0.99
TRAM1-204ENST00000521049 J3QQQ9 107 aa8.88□□□□□ -0.99
TRAM1-204ENST00000521049 KRTDAPP60985 99 aa8.88□□□□□ -0.99
TRAM1-204ENST00000521049 LGALS3P17931 250 aaKnown RBP8.87□□□□□ -0.99
TRAM1-204ENST00000521049 LIMD2Q9BT23 127 aa8.87□□□□□ -0.99
TRAM1-204ENST00000521049 C9orf92A6NGG3 77 aa8.86□□□□□ -0.99
TRAM1-204ENST00000521049 IGLV6-57P01721 117 aa8.86□□□□□ -0.99
TRAM1-204ENST00000521049 SPANXB1Q9NS25 103 aaPredicted RBP8.86□□□□□ -0.99
TRAM1-204ENST00000521049 E9PLD3 99 aa8.85□□□□□ -0.99
TRAM1-204ENST00000521049 NMUP48645 174 aa8.85□□□□□ -0.99
TRAM1-204ENST00000521049 M0R2T5 61 aa8.84□□□□□ -0.99
TRAM1-204ENST00000521049 NDUFC2O95298 119 aa8.84□□□□□ -0.99
TRAM1-204ENST00000521049 S100A7L2Q5SY68 101 aa8.84□□□□□ -0.99
TRAM1-204ENST00000521049 ST20-AS1Q8NBB2 130 aa8.84□□□□□ -0.99
TRAM1-204ENST00000521049 C20orf202A1L168 122 aa8.83□□□□□ -1
TRAM1-204ENST00000521049 S100A6P06703 90 aa8.83□□□□□ -1
TRAM1-204ENST00000521049 HIST3H2BBQ8N257 126 aa8.83□□□□□ -1
TRAM1-204ENST00000521049 TRAV23DV6A0A075B6W5 121 aa8.82□□□□□ -1
TRAM1-204ENST00000521049 LOC100996750A0A140TA64 210 aa8.82□□□□□ -1
TRAM1-204ENST00000521049 S100A2P29034 98 aa8.82□□□□□ -1
TRAM1-204ENST00000521049 KRTAP4-6Q9BYQ5 205 aa8.82□□□□□ -1
TRAM1-204ENST00000521049 ZNF73O43830 326 aaPredicted RBP8.81□□□□□ -1
TRAM1-204ENST00000521049 SPRR1BP22528 89 aa8.81□□□□□ -1
TRAM1-204ENST00000521049 HIST1H2BLQ99880 126 aa8.81□□□□□ -1
TRAM1-204ENST00000521049 MIEN1Q9BRT3 115 aa8.81□□□□□ -1
TRAM1-204ENST00000521049 SLC25A34Q6PIV7 304 aa8.8□□□□□ -1
TRAM1-204ENST00000521049 HRCT1Q6UXD1 115 aa8.8□□□□□ -1
TRAM1-204ENST00000521049 H3BS24 57 aa8.79□□□□□ -1
TRAM1-204ENST00000521049 A0A0J9YXY3 114 aa8.78□□□□□ -1
TRAM1-204ENST00000521049 HINT1P49773 126 aaPredicted RBP8.78□□□□□ -1
TRAM1-204ENST00000521049 AKR1D1P51857 326 aa8.78□□□□□ -1
TRAM1-204ENST00000521049 SNRPEP62304 92 aaKnown RBP8.77□□□□□ -1.01
TRAM1-204ENST00000521049 ATOH7Q8N100 152 aa8.77□□□□□ -1.01
TRAM1-204ENST00000521049 CBY1Q9Y3M2 126 aa8.77□□□□□ -1.01
TRAM1-204ENST00000521049 ZNF815PA8K554 130 aa8.76□□□□□ -1.01
TRAM1-204ENST00000521049 CD164Q04900 197 aa8.76□□□□□ -1.01
TRAM1-204ENST00000521049 COX6B2Q6YFQ2 88 aa8.76□□□□□ -1.01
TRAM1-204ENST00000521049 LAMTOR3Q9UHA4 124 aa8.76□□□□□ -1.01
TRAM1-204ENST00000521049 FLGP20930 4061 aaPredicted RBP8.74□□□□□ -1.01
TRAM1-204ENST00000521049 ADAMTSL4-AS1Q5T5F5 129 aa8.74□□□□□ -1.01
TRAM1-204ENST00000521049 TTTY13Q9BZ97 58 aa8.74□□□□□ -1.01
TRAM1-204ENST00000521049 RPL37P61927 97 aaKnown RBP8.73□□□□□ -1.01
TRAM1-204ENST00000521049 Q5XG85 94 aa8.73□□□□□ -1.01
TRAM1-204ENST00000521049 DHRS4-AS1Q9P1J3 65 aa8.73□□□□□ -1.01
TRAM1-204ENST00000521049 TIMM17BO60830 172 aa8.72□□□□□ -1.01
TRAM1-204ENST00000521049 NPC2P61916 151 aa8.72□□□□□ -1.01
TRAM1-204ENST00000521049 SOSTDC1Q6X4U4 206 aa8.72□□□□□ -1.01
TRAM1-204ENST00000521049 KRTAP9-7A8MTY7 169 aa8.71□□□□□ -1.02
TRAM1-204ENST00000521049 LITAFQ99732 161 aa8.71□□□□□ -1.02
TRAM1-204ENST00000521049 PRO1933Q9H354 126 aa8.71□□□□□ -1.02
TRAM1-204ENST00000521049 C1orf195Q5TG92 126 aa8.69□□□□□ -1.02
TRAM1-204ENST00000521049 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.68□□□□□ -1.02
TRAM1-204ENST00000521049 H7C2G1 150 aa8.68□□□□□ -1.02
TRAM1-204ENST00000521049 SCGB1D4Q6XE38 83 aa8.68□□□□□ -1.02
TRAM1-204ENST00000521049 LINC00308Q8TCZ7 52 aa8.68□□□□□ -1.02
TRAM1-204ENST00000521049 HSBP1L1C9JCN9 74 aa8.67□□□□□ -1.02
TRAM1-204ENST00000521049 SCGB1D1O95968 90 aa8.67□□□□□ -1.02
TRAM1-204ENST00000521049 PCP2Q8IVA1 136 aa8.67□□□□□ -1.02
TRAM1-204ENST00000521049 TAL2Q16559 108 aa8.66□□□□□ -1.02
TRAM1-204ENST00000521049 C21orf62-AS1Q17RA5 79 aa8.65□□□□□ -1.02
TRAM1-204ENST00000521049 Q1RN00 199 aa8.65□□□□□ -1.02
TRAM1-204ENST00000521049 OR13C6PQ8NH95 151 aa8.65□□□□□ -1.02
TRAM1-204ENST00000521049 TEX49A0A1B0GTD5 131 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms