RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 KRTAP4-16G5E9R7 235 aaPredicted RBP3.45□□□□□ -1.86
SCARNA20.4-201ENST00000516969 SNCGO76070 127 aa3.45□□□□□ -1.86
SCARNA20.4-201ENST00000516969 COX7BP24311 80 aa3.45□□□□□ -1.86
SCARNA20.4-201ENST00000516969 SPRR1AP35321 89 aa3.45□□□□□ -1.86
SCARNA20.4-201ENST00000516969 C1orf134Q5TEV5 83 aa3.45□□□□□ -1.86
SCARNA20.4-201ENST00000516969 MRPL55Q7Z7F7 128 aaKnown RBP3.45□□□□□ -1.86
SCARNA20.4-201ENST00000516969 LINC00528Q8N1L1 170 aa3.45□□□□□ -1.86
SCARNA20.4-201ENST00000516969 SVIPQ8NHG7 77 aa3.45□□□□□ -1.86
SCARNA20.4-201ENST00000516969 LINC00476Q8WZB0 136 aa3.45□□□□□ -1.86
SCARNA20.4-201ENST00000516969 ORMDL1Q9P0S3 153 aa3.45□□□□□ -1.86
SCARNA20.4-201ENST00000516969 PKIGQ9Y2B9 76 aa3.45□□□□□ -1.86
SCARNA20.4-201ENST00000516969 DNAH17Q9UFH2 4485 aa3.44□□□□□ -1.86
SCARNA20.4-201ENST00000516969 H3BQ85 93 aa3.44□□□□□ -1.86
SCARNA20.4-201ENST00000516969 TMEM256-PLSCR3K7ERE1 68 aa3.44□□□□□ -1.86
SCARNA20.4-201ENST00000516969 PRYO14603 147 aa3.44□□□□□ -1.86
SCARNA20.4-201ENST00000516969 LY6G6CO95867 125 aa3.44□□□□□ -1.86
SCARNA20.4-201ENST00000516969 INAFM2P0DMQ5 153 aa3.44□□□□□ -1.86
SCARNA20.4-201ENST00000516969 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.44□□□□□ -1.86
SCARNA20.4-201ENST00000516969 RPL37AP8A6NKH3 93 aa3.43□□□□□ -1.86
SCARNA20.4-201ENST00000516969 FAM19A5Q7Z5A7 132 aaPredicted RBP3.43□□□□□ -1.86
SCARNA20.4-201ENST00000516969 CDIP1Q9H305 208 aa3.43□□□□□ -1.86
SCARNA20.4-201ENST00000516969 LINC00474Q9P2X8 69 aa3.43□□□□□ -1.86
SCARNA20.4-201ENST00000516969 IGKV2-24A0A0C4DH68 120 aa3.42□□□□□ -1.86
SCARNA20.4-201ENST00000516969 FAM240AA0A1B0GVK7 77 aa3.42□□□□□ -1.86
SCARNA20.4-201ENST00000516969 B5MCH6 92 aa3.42□□□□□ -1.86
SCARNA20.4-201ENST00000516969 CHTF8P0CG12 524 aa3.42□□□□□ -1.86
SCARNA20.4-201ENST00000516969 VPS25Q9BRG1 176 aa3.42□□□□□ -1.86
SCARNA20.4-201ENST00000516969 PANO1I0J062 215 aa3.41□□□□□ -1.86
SCARNA20.4-201ENST00000516969 REG3GQ6UW15 175 aa3.41□□□□□ -1.86
SCARNA20.4-201ENST00000516969 Q6ZQY7 126 aa3.41□□□□□ -1.86
SCARNA20.4-201ENST00000516969 Q6ZRX8 168 aa3.41□□□□□ -1.86
SCARNA20.4-201ENST00000516969 SPACA4Q8TDM5 124 aa3.41□□□□□ -1.86
SCARNA20.4-201ENST00000516969 Q9BRP9 147 aa3.41□□□□□ -1.86
SCARNA20.4-201ENST00000516969 DHRS4-AS1Q9P1J3 65 aa3.41□□□□□ -1.86
SCARNA20.4-201ENST00000516969 ETDCA0A1B0GVM5 59 aa3.4□□□□□ -1.87
SCARNA20.4-201ENST00000516969 JMJD7-PLA2G4BH0Y9G9 81 aa3.4□□□□□ -1.87
SCARNA20.4-201ENST00000516969 RTL8CO15255 209 aa3.4□□□□□ -1.87
SCARNA20.4-201ENST00000516969 GHRHP01286 108 aa3.4□□□□□ -1.87
SCARNA20.4-201ENST00000516969 TNP2Q05952 138 aa3.4□□□□□ -1.87
SCARNA20.4-201ENST00000516969 PHF5AQ7RTV0 110 aaKnown RBP3.4□□□□□ -1.87
SCARNA20.4-201ENST00000516969 KRTAP11-1Q8IUC1 163 aa3.4□□□□□ -1.87
SCARNA20.4-201ENST00000516969 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.4□□□□□ -1.87
SCARNA20.4-201ENST00000516969 FAT2Q9NYQ8 4349 aa3.39□□□□□ -1.87
SCARNA20.4-201ENST00000516969 H0Y9J4 135 aa3.39□□□□□ -1.87
SCARNA20.4-201ENST00000516969 ACYP1P07311 99 aa3.39□□□□□ -1.87
SCARNA20.4-201ENST00000516969 FUSP35637 526 aaKnown RBP eCLIP3.39□□□□□ -1.87
SCARNA20.4-201ENST00000516969 LINC01547P58512 204 aaPredicted RBP3.39□□□□□ -1.87
SCARNA20.4-201ENST00000516969 C14orf132Q9NPU4 83 aa3.39□□□□□ -1.87
SCARNA20.4-201ENST00000516969 DNAH11Q96DT5 4516 aa3.38□□□□□ -1.87
SCARNA20.4-201ENST00000516969 IGLV5-48A0A075B6I7 105 aa3.38□□□□□ -1.87
SCARNA20.4-201ENST00000516969 LOC110117498A0A087WWA1 95 aa3.38□□□□□ -1.87
SCARNA20.4-201ENST00000516969 IGLV5-52A0A0A0MRZ9 124 aa3.38□□□□□ -1.87
SCARNA20.4-201ENST00000516969 ERC2-IT1O76042 136 aa3.38□□□□□ -1.87
SCARNA20.4-201ENST00000516969 CCKP06307 115 aa3.38□□□□□ -1.87
SCARNA20.4-201ENST00000516969 NDUFV3P56181 108 aaKnown RBP3.38□□□□□ -1.87
SCARNA20.4-201ENST00000516969 RBM3P98179 157 aaKnown RBP3.38□□□□□ -1.87
SCARNA20.4-201ENST00000516969 Q8N377 158 aa3.38□□□□□ -1.87
SCARNA20.4-201ENST00000516969 SMCR5Q8TEV8 140 aa3.38□□□□□ -1.87
SCARNA20.4-201ENST00000516969 SIGMAR1Q99720 223 aa3.38□□□□□ -1.87
SCARNA20.4-201ENST00000516969 PLAC8Q9NZF1 115 aa3.38□□□□□ -1.87
SCARNA20.4-201ENST00000516969 PKD1P98161 4303 aa3.38□□□□□ -1.87
SCARNA20.4-201ENST00000516969 SRRM2Q9UQ35 2752 aaKnown RBP3.37□□□□□ -1.87
SCARNA20.4-201ENST00000516969 XGP55808 180 aa3.37□□□□□ -1.87
SCARNA20.4-201ENST00000516969 KRTAP10-2P60368 255 aa3.37□□□□□ -1.87
SCARNA20.4-201ENST00000516969 Q6ZQT0 140 aa3.37□□□□□ -1.87
SCARNA20.4-201ENST00000516969 DPH3Q96FX2 82 aa3.37□□□□□ -1.87
SCARNA20.4-201ENST00000516969 LAMTOR3Q9UHA4 124 aa3.37□□□□□ -1.87
SCARNA20.4-201ENST00000516969 SACSQ9NZJ4 4579 aa3.37□□□□□ -1.87
SCARNA20.4-201ENST00000516969 HYDINQ4G0P3 5121 aa3.36□□□□□ -1.87
SCARNA20.4-201ENST00000516969 DNAH8Q96JB1 4490 aa3.36□□□□□ -1.87
SCARNA20.4-201ENST00000516969 TRBV7-4A0A0J9YYF1 115 aa3.36□□□□□ -1.87
SCARNA20.4-201ENST00000516969 MT-ATP8P03928 68 aa3.36□□□□□ -1.87
SCARNA20.4-201ENST00000516969 PDE6GP18545 87 aa3.36□□□□□ -1.87
SCARNA20.4-201ENST00000516969 UBE2BP63146 152 aa3.36□□□□□ -1.87
SCARNA20.4-201ENST00000516969 GAGE2AQ6NT46 116 aa3.36□□□□□ -1.87
SCARNA20.4-201ENST00000516969 FAM19A1Q7Z5A9 133 aa3.36□□□□□ -1.87
SCARNA20.4-201ENST00000516969 KRTAP13-1Q8IUC0 172 aa3.36□□□□□ -1.87
SCARNA20.4-201ENST00000516969 ST20-AS1Q8NBB2 130 aa3.36□□□□□ -1.87
SCARNA20.4-201ENST00000516969 DNAH5Q8TE73 4624 aa3.35□□□□□ -1.87
SCARNA20.4-201ENST00000516969 LCE6AA0A183 80 aa3.35□□□□□ -1.87
SCARNA20.4-201ENST00000516969 A0A1B0GV72 72 aa3.35□□□□□ -1.87
SCARNA20.4-201ENST00000516969 BCE1O60756 84 aa3.35□□□□□ -1.87
SCARNA20.4-201ENST00000516969 PRLHP81277 87 aa3.35□□□□□ -1.87
SCARNA20.4-201ENST00000516969 DEFB105AQ8NG35 78 aa3.35□□□□□ -1.87
SCARNA20.4-201ENST00000516969 DSCR8Q96T75 97 aa3.35□□□□□ -1.87
SCARNA20.4-201ENST00000516969 SPRR1BP22528 89 aa3.34□□□□□ -1.87
SCARNA20.4-201ENST00000516969 C21orf62-AS1Q17RA5 79 aa3.34□□□□□ -1.87
SCARNA20.4-201ENST00000516969 Q6ZSA8 131 aa3.34□□□□□ -1.87
SCARNA20.4-201ENST00000516969 SMIM29Q86T20 159 aa3.34□□□□□ -1.87
SCARNA20.4-201ENST00000516969 LINC00643Q86TS7 51 aa3.34□□□□□ -1.87
SCARNA20.4-201ENST00000516969 LINC00846Q9NV44 126 aa3.34□□□□□ -1.87
SCARNA20.4-201ENST00000516969 FAM30AQ9NZY2 134 aa3.34□□□□□ -1.87
SCARNA20.4-201ENST00000516969 PKHD1P08F94 4074 aa3.34□□□□□ -1.88
SCARNA20.4-201ENST00000516969 IGLV8-61A0A075B6I0 122 aa3.33□□□□□ -1.88
SCARNA20.4-201ENST00000516969 SCGB1A1P11684 91 aa3.33□□□□□ -1.88
SCARNA20.4-201ENST00000516969 UBE2AP49459 152 aa3.33□□□□□ -1.88
SCARNA20.4-201ENST00000516969 KRTAP10-1P60331 282 aa3.33□□□□□ -1.88
SCARNA20.4-201ENST00000516969 PSORS1C2Q9UIG4 136 aa3.33□□□□□ -1.88
SCARNA20.4-201ENST00000516969 TRBV7-7A0A0K0K1E9 115 aa3.32□□□□□ -1.88
SCARNA20.4-201ENST00000516969 Q6Q795 121 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms