RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 SYCNQ0VAF6 134 aa6.31□□□□□ -1.4
MSH3-203ENST00000512531 Q6Q795 121 aa6.31□□□□□ -1.4
MSH3-203ENST00000512531 Q8N814 137 aa6.31□□□□□ -1.4
MSH3-203ENST00000512531 DIRC1Q969H9 104 aa6.31□□□□□ -1.4
MSH3-203ENST00000512531 UPK3BQ9BT76 320 aa6.31□□□□□ -1.4
MSH3-203ENST00000512531 C6orf48Q9UBA6 75 aa6.31□□□□□ -1.4
MSH3-203ENST00000512531 FAT2Q9NYQ8 4349 aa6.31□□□□□ -1.4
MSH3-203ENST00000512531 TRAV23DV6A0A075B6W5 121 aa6.3□□□□□ -1.4
MSH3-203ENST00000512531 M0R378 163 aa6.3□□□□□ -1.4
MSH3-203ENST00000512531 C9orf116Q5BN46 136 aaPredicted RBP6.3□□□□□ -1.4
MSH3-203ENST00000512531 TTC32Q5I0X7 151 aa6.3□□□□□ -1.4
MSH3-203ENST00000512531 C6orf223Q8N319 242 aa6.3□□□□□ -1.4
MSH3-203ENST00000512531 Q9HAA7 133 aa6.3□□□□□ -1.4
MSH3-203ENST00000512531 A0A087WYN8 130 aa6.29□□□□□ -1.4
MSH3-203ENST00000512531 hADV29S1A0JD25 119 aa6.29□□□□□ -1.4
MSH3-203ENST00000512531 IGLV6-57P01721 117 aa6.29□□□□□ -1.4
MSH3-203ENST00000512531 PDE6GP18545 87 aa6.29□□□□□ -1.4
MSH3-203ENST00000512531 HIGD2BQ4VC39 106 aa6.29□□□□□ -1.4
MSH3-203ENST00000512531 C6orf99Q4VX62 202 aa6.29□□□□□ -1.4
MSH3-203ENST00000512531 C10orf25Q5T742 122 aa6.29□□□□□ -1.4
MSH3-203ENST00000512531 LINC00643Q86TS7 51 aa6.29□□□□□ -1.4
MSH3-203ENST00000512531 NKAPP1Q8N9T2 125 aa6.29□□□□□ -1.4
MSH3-203ENST00000512531 FAM218AQ96MZ4 157 aa6.29□□□□□ -1.4
MSH3-203ENST00000512531 LINC00167Q96N53 147 aa6.29□□□□□ -1.4
MSH3-203ENST00000512531 IMUPQ9GZP8 106 aa6.29□□□□□ -1.4
MSH3-203ENST00000512531 DNAH2Q9P225 4427 aa6.29□□□□□ -1.4
MSH3-203ENST00000512531 DNAH11Q96DT5 4516 aa6.29□□□□□ -1.4
MSH3-203ENST00000512531 RPL18AQ02543 176 aaKnown RBP6.28□□□□□ -1.4
MSH3-203ENST00000512531 GAGE2AQ6NT46 116 aa6.28□□□□□ -1.4
MSH3-203ENST00000512531 UBE2DNLQ8IWF7 75 aa6.28□□□□□ -1.4
MSH3-203ENST00000512531 DYNC1H1Q14204 4646 aaKnown RBP6.27□□□□□ -1.41
MSH3-203ENST00000512531 TLX1NBP0CAT3 122 aa6.27□□□□□ -1.41
MSH3-203ENST00000512531 COX7BP24311 80 aa6.27□□□□□ -1.41
MSH3-203ENST00000512531 XGP55808 180 aa6.27□□□□□ -1.41
MSH3-203ENST00000512531 KRTAP19-4Q3LI73 84 aa6.27□□□□□ -1.41
MSH3-203ENST00000512531 C14orf177Q52M58 125 aa6.27□□□□□ -1.41
MSH3-203ENST00000512531 LINC00575Q6W349 94 aa6.27□□□□□ -1.41
MSH3-203ENST00000512531 MT-ATP8P03928 68 aa6.26□□□□□ -1.41
MSH3-203ENST00000512531 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.26□□□□□ -1.41
MSH3-203ENST00000512531 Q6ZRU5 148 aa6.26□□□□□ -1.41
MSH3-203ENST00000512531 C15orf56Q8N910 161 aa6.26□□□□□ -1.41
MSH3-203ENST00000512531 LINC00526Q96FQ7 95 aa6.26□□□□□ -1.41
MSH3-203ENST00000512531 LINC00588Q9Y4M8 146 aa6.26□□□□□ -1.41
MSH3-203ENST00000512531 ABCA13Q86UQ4 5058 aa6.26□□□□□ -1.41
MSH3-203ENST00000512531 RTL8CO15255 209 aa6.25□□□□□ -1.41
MSH3-203ENST00000512531 ZNF73O43830 326 aaPredicted RBP6.25□□□□□ -1.41
MSH3-203ENST00000512531 KRTAP26-1Q6PEX3 210 aa6.25□□□□□ -1.41
MSH3-203ENST00000512531 XAGE1AQ9HD64 81 aa6.25□□□□□ -1.41
MSH3-203ENST00000512531 TRBV10-3A0A0K0K1G6 114 aa6.24□□□□□ -1.41
MSH3-203ENST00000512531 PSCAO43653 123 aa6.24□□□□□ -1.41
MSH3-203ENST00000512531 PRR3P79522 188 aaKnown RBP6.24□□□□□ -1.41
MSH3-203ENST00000512531 OBSCN-AS1Q96MR7 158 aa6.24□□□□□ -1.41
MSH3-203ENST00000512531 DSCR8Q96T75 97 aa6.24□□□□□ -1.41
MSH3-203ENST00000512531 LAMTOR3Q9UHA4 124 aa6.24□□□□□ -1.41
MSH3-203ENST00000512531 PKD1P98161 4303 aa6.23□□□□□ -1.41
MSH3-203ENST00000512531 LOC107984640A0A0U1RRK4 108 aa6.23□□□□□ -1.41
MSH3-203ENST00000512531 VPREB1P12018 145 aa6.23□□□□□ -1.41
MSH3-203ENST00000512531 RBM3P98179 157 aaKnown RBP6.23□□□□□ -1.41
MSH3-203ENST00000512531 Q6ZR54 194 aa6.23□□□□□ -1.41
MSH3-203ENST00000512531 ANAPC13Q9BS18 74 aa6.23□□□□□ -1.41
MSH3-203ENST00000512531 TRBV7-7A0A0K0K1E9 115 aa6.22□□□□□ -1.41
MSH3-203ENST00000512531 CCKP06307 115 aa6.22□□□□□ -1.41
MSH3-203ENST00000512531 ELOF1P60002 83 aaKnown RBP6.22□□□□□ -1.41
MSH3-203ENST00000512531 ATP5EP2Q5VTU8 51 aa6.22□□□□□ -1.41
MSH3-203ENST00000512531 C14orf132Q9NPU4 83 aa6.22□□□□□ -1.41
MSH3-203ENST00000512531 CDK2AP2O75956 126 aa6.2□□□□□ -1.42
MSH3-203ENST00000512531 SLPIP03973 132 aa6.2□□□□□ -1.42
MSH3-203ENST00000512531 SDIM1Q6ZPB5 146 aa6.2□□□□□ -1.42
MSH3-203ENST00000512531 UBL5Q9BZL1 73 aa6.2□□□□□ -1.42
MSH3-203ENST00000512531 DHRS4-AS1Q9P1J3 65 aa6.2□□□□□ -1.42
MSH3-203ENST00000512531 Q6ZRP5 223 aa6.19□□□□□ -1.42
MSH3-203ENST00000512531 HSPG2P98160 4391 aa6.18□□□□□ -1.42
MSH3-203ENST00000512531 IGLV5-37A0A075B6J1 123 aa6.18□□□□□ -1.42
MSH3-203ENST00000512531 LOC110117498A0A087WWA1 95 aa6.18□□□□□ -1.42
MSH3-203ENST00000512531 M0R2N4 97 aa6.18□□□□□ -1.42
MSH3-203ENST00000512531 KRTAP10-2P60368 255 aa6.18□□□□□ -1.42
MSH3-203ENST00000512531 C1orf134Q5TEV5 83 aa6.18□□□□□ -1.42
MSH3-203ENST00000512531 Q6JHZ5 121 aa6.18□□□□□ -1.42
MSH3-203ENST00000512531 Q6ZQY7 126 aa6.18□□□□□ -1.42
MSH3-203ENST00000512531 KCNQ1DNQ9H478 68 aa6.18□□□□□ -1.42
MSH3-203ENST00000512531 ETDCA0A1B0GVM5 59 aa6.17□□□□□ -1.42
MSH3-203ENST00000512531 NDUFV3P56181 108 aaKnown RBP6.17□□□□□ -1.42
MSH3-203ENST00000512531 KRTAP4-5Q9BYR2 181 aa6.17□□□□□ -1.42
MSH3-203ENST00000512531 C22orf24Q9Y442 160 aa6.16□□□□□ -1.42
MSH3-203ENST00000512531 Q8N1X5 172 aa6.15□□□□□ -1.42
MSH3-203ENST00000512531 Q8NDZ9 215 aa6.15□□□□□ -1.42
MSH3-203ENST00000512531 LINC00474Q9P2X8 69 aa6.15□□□□□ -1.42
MSH3-203ENST00000512531 LRP1BQ9NZR2 4599 aa6.14□□□□□ -1.43
MSH3-203ENST00000512531 A0A1B0GW54 56 aa6.14□□□□□ -1.43
MSH3-203ENST00000512531 CNBPP62633 177 aaKnown RBP6.14□□□□□ -1.43
MSH3-203ENST00000512531 C9orf129Q5T035 196 aaKnown RBP6.14□□□□□ -1.43
MSH3-203ENST00000512531 MRPL55Q7Z7F7 128 aaKnown RBP6.14□□□□□ -1.43
MSH3-203ENST00000512531 C16orf90A8MZG2 172 aa6.13□□□□□ -1.43
MSH3-203ENST00000512531 ATOX1O00244 68 aa6.13□□□□□ -1.43
MSH3-203ENST00000512531 LCE3BQ5TA77 95 aa6.13□□□□□ -1.43
MSH3-203ENST00000512531 C7orf33Q8WU49 177 aa6.13□□□□□ -1.43
MSH3-203ENST00000512531 Q6ZQT0 140 aa6.12□□□□□ -1.43
MSH3-203ENST00000512531 IGLV1-50A0A075B6I6 118 aa6.11□□□□□ -1.43
MSH3-203ENST00000512531 NBDYA0A0U1RRE5 68 aa6.11□□□□□ -1.43
MSH3-203ENST00000512531 FAM236AA0A1B0GUQ0 79 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms