RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 CBLN2Q8IUK8 224 aa3.35□□□□□ -1.87
CLCN3-207ENST00000511092 LINC00337Q8N6G1 96 aa3.35□□□□□ -1.87
CLCN3-207ENST00000511092 GNB1LQ9BYB4 327 aa3.35□□□□□ -1.87
CLCN3-207ENST00000511092 CST9LQ9H4G1 147 aa3.35□□□□□ -1.87
CLCN3-207ENST00000511092 MT2AP02795 61 aa3.34□□□□□ -1.87
CLCN3-207ENST00000511092 RPL24P83731 157 aaKnown RBP3.34□□□□□ -1.87
CLCN3-207ENST00000511092 PMVKQ15126 192 aa3.34□□□□□ -1.87
CLCN3-207ENST00000511092 KIAA1644Q3SXP7 199 aa3.34□□□□□ -1.87
CLCN3-207ENST00000511092 KRTAP13-3Q3SY46 172 aa3.34□□□□□ -1.87
CLCN3-207ENST00000511092 LITAFQ99732 161 aa3.34□□□□□ -1.87
CLCN3-207ENST00000511092 SND1-IT1Q9HBX3 110 aa3.34□□□□□ -1.87
CLCN3-207ENST00000511092 LINC01546A6NGU7 62 aa3.33□□□□□ -1.88
CLCN3-207ENST00000511092 LINC01549A6NIU2 74 aa3.33□□□□□ -1.88
CLCN3-207ENST00000511092 H3BRM9 83 aa3.33□□□□□ -1.88
CLCN3-207ENST00000511092 MT1FP04733 61 aa3.33□□□□□ -1.88
CLCN3-207ENST00000511092 AKR1D1P51857 326 aa3.33□□□□□ -1.88
CLCN3-207ENST00000511092 KRTAP10-12P60413 245 aa3.33□□□□□ -1.88
CLCN3-207ENST00000511092 COX17Q14061 63 aa3.33□□□□□ -1.88
CLCN3-207ENST00000511092 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
CLCN3-207ENST00000511092 Q8NDZ9 215 aa3.33□□□□□ -1.88
CLCN3-207ENST00000511092 SPRR4Q96PI1 79 aa3.33□□□□□ -1.88
CLCN3-207ENST00000511092 HIGD2AQ9BW72 106 aa3.33□□□□□ -1.88
CLCN3-207ENST00000511092 ERG28Q9UKR5 140 aa3.33□□□□□ -1.88
CLCN3-207ENST00000511092 IGLC3P0DOY3 106 aa3.32□□□□□ -1.88
CLCN3-207ENST00000511092 S100A2P29034 98 aa3.32□□□□□ -1.88
CLCN3-207ENST00000511092 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
CLCN3-207ENST00000511092 DAND5Q8N907 189 aa3.32□□□□□ -1.88
CLCN3-207ENST00000511092 Q8NBF4 154 aa3.32□□□□□ -1.88
CLCN3-207ENST00000511092 COLCA2A8K830 154 aa3.31□□□□□ -1.88
CLCN3-207ENST00000511092 SPINK1P00995 79 aa3.31□□□□□ -1.88
CLCN3-207ENST00000511092 NDUFA6P56556 154 aa3.31□□□□□ -1.88
CLCN3-207ENST00000511092 ZNF625Q96I27 306 aaPredicted RBP3.31□□□□□ -1.88
CLCN3-207ENST00000511092 ZNF706Q9Y5V0 76 aaPredicted RBP3.31□□□□□ -1.88
CLCN3-207ENST00000511092 ZNF22P17026 224 aaPredicted RBP3.3□□□□□ -1.88
CLCN3-207ENST00000511092 COX19Q49B96 90 aa3.3□□□□□ -1.88
CLCN3-207ENST00000511092 TRAPPC1Q9Y5R8 145 aa3.3□□□□□ -1.88
CLCN3-207ENST00000511092 TRAV9-1A0A075B6T8 112 aa3.29□□□□□ -1.88
CLCN3-207ENST00000511092 LGALS3P17931 250 aaKnown RBP3.29□□□□□ -1.88
CLCN3-207ENST00000511092 FABP9Q0Z7S8 132 aa3.29□□□□□ -1.88
CLCN3-207ENST00000511092 SFTA2Q6UW10 78 aa3.29□□□□□ -1.88
CLCN3-207ENST00000511092 FA2HQ7L5A8 372 aa3.29□□□□□ -1.88
CLCN3-207ENST00000511092 SMCR5Q8TEV8 140 aa3.29□□□□□ -1.88
CLCN3-207ENST00000511092 A0A096LNJ9 63 aa3.28□□□□□ -1.88
CLCN3-207ENST00000511092 LOC105371267A0A1B0GV96 52 aa3.28□□□□□ -1.88
CLCN3-207ENST00000511092 C11orf86A6NJI1 115 aa3.28□□□□□ -1.88
CLCN3-207ENST00000511092 SPRR1AP35321 89 aa3.28□□□□□ -1.88
CLCN3-207ENST00000511092 LINC00158P58513 81 aa3.28□□□□□ -1.88
CLCN3-207ENST00000511092 RPS29P62273 56 aaKnown RBP3.28□□□□□ -1.88
CLCN3-207ENST00000511092 SNRPEP62304 92 aaKnown RBP3.28□□□□□ -1.88
CLCN3-207ENST00000511092 LINC00483Q53H64 154 aa3.28□□□□□ -1.88
CLCN3-207ENST00000511092 BAGE3Q86Y29 109 aa3.28□□□□□ -1.88
CLCN3-207ENST00000511092 KCNQ1DNQ9H478 68 aa3.28□□□□□ -1.88
CLCN3-207ENST00000511092 NDUFA12Q9UI09 145 aa3.28□□□□□ -1.88
CLCN3-207ENST00000511092 A0A0U1RRA0 63 aa3.27□□□□□ -1.89
CLCN3-207ENST00000511092 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
CLCN3-207ENST00000511092 TRGC2P03986 189 aa3.27□□□□□ -1.89
CLCN3-207ENST00000511092 SPRR2DP22532 72 aa3.27□□□□□ -1.89
CLCN3-207ENST00000511092 TMEM170BQ5T4T1 132 aa3.27□□□□□ -1.89
CLCN3-207ENST00000511092 GAGE2AQ6NT46 116 aa3.27□□□□□ -1.89
CLCN3-207ENST00000511092 SSBP3-AS1Q7Z2R9 100 aa3.27□□□□□ -1.89
CLCN3-207ENST00000511092 Q8N377 158 aa3.27□□□□□ -1.89
CLCN3-207ENST00000511092 FAM19A2Q8N3H0 131 aa3.27□□□□□ -1.89
CLCN3-207ENST00000511092 IGLV9-49A0A0B4J1Y8 123 aa3.26□□□□□ -1.89
CLCN3-207ENST00000511092 ETDCA0A1B0GVM5 59 aa3.26□□□□□ -1.89
CLCN3-207ENST00000511092 SLC25A20O43772 301 aa3.26□□□□□ -1.89
CLCN3-207ENST00000511092 HBDP02042 147 aa3.26□□□□□ -1.89
CLCN3-207ENST00000511092 LINC00614P0C842 121 aa3.26□□□□□ -1.89
CLCN3-207ENST00000511092 S100A12P80511 92 aa3.26□□□□□ -1.89
CLCN3-207ENST00000511092 COX6B2Q6YFQ2 88 aa3.26□□□□□ -1.89
CLCN3-207ENST00000511092 BOD1L2Q8IYS8 172 aa3.26□□□□□ -1.89
CLCN3-207ENST00000511092 AHNAKQ09666 5890 aaKnown RBP3.25□□□□□ -1.89
CLCN3-207ENST00000511092 TRBV10-3A0A0K0K1G6 114 aa3.25□□□□□ -1.89
CLCN3-207ENST00000511092 TMEM223A0PJW6 202 aa3.25□□□□□ -1.89
CLCN3-207ENST00000511092 NCR3O14931 201 aa3.25□□□□□ -1.89
CLCN3-207ENST00000511092 ERC2-IT1O76042 136 aa3.25□□□□□ -1.89
CLCN3-207ENST00000511092 SMIM13P0DJ93 91 aa3.25□□□□□ -1.89
CLCN3-207ENST00000511092 MOBPQ13875 183 aa3.25□□□□□ -1.89
CLCN3-207ENST00000511092 PMCHL1Q16048 86 aa3.25□□□□□ -1.89
CLCN3-207ENST00000511092 NOTCH2NLQ7Z3S9 236 aa3.25□□□□□ -1.89
CLCN3-207ENST00000511092 C5orf52A6NGY3 159 aa3.24□□□□□ -1.89
CLCN3-207ENST00000511092 PCP4L1A6NKN8 68 aa3.24□□□□□ -1.89
CLCN3-207ENST00000511092 SCGB1D1O95968 90 aa3.24□□□□□ -1.89
CLCN3-207ENST00000511092 MEIG1Q5JSS6 88 aa3.24□□□□□ -1.89
CLCN3-207ENST00000511092 Q75L30 129 aa3.24□□□□□ -1.89
CLCN3-207ENST00000511092 MIR7-3HGQ8N6C7 128 aa3.24□□□□□ -1.89
CLCN3-207ENST00000511092 C18orf32Q8TCD1 76 aa3.24□□□□□ -1.89
CLCN3-207ENST00000511092 CHTOPQ9Y3Y2 248 aaKnown RBP3.24□□□□□ -1.89
CLCN3-207ENST00000511092 LINC00587B1AMM8 73 aa3.23□□□□□ -1.89
CLCN3-207ENST00000511092 FABP4P15090 132 aa3.23□□□□□ -1.89
CLCN3-207ENST00000511092 C12orf57Q99622 126 aa3.23□□□□□ -1.89
CLCN3-207ENST00000511092 Q9BRP9 147 aa3.23□□□□□ -1.89
CLCN3-207ENST00000511092 TRAV12-1A0A0B4J245 112 aa3.22□□□□□ -1.89
CLCN3-207ENST00000511092 LOC107984156A0A0G2JMH3 177 aa3.22□□□□□ -1.89
CLCN3-207ENST00000511092 HIST1H2BKO60814 126 aa3.22□□□□□ -1.89
CLCN3-207ENST00000511092 HIST1H2BJP06899 126 aa3.22□□□□□ -1.89
CLCN3-207ENST00000511092 HIST1H2BOP23527 126 aa3.22□□□□□ -1.89
CLCN3-207ENST00000511092 HIST1H2BBP33778 126 aa3.22□□□□□ -1.89
CLCN3-207ENST00000511092 HIST1H2BDP58876 126 aa3.22□□□□□ -1.89
CLCN3-207ENST00000511092 HIST1H2BCP62807 126 aa3.22□□□□□ -1.89
CLCN3-207ENST00000511092 HERV-K104P63124 156 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms