RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 PRYO14603 147 aa6.02□□□□□ -1.45
PDGFRA-208ENST00000509490 FN1P02751 2386 aaKnown RBP6.02□□□□□ -1.45
PDGFRA-208ENST00000509490 UNC79Q9P2D8 2635 aa6.02□□□□□ -1.45
PDGFRA-208ENST00000509490 GCN1Q92616 2671 aaKnown RBP6.02□□□□□ -1.45
PDGFRA-208ENST00000509490 IGKV4-1P06312 121 aa6.02□□□□□ -1.45
PDGFRA-208ENST00000509490 HIVEP2P31629 2446 aa6.02□□□□□ -1.45
PDGFRA-208ENST00000509490 ACANP16112 2415 aa6.01□□□□□ -1.45
PDGFRA-208ENST00000509490 Q6ZTC4 211 aa6.01□□□□□ -1.45
PDGFRA-208ENST00000509490 KMT2BQ9UMN6 2715 aaPredicted RBP6.01□□□□□ -1.45
PDGFRA-208ENST00000509490 Q8N377 158 aa6□□□□□ -1.45
PDGFRA-208ENST00000509490 MTORP42345 2549 aa6□□□□□ -1.45
PDGFRA-208ENST00000509490 LCE6AA0A183 80 aa6□□□□□ -1.45
PDGFRA-208ENST00000509490 C7orf33Q8WU49 177 aa6□□□□□ -1.45
PDGFRA-208ENST00000509490 C4orf26Q17RF5 130 aa6□□□□□ -1.45
PDGFRA-208ENST00000509490 OCR1Q9BZK8 76 aa6□□□□□ -1.45
PDGFRA-208ENST00000509490 DNAH1Q9P2D7 4330 aa5.99□□□□□ -1.45
PDGFRA-208ENST00000509490 KRTAP10-11P60412 298 aa5.99□□□□□ -1.45
PDGFRA-208ENST00000509490 Q6ZRX8 168 aa5.99□□□□□ -1.45
PDGFRA-208ENST00000509490 NREPQ16612 68 aa5.99□□□□□ -1.45
PDGFRA-208ENST00000509490 IGLV1-50A0A075B6I6 118 aa5.98□□□□□ -1.45
PDGFRA-208ENST00000509490 BPY2O14599 106 aa5.98□□□□□ -1.45
PDGFRA-208ENST00000509490 SPRR4Q96PI1 79 aa5.98□□□□□ -1.45
PDGFRA-208ENST00000509490 ITPR2Q14571 2701 aa5.98□□□□□ -1.45
PDGFRA-208ENST00000509490 VWFP04275 2813 aa5.98□□□□□ -1.45
PDGFRA-208ENST00000509490 SETD2Q9BYW2 2564 aaPredicted RBP5.98□□□□□ -1.45
PDGFRA-208ENST00000509490 LINC00336Q6ZUF6 198 aa5.98□□□□□ -1.45
PDGFRA-208ENST00000509490 TM2D3Q9BRN9 247 aa5.98□□□□□ -1.45
PDGFRA-208ENST00000509490 DNAH3Q8TD57 4116 aa5.98□□□□□ -1.45
PDGFRA-208ENST00000509490 NKAPP1Q8N9T2 125 aa5.97□□□□□ -1.45
PDGFRA-208ENST00000509490 A0A0U1RQV1 116 aa5.97□□□□□ -1.45
PDGFRA-208ENST00000509490 TMEM254Q8TBM7 123 aa5.96□□□□□ -1.46
PDGFRA-208ENST00000509490 RMI2Q96E14 147 aa5.96□□□□□ -1.46
PDGFRA-208ENST00000509490 PKIGQ9Y2B9 76 aa5.96□□□□□ -1.46
PDGFRA-208ENST00000509490 NBEAL2Q6ZNJ1 2754 aa5.96□□□□□ -1.46
PDGFRA-208ENST00000509490 DEFB131BA0A096LNP1 70 aa5.95□□□□□ -1.46
PDGFRA-208ENST00000509490 IGKV2D-24A0A075B6R9 120 aa5.95□□□□□ -1.46
PDGFRA-208ENST00000509490 SMIM26A0A096LP01 95 aa5.95□□□□□ -1.46
PDGFRA-208ENST00000509490 Q8NBF4 154 aa5.95□□□□□ -1.46
PDGFRA-208ENST00000509490 Q9BRP9 147 aa5.95□□□□□ -1.46
PDGFRA-208ENST00000509490 NSD1Q96L73 2696 aaPredicted RBP5.95□□□□□ -1.46
PDGFRA-208ENST00000509490 F8WEM9 126 aa5.94□□□□□ -1.46
PDGFRA-208ENST00000509490 KRTAP7-1Q8IUC3 87 aa5.94□□□□□ -1.46
PDGFRA-208ENST00000509490 A0A0A0MQY5 61 aa5.94□□□□□ -1.46
PDGFRA-208ENST00000509490 A0A1W2PNM2 257 aa5.94□□□□□ -1.46
PDGFRA-208ENST00000509490 C11orf45Q8TAV5 145 aa5.94□□□□□ -1.46
PDGFRA-208ENST00000509490 HIVEP1P15822 2718 aa5.94□□□□□ -1.46
PDGFRA-208ENST00000509490 FUSP35637 526 aaKnown RBP eCLIP5.94□□□□□ -1.46
PDGFRA-208ENST00000509490 NOTCH2Q04721 2471 aa5.93□□□□□ -1.46
PDGFRA-208ENST00000509490 SCXQ7RTU7 201 aa5.93□□□□□ -1.46
PDGFRA-208ENST00000509490 IGLV8-61A0A075B6I0 122 aa5.92□□□□□ -1.46
PDGFRA-208ENST00000509490 SNURFQ9Y675 71 aa5.92□□□□□ -1.46
PDGFRA-208ENST00000509490 OTOGQ6ZRI0 2925 aa5.92□□□□□ -1.46
PDGFRA-208ENST00000509490 CMYA5Q8N3K9 4069 aa5.91□□□□□ -1.46
PDGFRA-208ENST00000509490 C1orf137Q5JT78 98 aa5.91□□□□□ -1.46
PDGFRA-208ENST00000509490 LINC00588Q9Y4M8 146 aa5.91□□□□□ -1.46
PDGFRA-208ENST00000509490 TENM1Q9UKZ4 2725 aa5.91□□□□□ -1.46
PDGFRA-208ENST00000509490 ETDCA0A1B0GVM5 59 aa5.9□□□□□ -1.46
PDGFRA-208ENST00000509490 MRPL55Q7Z7F7 128 aaKnown RBP5.9□□□□□ -1.47
PDGFRA-208ENST00000509490 SMIM29Q86T20 159 aa5.9□□□□□ -1.47
PDGFRA-208ENST00000509490 ZCCHC13Q8WW36 166 aaKnown RBP5.9□□□□□ -1.47
PDGFRA-208ENST00000509490 FP248Q71RG6 208 aaPredicted RBP5.89□□□□□ -1.47
PDGFRA-208ENST00000509490 FASNP49327 2511 aaKnown RBP5.89□□□□□ -1.47
PDGFRA-208ENST00000509490 RPL37AP8A6NKH3 93 aa5.88□□□□□ -1.47
PDGFRA-208ENST00000509490 DSCR10P59022 87 aa5.88□□□□□ -1.47
PDGFRA-208ENST00000509490 PRR26Q8N8Z3 221 aa5.88□□□□□ -1.47
PDGFRA-208ENST00000509490 TEP1Q99973 2627 aaKnown RBP5.88□□□□□ -1.47
PDGFRA-208ENST00000509490 Q8N9L7 120 aa5.88□□□□□ -1.47
PDGFRA-208ENST00000509490 HELZ2Q9BYK8 2649 aaKnown RBP5.87□□□□□ -1.47
PDGFRA-208ENST00000509490 C3orf84H3BNL1 204 aa5.87□□□□□ -1.47
PDGFRA-208ENST00000509490 CNBPP62633 177 aaKnown RBP5.87□□□□□ -1.47
PDGFRA-208ENST00000509490 REG3GQ6UW15 175 aa5.87□□□□□ -1.47
PDGFRA-208ENST00000509490 HRCT1Q6UXD1 115 aa5.87□□□□□ -1.47
PDGFRA-208ENST00000509490 FAM168BA1KXE4 195 aa5.86□□□□□ -1.47
PDGFRA-208ENST00000509490 ST20-AS1Q8NBB2 130 aa5.86□□□□□ -1.47
PDGFRA-208ENST00000509490 DEFB105AQ8NG35 78 aa5.86□□□□□ -1.47
PDGFRA-208ENST00000509490 H0Y9J4 135 aa5.85□□□□□ -1.47
PDGFRA-208ENST00000509490 SPRR1BP22528 89 aa5.85□□□□□ -1.47
PDGFRA-208ENST00000509490 CASC10Q5T4H9 136 aa5.85□□□□□ -1.47
PDGFRA-208ENST00000509490 KRTAP24-1Q3LI83 254 aa5.84□□□□□ -1.47
PDGFRA-208ENST00000509490 C16orf90A8MZG2 172 aa5.84□□□□□ -1.48
PDGFRA-208ENST00000509490 LINC00476Q8WZB0 136 aa5.83□□□□□ -1.48
PDGFRA-208ENST00000509490 ANK2Q01484 3957 aa5.83□□□□□ -1.48
PDGFRA-208ENST00000509490 TRRAPQ9Y4A5 3859 aa5.83□□□□□ -1.48
PDGFRA-208ENST00000509490 CYP4F30PQ9H0H9 118 aa5.82□□□□□ -1.48
PDGFRA-208ENST00000509490 PRO0628Q9UI54 55 aa5.82□□□□□ -1.48
PDGFRA-208ENST00000509490 LCE2CQ5TA81 110 aa5.82□□□□□ -1.48
PDGFRA-208ENST00000509490 HIGD2AQ9BW72 106 aa5.82□□□□□ -1.48
PDGFRA-208ENST00000509490 HCG22E2RYF7 251 aa5.81□□□□□ -1.48
PDGFRA-208ENST00000509490 IGFL1Q6UW32 110 aa5.81□□□□□ -1.48
PDGFRA-208ENST00000509490 K7EQZ3 153 aa5.81□□□□□ -1.48
PDGFRA-208ENST00000509490 UBE2BP63146 152 aa5.8□□□□□ -1.48
PDGFRA-208ENST00000509490 C1orf195Q5TG92 126 aa5.8□□□□□ -1.48
PDGFRA-208ENST00000509490 hDV103S1A0JD37 113 aa5.8□□□□□ -1.48
PDGFRA-208ENST00000509490 ATRQ13535 2644 aa5.8□□□□□ -1.48
PDGFRA-208ENST00000509490 DYNC2H1Q8NCM8 4307 aaKnown RBP5.8□□□□□ -1.48
PDGFRA-208ENST00000509490 HUWE1Q7Z6Z7 4374 aaKnown RBP5.79□□□□□ -1.48
PDGFRA-208ENST00000509490 KRTAP29-1A8MX34 341 aaPredicted RBP5.79□□□□□ -1.48
PDGFRA-208ENST00000509490 H3BPC8 53 aa5.79□□□□□ -1.48
PDGFRA-208ENST00000509490 C14orf177Q52M58 125 aa5.78□□□□□ -1.48
PDGFRA-208ENST00000509490 FAM30AQ9NZY2 134 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms