RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 HERV-K104P63124 156 aa8.81□□□□□ -1
CXCL1-202ENST00000509101 BOD1L2Q8IYS8 172 aa8.81□□□□□ -1
CXCL1-202ENST00000509101 KCNQ1DNQ9H478 68 aa8.81□□□□□ -1
CXCL1-202ENST00000509101 MYMXA0A1B0GTQ4 84 aa8.8□□□□□ -1
CXCL1-202ENST00000509101 C3orf79P0CE67 100 aa8.8□□□□□ -1
CXCL1-202ENST00000509101 CFC1BP0CG36 223 aa8.8□□□□□ -1
CXCL1-202ENST00000509101 LINC01545Q5VT33 79 aa8.8□□□□□ -1
CXCL1-202ENST00000509101 SSBP3-AS1Q7Z2R9 100 aa8.8□□□□□ -1
CXCL1-202ENST00000509101 MIR7-3HGQ8N6C7 128 aa8.8□□□□□ -1
CXCL1-202ENST00000509101 HERVK_113P61574 105 aa8.79□□□□□ -1
CXCL1-202ENST00000509101 TRBV10-3A0A0K0K1G6 114 aa8.78□□□□□ -1
CXCL1-202ENST00000509101 ERC2-IT1O76042 136 aa8.78□□□□□ -1
CXCL1-202ENST00000509101 PET117Q6UWS5 81 aa8.78□□□□□ -1
CXCL1-202ENST00000509101 LGALS3P17931 250 aaKnown RBP8.77□□□□□ -1.01
CXCL1-202ENST00000509101 B5MCH6 92 aa8.76□□□□□ -1.01
CXCL1-202ENST00000509101 E9PLD3 99 aa8.76□□□□□ -1.01
CXCL1-202ENST00000509101 KRTDAPP60985 99 aa8.76□□□□□ -1.01
CXCL1-202ENST00000509101 NMUP48645 174 aa8.75□□□□□ -1.01
CXCL1-202ENST00000509101 PCOTHQ58A44 107 aa8.75□□□□□ -1.01
CXCL1-202ENST00000509101 C9orf153Q5TBE3 101 aa8.75□□□□□ -1.01
CXCL1-202ENST00000509101 IGLV8-61A0A075B6I0 122 aa8.74□□□□□ -1.01
CXCL1-202ENST00000509101 LINC00587B1AMM8 73 aa8.74□□□□□ -1.01
CXCL1-202ENST00000509101 LORP23490 312 aaPredicted RBP8.74□□□□□ -1.01
CXCL1-202ENST00000509101 A0A0J9YXY3 114 aa8.73□□□□□ -1.01
CXCL1-202ENST00000509101 KRTAP10-6P60371 365 aaPredicted RBP8.73□□□□□ -1.01
CXCL1-202ENST00000509101 S100A12P80511 92 aa8.73□□□□□ -1.01
CXCL1-202ENST00000509101 Q9BRP9 147 aa8.73□□□□□ -1.01
CXCL1-202ENST00000509101 ADAMTSL4-AS1Q5T5F5 129 aa8.72□□□□□ -1.01
CXCL1-202ENST00000509101 TTTY13Q9BZ97 58 aa8.72□□□□□ -1.01
CXCL1-202ENST00000509101 LOC107984156A0A0G2JMH3 177 aa8.71□□□□□ -1.02
CXCL1-202ENST00000509101 EIF4EBP3O60516 100 aaPredicted RBP8.71□□□□□ -1.02
CXCL1-202ENST00000509101 ARL17AQ8IVW1 177 aa8.71□□□□□ -1.02
CXCL1-202ENST00000509101 SOSTDC1Q6X4U4 206 aa8.7□□□□□ -1.02
CXCL1-202ENST00000509101 Q6ZRX8 168 aa8.7□□□□□ -1.02
CXCL1-202ENST00000509101 HIST3H2BBQ8N257 126 aa8.7□□□□□ -1.02
CXCL1-202ENST00000509101 C9orf92A6NGG3 77 aa8.69□□□□□ -1.02
CXCL1-202ENST00000509101 DDTP30046 118 aa8.69□□□□□ -1.02
CXCL1-202ENST00000509101 NPC2P61916 151 aa8.69□□□□□ -1.02
CXCL1-202ENST00000509101 ATOH7Q8N100 152 aa8.69□□□□□ -1.02
CXCL1-202ENST00000509101 ANKRD39Q53RE8 183 aa8.68□□□□□ -1.02
CXCL1-202ENST00000509101 LITAFQ99732 161 aa8.68□□□□□ -1.02
CXCL1-202ENST00000509101 HIST1H2BLQ99880 126 aa8.67□□□□□ -1.02
CXCL1-202ENST00000509101 ZNF815PA8K554 130 aa8.66□□□□□ -1.02
CXCL1-202ENST00000509101 M0R2T5 61 aa8.66□□□□□ -1.02
CXCL1-202ENST00000509101 C20orf202A1L168 122 aa8.65□□□□□ -1.02
CXCL1-202ENST00000509101 FLGP20930 4061 aaPredicted RBP8.65□□□□□ -1.03
CXCL1-202ENST00000509101 MIEN1Q9BRT3 115 aa8.64□□□□□ -1.03
CXCL1-202ENST00000509101 TRBV10-2A0A0K0K1G8 114 aa8.63□□□□□ -1.03
CXCL1-202ENST00000509101 S100A2P29034 98 aa8.63□□□□□ -1.03
CXCL1-202ENST00000509101 HRCT1Q6UXD1 115 aa8.63□□□□□ -1.03
CXCL1-202ENST00000509101 ST20-AS1Q8NBB2 130 aa8.63□□□□□ -1.03
CXCL1-202ENST00000509101 LIMD2Q9BT23 127 aa8.63□□□□□ -1.03
CXCL1-202ENST00000509101 TIMM17BO60830 172 aa8.62□□□□□ -1.03
CXCL1-202ENST00000509101 NDUFC2O95298 119 aa8.62□□□□□ -1.03
CXCL1-202ENST00000509101 SNRPEP62304 92 aaKnown RBP8.62□□□□□ -1.03
CXCL1-202ENST00000509101 LINC00308Q8TCZ7 52 aa8.62□□□□□ -1.03
CXCL1-202ENST00000509101 SPANXB1Q9NS25 103 aaPredicted RBP8.62□□□□□ -1.03
CXCL1-202ENST00000509101 S100A6P06703 90 aa8.61□□□□□ -1.03
CXCL1-202ENST00000509101 JOSD1Q15040 202 aaPredicted RBP8.61□□□□□ -1.03
CXCL1-202ENST00000509101 PCP2Q8IVA1 136 aa8.61□□□□□ -1.03
CXCL1-202ENST00000509101 TRAV23DV6A0A075B6W5 121 aa8.6□□□□□ -1.03
CXCL1-202ENST00000509101 S100A7L2Q5SY68 101 aa8.6□□□□□ -1.03
CXCL1-202ENST00000509101 IGLV6-57P01721 117 aa8.59□□□□□ -1.03
CXCL1-202ENST00000509101 C5orf52A6NGY3 159 aa8.58□□□□□ -1.04
CXCL1-202ENST00000509101 COX6B2Q6YFQ2 88 aa8.58□□□□□ -1.04
CXCL1-202ENST00000509101 ZNF73O43830 326 aaPredicted RBP8.56□□□□□ -1.04
CXCL1-202ENST00000509101 SCGB1D4Q6XE38 83 aa8.56□□□□□ -1.04
CXCL1-202ENST00000509101 SPANXCQ9NY87 97 aa8.56□□□□□ -1.04
CXCL1-202ENST00000509101 AKR1D1P51857 326 aa8.55□□□□□ -1.04
CXCL1-202ENST00000509101 SPANXDQ9BXN6 97 aa8.55□□□□□ -1.04
CXCL1-202ENST00000509101 KRTAP9-7A8MTY7 169 aa8.53□□□□□ -1.04
CXCL1-202ENST00000509101 SPRR1BP22528 89 aa8.52□□□□□ -1.05
CXCL1-202ENST00000509101 OR13C6PQ8NH95 151 aa8.52□□□□□ -1.05
CXCL1-202ENST00000509101 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.51□□□□□ -1.05
CXCL1-202ENST00000509101 SCGB1D1O95968 90 aa8.51□□□□□ -1.05
CXCL1-202ENST00000509101 SLC25A34Q6PIV7 304 aa8.51□□□□□ -1.05
CXCL1-202ENST00000509101 MUSTN1Q8IVN3 82 aa8.51□□□□□ -1.05
CXCL1-202ENST00000509101 HINT1P49773 126 aaPredicted RBP8.5□□□□□ -1.05
CXCL1-202ENST00000509101 RPL37P61927 97 aaKnown RBP8.5□□□□□ -1.05
CXCL1-202ENST00000509101 LAMTOR3Q9UHA4 124 aa8.5□□□□□ -1.05
CXCL1-202ENST00000509101 HSBP1L1C9JCN9 74 aa8.49□□□□□ -1.05
CXCL1-202ENST00000509101 H7C2G1 150 aa8.49□□□□□ -1.05
CXCL1-202ENST00000509101 IFITM1P13164 125 aa8.48□□□□□ -1.05
CXCL1-202ENST00000509101 LINC00518Q8N0U6 118 aa8.48□□□□□ -1.05
CXCL1-202ENST00000509101 Q1RN00 199 aa8.47□□□□□ -1.05
CXCL1-202ENST00000509101 Q6ZVH6 145 aa8.47□□□□□ -1.05
CXCL1-202ENST00000509101 CD164Q04900 197 aa8.46□□□□□ -1.06
CXCL1-202ENST00000509101 DHRS4-AS1Q9P1J3 65 aa8.46□□□□□ -1.06
CXCL1-202ENST00000509101 C1orf195Q5TG92 126 aa8.45□□□□□ -1.06
CXCL1-202ENST00000509101 CBY1Q9Y3M2 126 aa8.45□□□□□ -1.06
CXCL1-202ENST00000509101 C6orf99Q4VX62 202 aa8.44□□□□□ -1.06
CXCL1-202ENST00000509101 PRO1933Q9H354 126 aa8.44□□□□□ -1.06
CXCL1-202ENST00000509101 COPS9Q8WXC6 57 aa8.43□□□□□ -1.06
CXCL1-202ENST00000509101 SSPOA2VEC9 5147 aa8.43□□□□□ -1.06
CXCL1-202ENST00000509101 A6NDN8 102 aa8.42□□□□□ -1.06
CXCL1-202ENST00000509101 DEFB105AQ8NG35 78 aa8.42□□□□□ -1.06
CXCL1-202ENST00000509101 COX8AP10176 69 aa8.41□□□□□ -1.06
CXCL1-202ENST00000509101 ELOF1P60002 83 aaKnown RBP8.41□□□□□ -1.06
CXCL1-202ENST00000509101 TAL2Q16559 108 aa8.41□□□□□ -1.06
CXCL1-202ENST00000509101 Q5XG85 94 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms