RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 H3BQ85 93 aa7.12□□□□□ -1.27
LIN54-207ENST00000508171 FAM168BA1KXE4 195 aa7.11□□□□□ -1.27
LIN54-207ENST00000508171 GHRHP01286 108 aa7.11□□□□□ -1.27
LIN54-207ENST00000508171 PDE6GP18545 87 aa7.11□□□□□ -1.27
LIN54-207ENST00000508171 NKAPP1Q8N9T2 125 aa7.11□□□□□ -1.27
LIN54-207ENST00000508171 C7orf33Q8WU49 177 aa7.11□□□□□ -1.27
LIN54-207ENST00000508171 COL7A1Q02388 2944 aa7.1□□□□□ -1.27
LIN54-207ENST00000508171 RPL37AP8A6NKH3 93 aa7.1□□□□□ -1.27
LIN54-207ENST00000508171 TRAV10A0A0B4J240 114 aa7.09□□□□□ -1.27
LIN54-207ENST00000508171 F8WDY8 70 aa7.09□□□□□ -1.27
LIN54-207ENST00000508171 KCNQ1DNQ9H478 68 aa7.09□□□□□ -1.27
LIN54-207ENST00000508171 DEFB105AQ8NG35 78 aa7.09□□□□□ -1.27
LIN54-207ENST00000508171 SCXQ7RTU7 201 aa7.08□□□□□ -1.28
LIN54-207ENST00000508171 HUWE1Q7Z6Z7 4374 aaKnown RBP7.08□□□□□ -1.28
LIN54-207ENST00000508171 DNAH1Q9P2D7 4330 aa7.07□□□□□ -1.28
LIN54-207ENST00000508171 KRTAP7-1Q8IUC3 87 aa7.07□□□□□ -1.28
LIN54-207ENST00000508171 MGAM2Q2M2H8 2515 aa7.06□□□□□ -1.28
LIN54-207ENST00000508171 K7EIL1 84 aa7.06□□□□□ -1.28
LIN54-207ENST00000508171 TLX1NBP0CAT3 122 aa7.06□□□□□ -1.28
LIN54-207ENST00000508171 TM2D3Q9BRN9 247 aa7.06□□□□□ -1.28
LIN54-207ENST00000508171 Q8N377 158 aa7.06□□□□□ -1.28
LIN54-207ENST00000508171 LOC107984640A0A0U1RRK4 108 aa7.05□□□□□ -1.28
LIN54-207ENST00000508171 CXCL6P80162 114 aa7.05□□□□□ -1.28
LIN54-207ENST00000508171 Q9BRP9 147 aa7.04□□□□□ -1.28
LIN54-207ENST00000508171 IGLV1-50A0A075B6I6 118 aa7.04□□□□□ -1.28
LIN54-207ENST00000508171 KRTAP4-16G5E9R7 235 aaPredicted RBP7.04□□□□□ -1.28
LIN54-207ENST00000508171 C5orf47Q569G3 176 aa7.04□□□□□ -1.28
LIN54-207ENST00000508171 STAB2Q8WWQ8 2551 aa7.03□□□□□ -1.28
LIN54-207ENST00000508171 DNAH10Q8IVF4 4471 aa7.03□□□□□ -1.28
LIN54-207ENST00000508171 PLA2G2DQ9UNK4 145 aa7.03□□□□□ -1.28
LIN54-207ENST00000508171 TENM2Q9NT68 2774 aa7.03□□□□□ -1.28
LIN54-207ENST00000508171 Q6ZRX8 168 aa7.03□□□□□ -1.28
LIN54-207ENST00000508171 FAM19A5Q7Z5A7 132 aaPredicted RBP7.03□□□□□ -1.28
LIN54-207ENST00000508171 C3orf84H3BNL1 204 aa7.02□□□□□ -1.29
LIN54-207ENST00000508171 C20orf197Q8N268 126 aa7.02□□□□□ -1.29
LIN54-207ENST00000508171 Q8N9L7 120 aa7.02□□□□□ -1.29
LIN54-207ENST00000508171 ST20-AS1Q8NBB2 130 aa7.01□□□□□ -1.29
LIN54-207ENST00000508171 CSMD3Q7Z407 3707 aa7.01□□□□□ -1.29
LIN54-207ENST00000508171 IGLV5-37A0A075B6J1 123 aa7□□□□□ -1.29
LIN54-207ENST00000508171 SPRR1AP35321 89 aa7□□□□□ -1.29
LIN54-207ENST00000508171 ETDCA0A1B0GVM5 59 aa7□□□□□ -1.29
LIN54-207ENST00000508171 ERC2-IT1O76042 136 aa7□□□□□ -1.29
LIN54-207ENST00000508171 RMI2Q96E14 147 aa7□□□□□ -1.29
LIN54-207ENST00000508171 IGLV5-48A0A075B6I7 105 aa6.99□□□□□ -1.29
LIN54-207ENST00000508171 MRPL55Q7Z7F7 128 aaKnown RBP6.99□□□□□ -1.29
LIN54-207ENST00000508171 KRTAP1-5Q9BYS1 174 aa6.99□□□□□ -1.29
LIN54-207ENST00000508171 DHRS4-AS1Q9P1J3 65 aa6.99□□□□□ -1.29
LIN54-207ENST00000508171 TRAV7A0A075B6U4 112 aa6.99□□□□□ -1.29
LIN54-207ENST00000508171 PRYO14603 147 aa6.99□□□□□ -1.29
LIN54-207ENST00000508171 TMEM258P61165 79 aa6.99□□□□□ -1.29
LIN54-207ENST00000508171 DNAH7Q8WXX0 4024 aa6.99□□□□□ -1.29
LIN54-207ENST00000508171 NREPQ16612 68 aa6.98□□□□□ -1.29
LIN54-207ENST00000508171 DNAH9Q9NYC9 4486 aa6.98□□□□□ -1.29
LIN54-207ENST00000508171 DPH3Q96FX2 82 aa6.98□□□□□ -1.29
LIN54-207ENST00000508171 SRRM2Q9UQ35 2752 aaKnown RBP6.96□□□□□ -1.29
LIN54-207ENST00000508171 J3KT08 172 aa6.96□□□□□ -1.29
LIN54-207ENST00000508171 BCE1O60756 84 aa6.96□□□□□ -1.29
LIN54-207ENST00000508171 A0A1W2PNM2 257 aa6.96□□□□□ -1.3
LIN54-207ENST00000508171 BPY2O14599 106 aa6.96□□□□□ -1.3
LIN54-207ENST00000508171 UBE2BP63146 152 aa6.96□□□□□ -1.3
LIN54-207ENST00000508171 IGKV2-24A0A0C4DH68 120 aa6.95□□□□□ -1.3
LIN54-207ENST00000508171 IGKV4-1P06312 121 aa6.95□□□□□ -1.3
LIN54-207ENST00000508171 SNURFQ9Y675 71 aa6.95□□□□□ -1.3
LIN54-207ENST00000508171 TNP2Q05952 138 aa6.94□□□□□ -1.3
LIN54-207ENST00000508171 C1orf137Q5JT78 98 aa6.94□□□□□ -1.3
LIN54-207ENST00000508171 A0A096LNI7 61 aa6.94□□□□□ -1.3
LIN54-207ENST00000508171 RPS28P62857 69 aaKnown RBP6.94□□□□□ -1.3
LIN54-207ENST00000508171 REG3GQ6UW15 175 aa6.94□□□□□ -1.3
LIN54-207ENST00000508171 OXTP01178 125 aa6.93□□□□□ -1.3
LIN54-207ENST00000508171 A0A1W2PNN7 141 aa6.93□□□□□ -1.3
LIN54-207ENST00000508171 FUSP35637 526 aaKnown RBP eCLIP6.93□□□□□ -1.3
LIN54-207ENST00000508171 A0A0G2JQZ4 141 aa6.92□□□□□ -1.3
LIN54-207ENST00000508171 H7BZZ5 65 aa6.92□□□□□ -1.3
LIN54-207ENST00000508171 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.92□□□□□ -1.3
LIN54-207ENST00000508171 PSCAO43653 123 aa6.92□□□□□ -1.3
LIN54-207ENST00000508171 KLKP1Q107X0 134 aa6.91□□□□□ -1.3
LIN54-207ENST00000508171 PRLHP81277 87 aa6.91□□□□□ -1.3
LIN54-207ENST00000508171 SMIM29Q86T20 159 aa6.91□□□□□ -1.3
LIN54-207ENST00000508171 C16orf90A8MZG2 172 aa6.9□□□□□ -1.3
LIN54-207ENST00000508171 Q8NBF4 154 aa6.9□□□□□ -1.31
LIN54-207ENST00000508171 UBE2DNLQ8IWF7 75 aa6.89□□□□□ -1.31
LIN54-207ENST00000508171 CHTF8P0CG12 524 aa6.89□□□□□ -1.31
LIN54-207ENST00000508171 CNBPP62633 177 aaKnown RBP6.89□□□□□ -1.31
LIN54-207ENST00000508171 APLNQ9ULZ1 77 aa6.89□□□□□ -1.31
LIN54-207ENST00000508171 KRTAP11-1Q8IUC1 163 aa6.88□□□□□ -1.31
LIN54-207ENST00000508171 SPRR4Q96PI1 79 aa6.88□□□□□ -1.31
LIN54-207ENST00000508171 FAM236DA0A1B0GTK5 79 aa6.87□□□□□ -1.31
LIN54-207ENST00000508171 F8WEM9 126 aa6.87□□□□□ -1.31
LIN54-207ENST00000508171 FAM236CP0DP71 79 aa6.87□□□□□ -1.31
LIN54-207ENST00000508171 LINC00476Q8WZB0 136 aa6.87□□□□□ -1.31
LIN54-207ENST00000508171 HIGD2AQ9BW72 106 aa6.87□□□□□ -1.31
LIN54-207ENST00000508171 OCR1Q9BZK8 76 aa6.87□□□□□ -1.31
LIN54-207ENST00000508171 A0A1B0GW54 56 aa6.86□□□□□ -1.31
LIN54-207ENST00000508171 PHF5AQ7RTV0 110 aaKnown RBP6.85□□□□□ -1.31
LIN54-207ENST00000508171 DSCR10P59022 87 aa6.85□□□□□ -1.31
LIN54-207ENST00000508171 TMEM254Q8TBM7 123 aa6.85□□□□□ -1.31
LIN54-207ENST00000508171 C4orf26Q17RF5 130 aa6.84□□□□□ -1.31
LIN54-207ENST00000508171 IGFL1Q6UW32 110 aa6.84□□□□□ -1.31
LIN54-207ENST00000508171 PLECQ15149 4684 aaKnown RBP6.83□□□□□ -1.32
LIN54-207ENST00000508171 MDFIQ99750 246 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms