RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 LOC107984156A0A0G2JMH3 177 aa9.01□□□□□ -0.97
PDLIM7-213ENST00000505074 KRTAP13-3Q3SY46 172 aa9.01□□□□□ -0.97
PDLIM7-213ENST00000505074 C9orf153Q5TBE3 101 aa9.01□□□□□ -0.97
PDLIM7-213ENST00000505074 ARL17AQ8IVW1 177 aa9.01□□□□□ -0.97
PDLIM7-213ENST00000505074 JOSD1Q15040 202 aaPredicted RBP9□□□□□ -0.97
PDLIM7-213ENST00000505074 NDUFC2O95298 119 aa8.99□□□□□ -0.97
PDLIM7-213ENST00000505074 SSBP3-AS1Q7Z2R9 100 aa8.99□□□□□ -0.97
PDLIM7-213ENST00000505074 IGLV6-57P01721 117 aa8.98□□□□□ -0.97
PDLIM7-213ENST00000505074 A0A0J9YXY3 114 aa8.96□□□□□ -0.98
PDLIM7-213ENST00000505074 ZNF73O43830 326 aaPredicted RBP8.96□□□□□ -0.98
PDLIM7-213ENST00000505074 CFC1BP0CG36 223 aa8.96□□□□□ -0.98
PDLIM7-213ENST00000505074 HINT1P49773 126 aaPredicted RBP8.96□□□□□ -0.98
PDLIM7-213ENST00000505074 Q8N377 158 aa8.96□□□□□ -0.98
PDLIM7-213ENST00000505074 SLC25A20O43772 301 aa8.95□□□□□ -0.98
PDLIM7-213ENST00000505074 RPS29P62273 56 aaKnown RBP8.95□□□□□ -0.98
PDLIM7-213ENST00000505074 SOSTDC1Q6X4U4 206 aa8.95□□□□□ -0.98
PDLIM7-213ENST00000505074 ADAMTSL4-AS1Q5T5F5 129 aa8.94□□□□□ -0.98
PDLIM7-213ENST00000505074 LCE2CQ5TA81 110 aa8.94□□□□□ -0.98
PDLIM7-213ENST00000505074 OR13C6PQ8NH95 151 aa8.94□□□□□ -0.98
PDLIM7-213ENST00000505074 E9PLD3 99 aa8.93□□□□□ -0.98
PDLIM7-213ENST00000505074 ST20-AS1Q8NBB2 130 aa8.93□□□□□ -0.98
PDLIM7-213ENST00000505074 CBY1Q9Y3M2 126 aa8.93□□□□□ -0.98
PDLIM7-213ENST00000505074 COLCA2A8K830 154 aa8.92□□□□□ -0.98
PDLIM7-213ENST00000505074 KRTAP9-7A8MTY7 169 aa8.92□□□□□ -0.98
PDLIM7-213ENST00000505074 EIF4EBP3O60516 100 aaPredicted RBP8.92□□□□□ -0.98
PDLIM7-213ENST00000505074 MT1HP80294 61 aa8.89□□□□□ -0.99
PDLIM7-213ENST00000505074 SPANXCQ9NY87 97 aa8.89□□□□□ -0.99
PDLIM7-213ENST00000505074 SYS1-DBNDD2H3BUS1 97 aa8.88□□□□□ -0.99
PDLIM7-213ENST00000505074 HRCT1Q6UXD1 115 aa8.88□□□□□ -0.99
PDLIM7-213ENST00000505074 LINC00308Q8TCZ7 52 aa8.88□□□□□ -0.99
PDLIM7-213ENST00000505074 SLC25A34Q6PIV7 304 aa8.87□□□□□ -0.99
PDLIM7-213ENST00000505074 ZNF815PA8K554 130 aa8.86□□□□□ -0.99
PDLIM7-213ENST00000505074 C5orf52A6NGY3 159 aa8.85□□□□□ -0.99
PDLIM7-213ENST00000505074 LORP23490 312 aaPredicted RBP8.85□□□□□ -0.99
PDLIM7-213ENST00000505074 LIMD2Q9BT23 127 aa8.85□□□□□ -0.99
PDLIM7-213ENST00000505074 DHRS4-AS1Q9P1J3 65 aa8.85□□□□□ -0.99
PDLIM7-213ENST00000505074 TIMM17BO60830 172 aa8.84□□□□□ -0.99
PDLIM7-213ENST00000505074 LITAFQ99732 161 aa8.84□□□□□ -0.99
PDLIM7-213ENST00000505074 SPANXDQ9BXN6 97 aa8.84□□□□□ -0.99
PDLIM7-213ENST00000505074 LAMTOR3Q9UHA4 124 aa8.84□□□□□ -0.99
PDLIM7-213ENST00000505074 TMA7Q9Y2S6 64 aaKnown RBP8.84□□□□□ -0.99
PDLIM7-213ENST00000505074 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.83□□□□□ -1
PDLIM7-213ENST00000505074 COX7BP24311 80 aa8.83□□□□□ -1
PDLIM7-213ENST00000505074 KRTAP19-2Q3LHN2 52 aa8.83□□□□□ -1
PDLIM7-213ENST00000505074 XP32Q5T750 250 aa8.83□□□□□ -1
PDLIM7-213ENST00000505074 HIST1H2BKO60814 126 aa8.82□□□□□ -1
PDLIM7-213ENST00000505074 HIST1H2BJP06899 126 aa8.82□□□□□ -1
PDLIM7-213ENST00000505074 HIST1H2BOP23527 126 aa8.82□□□□□ -1
PDLIM7-213ENST00000505074 HIST1H2BBP33778 126 aa8.82□□□□□ -1
PDLIM7-213ENST00000505074 HIST1H2BDP58876 126 aa8.82□□□□□ -1
PDLIM7-213ENST00000505074 KRTAP10-6P60371 365 aaPredicted RBP8.82□□□□□ -1
PDLIM7-213ENST00000505074 HIST1H2BCP62807 126 aa8.82□□□□□ -1
PDLIM7-213ENST00000505074 HIST2H2BEQ16778 126 aa8.82□□□□□ -1
PDLIM7-213ENST00000505074 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.82□□□□□ -1
PDLIM7-213ENST00000505074 LINC01545Q5VT33 79 aa8.82□□□□□ -1
PDLIM7-213ENST00000505074 DEFB105AQ8NG35 78 aa8.82□□□□□ -1
PDLIM7-213ENST00000505074 HIST1H2BHQ93079 126 aa8.82□□□□□ -1
PDLIM7-213ENST00000505074 HIST1H2BNQ99877 126 aa8.82□□□□□ -1
PDLIM7-213ENST00000505074 HIST1H2BMQ99879 126 aa8.82□□□□□ -1
PDLIM7-213ENST00000505074 TTTY13Q9BZ97 58 aa8.82□□□□□ -1
PDLIM7-213ENST00000505074 TAL2Q16559 108 aa8.81□□□□□ -1
PDLIM7-213ENST00000505074 C6orf99Q4VX62 202 aa8.81□□□□□ -1
PDLIM7-213ENST00000505074 PET117Q6UWS5 81 aa8.81□□□□□ -1
PDLIM7-213ENST00000505074 SPRR1BP22528 89 aa8.8□□□□□ -1
PDLIM7-213ENST00000505074 Q1RN00 199 aa8.8□□□□□ -1
PDLIM7-213ENST00000505074 LINC00518Q8N0U6 118 aa8.8□□□□□ -1
PDLIM7-213ENST00000505074 ELOF1P60002 83 aaKnown RBP8.79□□□□□ -1
PDLIM7-213ENST00000505074 SCGB1D4Q6XE38 83 aa8.79□□□□□ -1
PDLIM7-213ENST00000505074 C9orf92A6NGG3 77 aa8.78□□□□□ -1
PDLIM7-213ENST00000505074 KRTDAPP60985 99 aa8.78□□□□□ -1
PDLIM7-213ENST00000505074 C3orf79P0CE67 100 aa8.77□□□□□ -1.01
PDLIM7-213ENST00000505074 H7C2G1 150 aa8.75□□□□□ -1.01
PDLIM7-213ENST00000505074 COPS9Q8WXC6 57 aa8.75□□□□□ -1.01
PDLIM7-213ENST00000505074 PRO1933Q9H354 126 aa8.75□□□□□ -1.01
PDLIM7-213ENST00000505074 TEX49A0A1B0GTD5 131 aa8.74□□□□□ -1.01
PDLIM7-213ENST00000505074 A6NDN8 102 aa8.74□□□□□ -1.01
PDLIM7-213ENST00000505074 M0R2T5 61 aa8.74□□□□□ -1.01
PDLIM7-213ENST00000505074 C20orf202A1L168 122 aa8.73□□□□□ -1.01
PDLIM7-213ENST00000505074 PCOTHQ58A44 107 aa8.72□□□□□ -1.01
PDLIM7-213ENST00000505074 IGLV8-61A0A075B6I0 122 aa8.71□□□□□ -1.02
PDLIM7-213ENST00000505074 A0A1B0GWB2 263 aa8.71□□□□□ -1.02
PDLIM7-213ENST00000505074 S100A6P06703 90 aa8.71□□□□□ -1.02
PDLIM7-213ENST00000505074 TRBV7-6A0A0J9YX20 115 aa8.7□□□□□ -1.02
PDLIM7-213ENST00000505074 AKR1D1P51857 326 aa8.7□□□□□ -1.02
PDLIM7-213ENST00000505074 CD164Q04900 197 aa8.7□□□□□ -1.02
PDLIM7-213ENST00000505074 ANKRD39Q53RE8 183 aa8.7□□□□□ -1.02
PDLIM7-213ENST00000505074 ATOH7Q8N100 152 aa8.7□□□□□ -1.02
PDLIM7-213ENST00000505074 IFITM1P13164 125 aa8.69□□□□□ -1.02
PDLIM7-213ENST00000505074 COA6Q5JTJ3 125 aaKnown RBP8.69□□□□□ -1.02
PDLIM7-213ENST00000505074 MUSTN1Q8IVN3 82 aa8.68□□□□□ -1.02
PDLIM7-213ENST00000505074 LOC105371267A0A1B0GV96 52 aa8.67□□□□□ -1.02
PDLIM7-213ENST00000505074 A0A0G2JQZ4 141 aa8.66□□□□□ -1.02
PDLIM7-213ENST00000505074 Q6ZVH6 145 aa8.66□□□□□ -1.02
PDLIM7-213ENST00000505074 SNRPEP62304 92 aaKnown RBP8.65□□□□□ -1.02
PDLIM7-213ENST00000505074 SMIM29Q86T20 159 aa8.65□□□□□ -1.02
PDLIM7-213ENST00000505074 PCP2Q8IVA1 136 aa8.65□□□□□ -1.02
PDLIM7-213ENST00000505074 NHP2Q9NX24 153 aaKnown RBP8.65□□□□□ -1.02
PDLIM7-213ENST00000505074 IGLV5-48A0A075B6I7 105 aa8.64□□□□□ -1.03
PDLIM7-213ENST00000505074 TRAV13-2A0A0B4J235 113 aa8.64□□□□□ -1.03
PDLIM7-213ENST00000505074 A4D1N5 150 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms