RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 IGLC3P0DOY3 106 aa3.77□□□□□ -1.81
NPIPB3-203ENST00000504841 RPS29P62273 56 aaKnown RBP3.77□□□□□ -1.81
NPIPB3-203ENST00000504841 COX17Q14061 63 aa3.77□□□□□ -1.81
NPIPB3-203ENST00000504841 LINC00483Q53H64 154 aa3.77□□□□□ -1.81
NPIPB3-203ENST00000504841 BOD1L2Q8IYS8 172 aa3.77□□□□□ -1.81
NPIPB3-203ENST00000504841 TRAV12-1A0A0B4J245 112 aa3.76□□□□□ -1.81
NPIPB3-203ENST00000504841 C9orf92A6NGG3 77 aa3.76□□□□□ -1.81
NPIPB3-203ENST00000504841 ATP6V1G1O75348 118 aa3.76□□□□□ -1.81
NPIPB3-203ENST00000504841 ERC2-IT1O76042 136 aa3.76□□□□□ -1.81
NPIPB3-203ENST00000504841 PMCHL1Q16048 86 aa3.76□□□□□ -1.81
NPIPB3-203ENST00000504841 SFTA2Q6UW10 78 aa3.76□□□□□ -1.81
NPIPB3-203ENST00000504841 COX6B2Q6YFQ2 88 aa3.76□□□□□ -1.81
NPIPB3-203ENST00000504841 SSBP3-AS1Q7Z2R9 100 aa3.76□□□□□ -1.81
NPIPB3-203ENST00000504841 TRBV10-3A0A0K0K1G6 114 aa3.75□□□□□ -1.81
NPIPB3-203ENST00000504841 SPRR1AP35321 89 aa3.75□□□□□ -1.81
NPIPB3-203ENST00000504841 TMEM170BQ5T4T1 132 aa3.75□□□□□ -1.81
NPIPB3-203ENST00000504841 IFI27L1Q96BM0 104 aa3.75□□□□□ -1.81
NPIPB3-203ENST00000504841 CHTOPQ9Y3Y2 248 aaKnown RBP3.75□□□□□ -1.81
NPIPB3-203ENST00000504841 C11orf86A6NJI1 115 aa3.74□□□□□ -1.81
NPIPB3-203ENST00000504841 B5MCH6 92 aa3.74□□□□□ -1.81
NPIPB3-203ENST00000504841 KRTAP4-16G5E9R7 235 aaPredicted RBP3.74□□□□□ -1.81
NPIPB3-203ENST00000504841 SERF1AO75920 110 aa3.74□□□□□ -1.81
NPIPB3-203ENST00000504841 SMIM13P0DJ93 91 aa3.74□□□□□ -1.81
NPIPB3-203ENST00000504841 MEIG1Q5JSS6 88 aa3.74□□□□□ -1.81
NPIPB3-203ENST00000504841 KCNQ1DNQ9H478 68 aa3.74□□□□□ -1.81
NPIPB3-203ENST00000504841 HSPB8Q9UJY1 196 aa3.74□□□□□ -1.81
NPIPB3-203ENST00000504841 LEPROTL1O95214 131 aa3.73□□□□□ -1.81
NPIPB3-203ENST00000504841 S100A12P80511 92 aa3.73□□□□□ -1.81
NPIPB3-203ENST00000504841 HRCT1Q6UXD1 115 aa3.73□□□□□ -1.81
NPIPB3-203ENST00000504841 MIR7-3HGQ8N6C7 128 aa3.73□□□□□ -1.81
NPIPB3-203ENST00000504841 TMEM223A0PJW6 202 aa3.72□□□□□ -1.81
NPIPB3-203ENST00000504841 HIST1H2BKO60814 126 aa3.72□□□□□ -1.81
NPIPB3-203ENST00000504841 HIST1H2BJP06899 126 aa3.72□□□□□ -1.81
NPIPB3-203ENST00000504841 S100A1P23297 94 aa3.72□□□□□ -1.81
NPIPB3-203ENST00000504841 HIST1H2BOP23527 126 aa3.72□□□□□ -1.81
NPIPB3-203ENST00000504841 PLNP26678 52 aa3.72□□□□□ -1.81
NPIPB3-203ENST00000504841 HIST1H2BBP33778 126 aa3.72□□□□□ -1.81
NPIPB3-203ENST00000504841 HIST1H2BDP58876 126 aa3.72□□□□□ -1.81
NPIPB3-203ENST00000504841 HIST1H2BCP62807 126 aa3.72□□□□□ -1.81
NPIPB3-203ENST00000504841 HIST2H2BEQ16778 126 aa3.72□□□□□ -1.81
NPIPB3-203ENST00000504841 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.72□□□□□ -1.81
NPIPB3-203ENST00000504841 HIST1H2BHQ93079 126 aa3.72□□□□□ -1.81
NPIPB3-203ENST00000504841 HIST1H2BNQ99877 126 aa3.72□□□□□ -1.81
NPIPB3-203ENST00000504841 HIST1H2BMQ99879 126 aa3.72□□□□□ -1.81
NPIPB3-203ENST00000504841 Q9BRP9 147 aa3.72□□□□□ -1.81
NPIPB3-203ENST00000504841 LINC00587B1AMM8 73 aa3.71□□□□□ -1.82
NPIPB3-203ENST00000504841 DPM2O94777 84 aa3.7□□□□□ -1.82
NPIPB3-203ENST00000504841 IGLV6-57P01721 117 aa3.7□□□□□ -1.82
NPIPB3-203ENST00000504841 DDTP30046 118 aa3.7□□□□□ -1.82
NPIPB3-203ENST00000504841 HERV-K104P63124 156 aa3.7□□□□□ -1.82
NPIPB3-203ENST00000504841 COA6Q5JTJ3 125 aaKnown RBP3.7□□□□□ -1.82
NPIPB3-203ENST00000504841 Q6ZRX8 168 aa3.7□□□□□ -1.82
NPIPB3-203ENST00000504841 ST20-AS1Q8NBB2 130 aa3.7□□□□□ -1.82
NPIPB3-203ENST00000504841 LIMD2Q9BT23 127 aa3.7□□□□□ -1.82
NPIPB3-203ENST00000504841 MAP1LC3CQ9BXW4 147 aa3.7□□□□□ -1.82
NPIPB3-203ENST00000504841 FABP4P15090 132 aa3.69□□□□□ -1.82
NPIPB3-203ENST00000504841 MYMXA0A1B0GTQ4 84 aa3.68□□□□□ -1.82
NPIPB3-203ENST00000504841 H0Y8G0 127 aa3.68□□□□□ -1.82
NPIPB3-203ENST00000504841 SYS1-DBNDD2H3BUS1 97 aa3.68□□□□□ -1.82
NPIPB3-203ENST00000504841 LEPROTO15243 131 aa3.68□□□□□ -1.82
NPIPB3-203ENST00000504841 IGKCP01834 107 aa3.68□□□□□ -1.82
NPIPB3-203ENST00000504841 NMUP48645 174 aa3.68□□□□□ -1.82
NPIPB3-203ENST00000504841 HERVK_113P61574 105 aa3.68□□□□□ -1.82
NPIPB3-203ENST00000504841 TRAV23DV6A0A075B6W5 121 aa3.67□□□□□ -1.82
NPIPB3-203ENST00000504841 AKR1D1P51857 326 aa3.67□□□□□ -1.82
NPIPB3-203ENST00000504841 JOSD1Q15040 202 aaPredicted RBP3.67□□□□□ -1.82
NPIPB3-203ENST00000504841 S100A7L2Q5SY68 101 aa3.67□□□□□ -1.82
NPIPB3-203ENST00000504841 Q6Q795 121 aa3.67□□□□□ -1.82
NPIPB3-203ENST00000504841 PET117Q6UWS5 81 aa3.67□□□□□ -1.82
NPIPB3-203ENST00000504841 H7C2G1 150 aa3.66□□□□□ -1.82
NPIPB3-203ENST00000504841 J3QQQ9 107 aa3.66□□□□□ -1.82
NPIPB3-203ENST00000504841 RPL37P61927 97 aaKnown RBP3.66□□□□□ -1.82
NPIPB3-203ENST00000504841 LINC01545Q5VT33 79 aa3.66□□□□□ -1.82
NPIPB3-203ENST00000504841 MIEN1Q9BRT3 115 aa3.66□□□□□ -1.82
NPIPB3-203ENST00000504841 SPANXB1Q9NS25 103 aaPredicted RBP3.66□□□□□ -1.82
NPIPB3-203ENST00000504841 LOC107984156A0A0G2JMH3 177 aa3.65□□□□□ -1.83
NPIPB3-203ENST00000504841 TRBV10-2A0A0K0K1G8 114 aa3.65□□□□□ -1.83
NPIPB3-203ENST00000504841 E9PLD3 99 aa3.65□□□□□ -1.83
NPIPB3-203ENST00000504841 ZNF73O43830 326 aaPredicted RBP3.65□□□□□ -1.83
NPIPB3-203ENST00000504841 LGALS3P17931 250 aaKnown RBP3.65□□□□□ -1.83
NPIPB3-203ENST00000504841 ARL17AQ8IVW1 177 aa3.65□□□□□ -1.83
NPIPB3-203ENST00000504841 C20orf202A1L168 122 aa3.64□□□□□ -1.83
NPIPB3-203ENST00000504841 NPC2P61916 151 aa3.64□□□□□ -1.83
NPIPB3-203ENST00000504841 Q1RN00 199 aa3.64□□□□□ -1.83
NPIPB3-203ENST00000504841 SLC25A34Q6PIV7 304 aa3.64□□□□□ -1.83
NPIPB3-203ENST00000504841 PMCHL2Q9BQD1 86 aa3.64□□□□□ -1.83
NPIPB3-203ENST00000504841 C3orf79P0CE67 100 aa3.63□□□□□ -1.83
NPIPB3-203ENST00000504841 HINT1P49773 126 aaPredicted RBP3.63□□□□□ -1.83
NPIPB3-203ENST00000504841 TSPEAR-AS2P59090 65 aa3.63□□□□□ -1.83
NPIPB3-203ENST00000504841 KRTDAPP60985 99 aa3.63□□□□□ -1.83
NPIPB3-203ENST00000504841 SNRPEP62304 92 aaKnown RBP3.63□□□□□ -1.83
NPIPB3-203ENST00000504841 LAMTOR3Q9UHA4 124 aa3.63□□□□□ -1.83
NPIPB3-203ENST00000504841 TIMM17BO60830 172 aa3.62□□□□□ -1.83
NPIPB3-203ENST00000504841 DEFB105AQ8NG35 78 aa3.62□□□□□ -1.83
NPIPB3-203ENST00000504841 A0A0G2JQZ4 141 aa3.61□□□□□ -1.83
NPIPB3-203ENST00000504841 A0A0J9YXY3 114 aa3.61□□□□□ -1.83
NPIPB3-203ENST00000504841 NDUFC2O95298 119 aa3.61□□□□□ -1.83
NPIPB3-203ENST00000504841 S100A6P06703 90 aa3.61□□□□□ -1.83
NPIPB3-203ENST00000504841 CFC1P0CG37 223 aa3.61□□□□□ -1.83
NPIPB3-203ENST00000504841 SPRR1BP22528 89 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms