RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 TRAV10A0A0B4J240 114 aa9.82□□□□□ -0.84
UBXN11-216ENST00000496466 C4orf26Q17RF5 130 aa9.82□□□□□ -0.84
UBXN11-216ENST00000496466 F8WDY8 70 aa9.81□□□□□ -0.84
UBXN11-216ENST00000496466 SYCNQ0VAF6 134 aa9.8□□□□□ -0.84
UBXN11-216ENST00000496466 DNAH10OSP0CZ25 163 aa9.79□□□□□ -0.84
UBXN11-216ENST00000496466 PDE6GP18545 87 aa9.78□□□□□ -0.84
UBXN11-216ENST00000496466 HRCT1Q6UXD1 115 aa9.78□□□□□ -0.84
UBXN11-216ENST00000496466 FAM19A1Q7Z5A9 133 aa9.78□□□□□ -0.84
UBXN11-216ENST00000496466 LINC00588Q9Y4M8 146 aa9.78□□□□□ -0.84
UBXN11-216ENST00000496466 MGAM2Q2M2H8 2515 aa9.78□□□□□ -0.84
UBXN11-216ENST00000496466 LINC00528Q8N1L1 170 aa9.78□□□□□ -0.84
UBXN11-216ENST00000496466 HUWE1Q7Z6Z7 4374 aaKnown RBP9.77□□□□□ -0.84
UBXN11-216ENST00000496466 GHRHP01286 108 aa9.77□□□□□ -0.85
UBXN11-216ENST00000496466 TRBV7-4A0A0J9YYF1 115 aa9.76□□□□□ -0.85
UBXN11-216ENST00000496466 EPM2AB3EWF7 344 aa9.74□□□□□ -0.85
UBXN11-216ENST00000496466 Q6ZVQ6 151 aa9.74□□□□□ -0.85
UBXN11-216ENST00000496466 SERTAD4-AS1Q5TG53 156 aa9.73□□□□□ -0.85
UBXN11-216ENST00000496466 DNAH1Q9P2D7 4330 aa9.73□□□□□ -0.85
UBXN11-216ENST00000496466 LINC01547P58512 204 aaPredicted RBP9.72□□□□□ -0.85
UBXN11-216ENST00000496466 NKAPP1Q8N9T2 125 aa9.72□□□□□ -0.85
UBXN11-216ENST00000496466 MDFIQ99750 246 aa9.72□□□□□ -0.85
UBXN11-216ENST00000496466 KCNQ1DNQ9H478 68 aa9.72□□□□□ -0.85
UBXN11-216ENST00000496466 TLX1NBP0CAT3 122 aa9.71□□□□□ -0.85
UBXN11-216ENST00000496466 C7orf33Q8WU49 177 aa9.71□□□□□ -0.85
UBXN11-216ENST00000496466 HAMPP81172 84 aa9.71□□□□□ -0.86
UBXN11-216ENST00000496466 CASC10Q5T4H9 136 aa9.71□□□□□ -0.86
UBXN11-216ENST00000496466 FAM236DA0A1B0GTK5 79 aa9.7□□□□□ -0.86
UBXN11-216ENST00000496466 FAM236CP0DP71 79 aa9.7□□□□□ -0.86
UBXN11-216ENST00000496466 BCE1O60756 84 aa9.7□□□□□ -0.86
UBXN11-216ENST00000496466 SERP1Q9Y6X1 66 aa9.69□□□□□ -0.86
UBXN11-216ENST00000496466 PLA2G2DQ9UNK4 145 aa9.68□□□□□ -0.86
UBXN11-216ENST00000496466 CXCL6P80162 114 aa9.67□□□□□ -0.86
UBXN11-216ENST00000496466 C20orf197Q8N268 126 aa9.66□□□□□ -0.86
UBXN11-216ENST00000496466 PRO0628Q9UI54 55 aa9.66□□□□□ -0.86
UBXN11-216ENST00000496466 FAM168BA1KXE4 195 aa9.65□□□□□ -0.86
UBXN11-216ENST00000496466 H7BZZ5 65 aa9.65□□□□□ -0.87
UBXN11-216ENST00000496466 IGLV5-37A0A075B6J1 123 aa9.64□□□□□ -0.87
UBXN11-216ENST00000496466 RMI2Q96E14 147 aa9.64□□□□□ -0.87
UBXN11-216ENST00000496466 STAB2Q8WWQ8 2551 aa9.64□□□□□ -0.87
UBXN11-216ENST00000496466 TRAV7A0A075B6U4 112 aa9.64□□□□□ -0.87
UBXN11-216ENST00000496466 RPL37AP8A6NKH3 93 aa9.64□□□□□ -0.87
UBXN11-216ENST00000496466 COL7A1Q02388 2944 aa9.63□□□□□ -0.87
UBXN11-216ENST00000496466 Q8N377 158 aa9.63□□□□□ -0.87
UBXN11-216ENST00000496466 DEFB105AQ8NG35 78 aa9.63□□□□□ -0.87
UBXN11-216ENST00000496466 IGLV1-50A0A075B6I6 118 aa9.62□□□□□ -0.87
UBXN11-216ENST00000496466 KRTAP7-1Q8IUC3 87 aa9.62□□□□□ -0.87
UBXN11-216ENST00000496466 KRTAP4-16G5E9R7 235 aaPredicted RBP9.62□□□□□ -0.87
UBXN11-216ENST00000496466 KLKP1Q107X0 134 aa9.62□□□□□ -0.87
UBXN11-216ENST00000496466 SCXQ7RTU7 201 aa9.62□□□□□ -0.87
UBXN11-216ENST00000496466 PRYO14603 147 aa9.61□□□□□ -0.87
UBXN11-216ENST00000496466 Q6ZRX8 168 aa9.61□□□□□ -0.87
UBXN11-216ENST00000496466 DHRS4-AS1Q9P1J3 65 aa9.61□□□□□ -0.87
UBXN11-216ENST00000496466 SPRR1AP35321 89 aa9.6□□□□□ -0.87
UBXN11-216ENST00000496466 LINC00336Q6ZUF6 198 aa9.6□□□□□ -0.87
UBXN11-216ENST00000496466 Q9BRP9 147 aa9.6□□□□□ -0.87
UBXN11-216ENST00000496466 DNAH9Q9NYC9 4486 aa9.59□□□□□ -0.87
UBXN11-216ENST00000496466 KRTAP1-5Q9BYS1 174 aa9.59□□□□□ -0.87
UBXN11-216ENST00000496466 ETDCA0A1B0GVM5 59 aa9.58□□□□□ -0.88
UBXN11-216ENST00000496466 IGLV5-48A0A075B6I7 105 aa9.57□□□□□ -0.88
UBXN11-216ENST00000496466 SMIM26A0A096LP01 95 aa9.57□□□□□ -0.88
UBXN11-216ENST00000496466 MRPL55Q7Z7F7 128 aaKnown RBP9.56□□□□□ -0.88
UBXN11-216ENST00000496466 B9D2Q9BPU9 175 aa9.56□□□□□ -0.88
UBXN11-216ENST00000496466 APLNQ9ULZ1 77 aa9.55□□□□□ -0.88
UBXN11-216ENST00000496466 ST20-AS1Q8NBB2 130 aa9.55□□□□□ -0.88
UBXN11-216ENST00000496466 LYSTQ99698 3801 aa9.55□□□□□ -0.88
UBXN11-216ENST00000496466 NREPQ16612 68 aa9.54□□□□□ -0.88
UBXN11-216ENST00000496466 C3orf84H3BNL1 204 aa9.54□□□□□ -0.88
UBXN11-216ENST00000496466 FP248Q71RG6 208 aaPredicted RBP9.54□□□□□ -0.88
UBXN11-216ENST00000496466 UBE2DNLQ8IWF7 75 aa9.54□□□□□ -0.88
UBXN11-216ENST00000496466 NDUFC1O43677 76 aa9.52□□□□□ -0.89
UBXN11-216ENST00000496466 ERC2-IT1O76042 136 aa9.52□□□□□ -0.89
UBXN11-216ENST00000496466 ATP5EP56381 51 aaPredicted RBP9.52□□□□□ -0.89
UBXN11-216ENST00000496466 TNP2Q05952 138 aa9.52□□□□□ -0.89
UBXN11-216ENST00000496466 DNAH10Q8IVF4 4471 aa9.51□□□□□ -0.89
UBXN11-216ENST00000496466 Q8N9L7 120 aa9.5□□□□□ -0.89
UBXN11-216ENST00000496466 A0A1W2PNM2 257 aa9.5□□□□□ -0.89
UBXN11-216ENST00000496466 F8WEM9 126 aa9.5□□□□□ -0.89
UBXN11-216ENST00000496466 IGKV4-1P06312 121 aa9.5□□□□□ -0.89
UBXN11-216ENST00000496466 REG3GQ6UW15 175 aa9.5□□□□□ -0.89
UBXN11-216ENST00000496466 UBE2BP63146 152 aa9.49□□□□□ -0.89
UBXN11-216ENST00000496466 C1orf137Q5JT78 98 aa9.49□□□□□ -0.89
UBXN11-216ENST00000496466 BPY2O14599 106 aa9.48□□□□□ -0.89
UBXN11-216ENST00000496466 FUSP35637 526 aaKnown RBP eCLIP9.48□□□□□ -0.89
UBXN11-216ENST00000496466 SNURFQ9Y675 71 aa9.48□□□□□ -0.89
UBXN11-216ENST00000496466 PSCAO43653 123 aa9.48□□□□□ -0.89
UBXN11-216ENST00000496466 A0A096LNI7 61 aa9.47□□□□□ -0.89
UBXN11-216ENST00000496466 A0A1B0GW54 56 aa9.47□□□□□ -0.89
UBXN11-216ENST00000496466 DYNC2H1Q8NCM8 4307 aaKnown RBP9.47□□□□□ -0.89
UBXN11-216ENST00000496466 CSMD3Q7Z407 3707 aa9.46□□□□□ -0.89
UBXN11-216ENST00000496466 CNBPP62633 177 aaKnown RBP9.46□□□□□ -0.9
UBXN11-216ENST00000496466 TENM2Q9NT68 2774 aa9.46□□□□□ -0.9
UBXN11-216ENST00000496466 C16orf90A8MZG2 172 aa9.45□□□□□ -0.9
UBXN11-216ENST00000496466 Q8NBF4 154 aa9.45□□□□□ -0.9
UBXN11-216ENST00000496466 IGKV2-24A0A0C4DH68 120 aa9.44□□□□□ -0.9
UBXN11-216ENST00000496466 A0A1W2PNN7 141 aa9.44□□□□□ -0.9
UBXN11-216ENST00000496466 DNHD1Q96M86 4753 aa9.44□□□□□ -0.9
UBXN11-216ENST00000496466 SMIM29Q86T20 159 aa9.43□□□□□ -0.9
UBXN11-216ENST00000496466 DNAH7Q8WXX0 4024 aa9.43□□□□□ -0.9
UBXN11-216ENST00000496466 SPRR4Q96PI1 79 aa9.43□□□□□ -0.9
UBXN11-216ENST00000496466 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms