RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SPRR1AP35321 89 aa4.33□□□□□ -1.72
MSH5-217ENST00000494458 RPL18AQ02543 176 aaKnown RBP4.33□□□□□ -1.72
MSH5-217ENST00000494458 GAGE2EQ4V326 116 aa4.33□□□□□ -1.72
MSH5-217ENST00000494458 SERTAD4-AS1Q5TG53 156 aa4.33□□□□□ -1.72
MSH5-217ENST00000494458 CLEC2BQ92478 149 aa4.33□□□□□ -1.72
MSH5-217ENST00000494458 GAGE2DQ9UEU5 116 aa4.33□□□□□ -1.72
MSH5-217ENST00000494458 CBY1Q9Y3M2 126 aa4.33□□□□□ -1.72
MSH5-217ENST00000494458 C22orf24Q9Y442 160 aa4.33□□□□□ -1.72
MSH5-217ENST00000494458 DNAH11Q96DT5 4516 aa4.33□□□□□ -1.72
MSH5-217ENST00000494458 IGLV1-50A0A075B6I6 118 aa4.32□□□□□ -1.72
MSH5-217ENST00000494458 H3BT86 120 aa4.32□□□□□ -1.72
MSH5-217ENST00000494458 NCR3O14931 201 aa4.32□□□□□ -1.72
MSH5-217ENST00000494458 SLC25A20O43772 301 aa4.32□□□□□ -1.72
MSH5-217ENST00000494458 C1orf134Q5TEV5 83 aa4.32□□□□□ -1.72
MSH5-217ENST00000494458 ANKRD29Q8N6D5 301 aa4.32□□□□□ -1.72
MSH5-217ENST00000494458 OR13C6PQ8NH95 151 aa4.32□□□□□ -1.72
MSH5-217ENST00000494458 PKIGQ9Y2B9 76 aa4.32□□□□□ -1.72
MSH5-217ENST00000494458 FAT2Q9NYQ8 4349 aa4.32□□□□□ -1.72
MSH5-217ENST00000494458 A0A096LNI7 61 aa4.31□□□□□ -1.72
MSH5-217ENST00000494458 M0R2N4 97 aa4.31□□□□□ -1.72
MSH5-217ENST00000494458 S100A7L2Q5SY68 101 aa4.31□□□□□ -1.72
MSH5-217ENST00000494458 LINC00575Q6W349 94 aa4.31□□□□□ -1.72
MSH5-217ENST00000494458 TEN1Q86WV5 123 aa4.31□□□□□ -1.72
MSH5-217ENST00000494458 C7orf33Q8WU49 177 aa4.31□□□□□ -1.72
MSH5-217ENST00000494458 DNAH8Q96JB1 4490 aa4.31□□□□□ -1.72
MSH5-217ENST00000494458 SACSQ9NZJ4 4579 aa4.31□□□□□ -1.72
MSH5-217ENST00000494458 TRAV23DV6A0A075B6W5 121 aa4.3□□□□□ -1.72
MSH5-217ENST00000494458 A0A087WYN8 130 aa4.3□□□□□ -1.72
MSH5-217ENST00000494458 A0A1W2PNN7 141 aa4.3□□□□□ -1.72
MSH5-217ENST00000494458 FAM168BA1KXE4 195 aa4.3□□□□□ -1.72
MSH5-217ENST00000494458 C9JAW5 83 aa4.3□□□□□ -1.72
MSH5-217ENST00000494458 ZNF73O43830 326 aaPredicted RBP4.3□□□□□ -1.72
MSH5-217ENST00000494458 INAFM2P0DMQ5 153 aa4.3□□□□□ -1.72
MSH5-217ENST00000494458 ELOF1P60002 83 aaKnown RBP4.3□□□□□ -1.72
MSH5-217ENST00000494458 GAGE2BQ13066 116 aa4.3□□□□□ -1.72
MSH5-217ENST00000494458 ETDBQ3ZM63 59 aa4.3□□□□□ -1.72
MSH5-217ENST00000494458 C6orf99Q4VX62 202 aa4.3□□□□□ -1.72
MSH5-217ENST00000494458 LINC00474Q9P2X8 69 aa4.3□□□□□ -1.72
MSH5-217ENST00000494458 RTL8CO15255 209 aa4.29□□□□□ -1.72
MSH5-217ENST00000494458 LY6G6CO95867 125 aa4.29□□□□□ -1.72
MSH5-217ENST00000494458 OCIAD2Q56VL3 154 aa4.29□□□□□ -1.72
MSH5-217ENST00000494458 OBSCN-AS1Q96MR7 158 aa4.29□□□□□ -1.72
MSH5-217ENST00000494458 PKD1P98161 4303 aa4.28□□□□□ -1.72
MSH5-217ENST00000494458 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.28□□□□□ -1.72
MSH5-217ENST00000494458 PRYO14603 147 aa4.28□□□□□ -1.72
MSH5-217ENST00000494458 BAALC-AS2P0C853 105 aa4.28□□□□□ -1.72
MSH5-217ENST00000494458 MRPL55Q7Z7F7 128 aaKnown RBP4.28□□□□□ -1.72
MSH5-217ENST00000494458 MTURNQ8N3F0 131 aa4.28□□□□□ -1.72
MSH5-217ENST00000494458 DIRC1Q969H9 104 aa4.28□□□□□ -1.72
MSH5-217ENST00000494458 HYDINQ4G0P3 5121 aa4.27□□□□□ -1.73
MSH5-217ENST00000494458 H3BQ85 93 aa4.27□□□□□ -1.73
MSH5-217ENST00000494458 NKAPP1Q8N9T2 125 aa4.27□□□□□ -1.73
MSH5-217ENST00000494458 SPACA4Q8TDM5 124 aa4.27□□□□□ -1.73
MSH5-217ENST00000494458 PPDPFLQ8WWR9 84 aa4.27□□□□□ -1.73
MSH5-217ENST00000494458 DNAH5Q8TE73 4624 aa4.26□□□□□ -1.73
MSH5-217ENST00000494458 hADV29S1A0JD25 119 aa4.26□□□□□ -1.73
MSH5-217ENST00000494458 B5MCH6 92 aa4.26□□□□□ -1.73
MSH5-217ENST00000494458 H0Y9J4 135 aa4.26□□□□□ -1.73
MSH5-217ENST00000494458 PANO1I0J062 215 aa4.26□□□□□ -1.73
MSH5-217ENST00000494458 COX7BP24311 80 aa4.26□□□□□ -1.73
MSH5-217ENST00000494458 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.26□□□□□ -1.73
MSH5-217ENST00000494458 LCE6AA0A183 80 aa4.25□□□□□ -1.73
MSH5-217ENST00000494458 TMEM256-PLSCR3K7ERE1 68 aa4.25□□□□□ -1.73
MSH5-217ENST00000494458 K7ERU9 68 aa4.25□□□□□ -1.73
MSH5-217ENST00000494458 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
MSH5-217ENST00000494458 Q6ZRX8 168 aa4.25□□□□□ -1.73
MSH5-217ENST00000494458 PLAC8Q9NZF1 115 aa4.25□□□□□ -1.73
MSH5-217ENST00000494458 ORMDL1Q9P0S3 153 aa4.25□□□□□ -1.73
MSH5-217ENST00000494458 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.25□□□□□ -1.73
MSH5-217ENST00000494458 TEX49A0A1B0GTD5 131 aa4.24□□□□□ -1.73
MSH5-217ENST00000494458 SNCGO76070 127 aa4.24□□□□□ -1.73
MSH5-217ENST00000494458 CHTF8P0CG12 524 aa4.24□□□□□ -1.73
MSH5-217ENST00000494458 LINC01547P58512 204 aaPredicted RBP4.24□□□□□ -1.73
MSH5-217ENST00000494458 Q6ZSA8 131 aa4.24□□□□□ -1.73
MSH5-217ENST00000494458 FAM19A5Q7Z5A7 132 aaPredicted RBP4.24□□□□□ -1.73
MSH5-217ENST00000494458 KRTAP11-1Q8IUC1 163 aa4.24□□□□□ -1.73
MSH5-217ENST00000494458 Q9BRP9 147 aa4.24□□□□□ -1.73
MSH5-217ENST00000494458 DHRS4-AS1Q9P1J3 65 aa4.24□□□□□ -1.73
MSH5-217ENST00000494458 IGLV5-48A0A075B6I7 105 aa4.23□□□□□ -1.73
MSH5-217ENST00000494458 IGKV2-24A0A0C4DH68 120 aa4.23□□□□□ -1.73
MSH5-217ENST00000494458 RPL37AP8A6NKH3 93 aa4.23□□□□□ -1.73
MSH5-217ENST00000494458 DNAL4O96015 105 aa4.23□□□□□ -1.73
MSH5-217ENST00000494458 KRTAP10-2P60368 255 aa4.23□□□□□ -1.73
MSH5-217ENST00000494458 REG3GQ6UW15 175 aa4.23□□□□□ -1.73
MSH5-217ENST00000494458 KRTAP13-1Q8IUC0 172 aa4.23□□□□□ -1.73
MSH5-217ENST00000494458 IGLV5-52A0A0A0MRZ9 124 aa4.22□□□□□ -1.73
MSH5-217ENST00000494458 FAM240AA0A1B0GVK7 77 aa4.22□□□□□ -1.73
MSH5-217ENST00000494458 J3QR89 54 aa4.22□□□□□ -1.73
MSH5-217ENST00000494458 GHRHP01286 108 aa4.22□□□□□ -1.73
MSH5-217ENST00000494458 Q6ZQY7 126 aa4.22□□□□□ -1.73
MSH5-217ENST00000494458 JMJD7-PLA2G4BH0Y9G9 81 aa4.21□□□□□ -1.74
MSH5-217ENST00000494458 PHF5AQ7RTV0 110 aaKnown RBP4.21□□□□□ -1.74
MSH5-217ENST00000494458 SMCR5Q8TEV8 140 aa4.21□□□□□ -1.74
MSH5-217ENST00000494458 ETDCA0A1B0GVM5 59 aa4.2□□□□□ -1.74
MSH5-217ENST00000494458 LINC00336Q6ZUF6 198 aa4.2□□□□□ -1.74
MSH5-217ENST00000494458 Q8N377 158 aa4.2□□□□□ -1.74
MSH5-217ENST00000494458 CDIP1Q9H305 208 aa4.2□□□□□ -1.74
MSH5-217ENST00000494458 LOC110117498A0A087WWA1 95 aa4.19□□□□□ -1.74
MSH5-217ENST00000494458 A0A1B0GVY2 172 aa4.19□□□□□ -1.74
MSH5-217ENST00000494458 BCE1O60756 84 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms