RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.81□□□□□ -1.32
CLCN6-208ENST00000494028 SNCGO76070 127 aa6.81□□□□□ -1.32
CLCN6-208ENST00000494028 ACYP1P07311 99 aa6.81□□□□□ -1.32
CLCN6-208ENST00000494028 SCGB1A1P11684 91 aa6.81□□□□□ -1.32
CLCN6-208ENST00000494028 SPRR1AP35321 89 aa6.81□□□□□ -1.32
CLCN6-208ENST00000494028 C21orf62-AS1Q17RA5 79 aa6.81□□□□□ -1.32
CLCN6-208ENST00000494028 GAGE2AQ6NT46 116 aa6.81□□□□□ -1.32
CLCN6-208ENST00000494028 SMCR5Q8TEV8 140 aa6.81□□□□□ -1.32
CLCN6-208ENST00000494028 LYSTQ99698 3801 aa6.81□□□□□ -1.32
CLCN6-208ENST00000494028 IGLV1-50A0A075B6I6 118 aa6.8□□□□□ -1.32
CLCN6-208ENST00000494028 C16orf90A8MZG2 172 aa6.8□□□□□ -1.32
CLCN6-208ENST00000494028 KRTAP4-16G5E9R7 235 aaPredicted RBP6.8□□□□□ -1.32
CLCN6-208ENST00000494028 JMJD7-PLA2G4BH0Y9G9 81 aa6.8□□□□□ -1.32
CLCN6-208ENST00000494028 MRPL55Q7Z7F7 128 aaKnown RBP6.8□□□□□ -1.32
CLCN6-208ENST00000494028 SDIM1Q6ZPB5 146 aa6.79□□□□□ -1.32
CLCN6-208ENST00000494028 H3BQ85 93 aa6.78□□□□□ -1.32
CLCN6-208ENST00000494028 DNAH6Q9C0G6 4158 aa6.78□□□□□ -1.32
CLCN6-208ENST00000494028 ALMS1Q8TCU4 4167 aa6.77□□□□□ -1.33
CLCN6-208ENST00000494028 IGKV2-24A0A0C4DH68 120 aa6.77□□□□□ -1.33
CLCN6-208ENST00000494028 RPL37AP8A6NKH3 93 aa6.77□□□□□ -1.33
CLCN6-208ENST00000494028 B5MCH6 92 aa6.77□□□□□ -1.33
CLCN6-208ENST00000494028 Q6ZR54 194 aa6.77□□□□□ -1.33
CLCN6-208ENST00000494028 Q6ZRX8 168 aa6.77□□□□□ -1.33
CLCN6-208ENST00000494028 A0A1W2PNN7 141 aa6.76□□□□□ -1.33
CLCN6-208ENST00000494028 M0R2N4 97 aa6.76□□□□□ -1.33
CLCN6-208ENST00000494028 CHTF8P0CG12 524 aa6.76□□□□□ -1.33
CLCN6-208ENST00000494028 C9orf163Q8N9P6 203 aa6.76□□□□□ -1.33
CLCN6-208ENST00000494028 PKIGQ9Y2B9 76 aa6.76□□□□□ -1.33
CLCN6-208ENST00000494028 LOC110117498A0A087WWA1 95 aa6.75□□□□□ -1.33
CLCN6-208ENST00000494028 ETDCA0A1B0GVM5 59 aa6.75□□□□□ -1.33
CLCN6-208ENST00000494028 CCKP06307 115 aa6.75□□□□□ -1.33
CLCN6-208ENST00000494028 Q9BRP9 147 aa6.75□□□□□ -1.33
CLCN6-208ENST00000494028 TRBV7-7A0A0K0K1E9 115 aa6.74□□□□□ -1.33
CLCN6-208ENST00000494028 Q6Q795 121 aa6.74□□□□□ -1.33
CLCN6-208ENST00000494028 Q6ZQT0 140 aa6.74□□□□□ -1.33
CLCN6-208ENST00000494028 LINC00643Q86TS7 51 aa6.74□□□□□ -1.33
CLCN6-208ENST00000494028 LAMTOR3Q9UHA4 124 aa6.74□□□□□ -1.33
CLCN6-208ENST00000494028 A0A087WTM6 91 aa6.73□□□□□ -1.33
CLCN6-208ENST00000494028 LINC01547P58512 204 aaPredicted RBP6.73□□□□□ -1.33
CLCN6-208ENST00000494028 REG3GQ6UW15 175 aa6.73□□□□□ -1.33
CLCN6-208ENST00000494028 WWC2-AS2Q96NR7 200 aa6.73□□□□□ -1.33
CLCN6-208ENST00000494028 LINC00846Q9NV44 126 aa6.73□□□□□ -1.33
CLCN6-208ENST00000494028 DHRS4-AS1Q9P1J3 65 aa6.73□□□□□ -1.33
CLCN6-208ENST00000494028 GHRHP01286 108 aa6.72□□□□□ -1.33
CLCN6-208ENST00000494028 RBM3P98179 157 aaKnown RBP6.72□□□□□ -1.33
CLCN6-208ENST00000494028 TRBV7-4A0A0J9YYF1 115 aa6.71□□□□□ -1.34
CLCN6-208ENST00000494028 PANO1I0J062 215 aa6.71□□□□□ -1.34
CLCN6-208ENST00000494028 NDUFV3P56181 108 aaKnown RBP6.71□□□□□ -1.34
CLCN6-208ENST00000494028 Q6JHZ5 121 aa6.71□□□□□ -1.34
CLCN6-208ENST00000494028 DNAH17Q9UFH2 4485 aa6.71□□□□□ -1.34
CLCN6-208ENST00000494028 TENM2Q9NT68 2774 aa6.7□□□□□ -1.34
CLCN6-208ENST00000494028 IGLV5-48A0A075B6I7 105 aa6.7□□□□□ -1.34
CLCN6-208ENST00000494028 PHF5AQ7RTV0 110 aaKnown RBP6.7□□□□□ -1.34
CLCN6-208ENST00000494028 KRTAP11-1Q8IUC1 163 aa6.7□□□□□ -1.34
CLCN6-208ENST00000494028 LINC00476Q8WZB0 136 aa6.7□□□□□ -1.34
CLCN6-208ENST00000494028 ERC2-IT1O76042 136 aa6.69□□□□□ -1.34
CLCN6-208ENST00000494028 Q8N377 158 aa6.69□□□□□ -1.34
CLCN6-208ENST00000494028 SPACA4Q8TDM5 124 aa6.69□□□□□ -1.34
CLCN6-208ENST00000494028 UBE2BP63146 152 aa6.68□□□□□ -1.34
CLCN6-208ENST00000494028 ST20-AS1Q8NBB2 130 aa6.68□□□□□ -1.34
CLCN6-208ENST00000494028 DSCR8Q96T75 97 aa6.68□□□□□ -1.34
CLCN6-208ENST00000494028 RTL8CO15255 209 aa6.67□□□□□ -1.34
CLCN6-208ENST00000494028 PDE6GP18545 87 aa6.67□□□□□ -1.34
CLCN6-208ENST00000494028 PRLHP81277 87 aa6.67□□□□□ -1.34
CLCN6-208ENST00000494028 TNP2Q05952 138 aa6.67□□□□□ -1.34
CLCN6-208ENST00000494028 LINC00474Q9P2X8 69 aa6.67□□□□□ -1.34
CLCN6-208ENST00000494028 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.67□□□□□ -1.34
CLCN6-208ENST00000494028 EPM2AB3EWF7 344 aa6.66□□□□□ -1.34
CLCN6-208ENST00000494028 LY6G6CO95867 125 aa6.66□□□□□ -1.34
CLCN6-208ENST00000494028 FAM19A1Q7Z5A9 133 aa6.66□□□□□ -1.34
CLCN6-208ENST00000494028 IMUPQ9GZP8 106 aa6.66□□□□□ -1.34
CLCN6-208ENST00000494028 FUSP35637 526 aaKnown RBP eCLIP6.65□□□□□ -1.34
CLCN6-208ENST00000494028 C1orf134Q5TEV5 83 aa6.65□□□□□ -1.34
CLCN6-208ENST00000494028 ATP5EP2Q5VTU8 51 aa6.65□□□□□ -1.34
CLCN6-208ENST00000494028 C3orf22Q8N5N4 141 aa6.65□□□□□ -1.34
CLCN6-208ENST00000494028 DEFB105AQ8NG35 78 aa6.65□□□□□ -1.34
CLCN6-208ENST00000494028 KRTAP3-3Q9BYR6 98 aa6.65□□□□□ -1.34
CLCN6-208ENST00000494028 KRTAP3-2Q9BYR7 98 aa6.65□□□□□ -1.34
CLCN6-208ENST00000494028 IGKV3D-7A0A0C4DH55 119 aa6.64□□□□□ -1.35
CLCN6-208ENST00000494028 DNAH2Q9P225 4427 aa6.64□□□□□ -1.35
CLCN6-208ENST00000494028 C3orf84H3BNL1 204 aa6.63□□□□□ -1.35
CLCN6-208ENST00000494028 FAM236AA0A1B0GUQ0 79 aa6.62□□□□□ -1.35
CLCN6-208ENST00000494028 FAM236BA0A1B0GV22 79 aa6.62□□□□□ -1.35
CLCN6-208ENST00000494028 H0Y9J4 135 aa6.62□□□□□ -1.35
CLCN6-208ENST00000494028 Q6ZVQ6 151 aa6.62□□□□□ -1.35
CLCN6-208ENST00000494028 SMIM29Q86T20 159 aa6.62□□□□□ -1.35
CLCN6-208ENST00000494028 UBL5Q9BZL1 73 aa6.62□□□□□ -1.35
CLCN6-208ENST00000494028 SACSQ9NZJ4 4579 aa6.61□□□□□ -1.35
CLCN6-208ENST00000494028 KRTAP13-1Q8IUC0 172 aa6.61□□□□□ -1.35
CLCN6-208ENST00000494028 HIGD2AQ9BW72 106 aa6.61□□□□□ -1.35
CLCN6-208ENST00000494028 RYR2Q92736 4967 aa6.6□□□□□ -1.35
CLCN6-208ENST00000494028 KMT2CQ8NEZ4 4911 aaKnown RBP6.6□□□□□ -1.35
CLCN6-208ENST00000494028 IGLV5-52A0A0A0MRZ9 124 aa6.6□□□□□ -1.35
CLCN6-208ENST00000494028 BCE1O60756 84 aa6.6□□□□□ -1.35
CLCN6-208ENST00000494028 HIST1H4AP62805 103 aaKnown RBP6.6□□□□□ -1.35
CLCN6-208ENST00000494028 ANAPC13Q9BS18 74 aa6.6□□□□□ -1.35
CLCN6-208ENST00000494028 KMT2AQ03164 3969 aa6.59□□□□□ -1.35
CLCN6-208ENST00000494028 PLAC8Q9NZF1 115 aa6.59□□□□□ -1.35
CLCN6-208ENST00000494028 SPRR1BP22528 89 aa6.58□□□□□ -1.36
CLCN6-208ENST00000494028 UBE2AP49459 152 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms