RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 HIST1H2BJP06899 126 aa8.47□□□□□ -1.05
COL2A1-207ENST00000490609 HIST1H2BOP23527 126 aa8.47□□□□□ -1.05
COL2A1-207ENST00000490609 HIST1H2BBP33778 126 aa8.47□□□□□ -1.05
COL2A1-207ENST00000490609 HIST1H2BDP58876 126 aa8.47□□□□□ -1.05
COL2A1-207ENST00000490609 HIST1H2BCP62807 126 aa8.47□□□□□ -1.05
COL2A1-207ENST00000490609 HIST2H2BEQ16778 126 aa8.47□□□□□ -1.05
COL2A1-207ENST00000490609 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.47□□□□□ -1.05
COL2A1-207ENST00000490609 ADAMTSL4-AS1Q5T5F5 129 aa8.47□□□□□ -1.05
COL2A1-207ENST00000490609 HIST1H2BHQ93079 126 aa8.47□□□□□ -1.05
COL2A1-207ENST00000490609 HIST1H2BNQ99877 126 aa8.47□□□□□ -1.05
COL2A1-207ENST00000490609 HIST1H2BMQ99879 126 aa8.47□□□□□ -1.05
COL2A1-207ENST00000490609 LEPROTL1O95214 131 aa8.46□□□□□ -1.06
COL2A1-207ENST00000490609 NDUFC2O95298 119 aa8.46□□□□□ -1.06
COL2A1-207ENST00000490609 SPANXB1Q9NS25 103 aaPredicted RBP8.46□□□□□ -1.06
COL2A1-207ENST00000490609 H0Y8G0 127 aa8.45□□□□□ -1.06
COL2A1-207ENST00000490609 J3QQQ9 107 aa8.45□□□□□ -1.06
COL2A1-207ENST00000490609 HSPB8Q9UJY1 196 aa8.44□□□□□ -1.06
COL2A1-207ENST00000490609 TRAV23DV6A0A075B6W5 121 aa8.43□□□□□ -1.06
COL2A1-207ENST00000490609 ZNF73O43830 326 aaPredicted RBP8.43□□□□□ -1.06
COL2A1-207ENST00000490609 PCOTHQ58A44 107 aa8.43□□□□□ -1.06
COL2A1-207ENST00000490609 C9orf153Q5TBE3 101 aa8.43□□□□□ -1.06
COL2A1-207ENST00000490609 PMCHL2Q9BQD1 86 aa8.43□□□□□ -1.06
COL2A1-207ENST00000490609 SPRR1BP22528 89 aa8.42□□□□□ -1.06
COL2A1-207ENST00000490609 LORP23490 312 aaPredicted RBP8.42□□□□□ -1.06
COL2A1-207ENST00000490609 S100A12P80511 92 aa8.42□□□□□ -1.06
COL2A1-207ENST00000490609 S100A7L2Q5SY68 101 aa8.41□□□□□ -1.06
COL2A1-207ENST00000490609 A0A0J9YXY3 114 aa8.4□□□□□ -1.06
COL2A1-207ENST00000490609 FABP4P15090 132 aa8.4□□□□□ -1.06
COL2A1-207ENST00000490609 NPC2P61916 151 aa8.4□□□□□ -1.06
COL2A1-207ENST00000490609 PLNP26678 52 aa8.39□□□□□ -1.07
COL2A1-207ENST00000490609 NMUP48645 174 aa8.39□□□□□ -1.07
COL2A1-207ENST00000490609 JOSD1Q15040 202 aaPredicted RBP8.39□□□□□ -1.07
COL2A1-207ENST00000490609 COA6Q5JTJ3 125 aaKnown RBP8.39□□□□□ -1.07
COL2A1-207ENST00000490609 LITAFQ99732 161 aa8.39□□□□□ -1.07
COL2A1-207ENST00000490609 IGLV8-61A0A075B6I0 122 aa8.38□□□□□ -1.07
COL2A1-207ENST00000490609 C9orf92A6NGG3 77 aa8.38□□□□□ -1.07
COL2A1-207ENST00000490609 C5orf52A6NGY3 159 aa8.38□□□□□ -1.07
COL2A1-207ENST00000490609 DPM2O94777 84 aa8.38□□□□□ -1.07
COL2A1-207ENST00000490609 HRCT1Q6UXD1 115 aa8.38□□□□□ -1.07
COL2A1-207ENST00000490609 KRTAP10-6P60371 365 aaPredicted RBP8.37□□□□□ -1.07
COL2A1-207ENST00000490609 IGKCP01834 107 aa8.36□□□□□ -1.07
COL2A1-207ENST00000490609 LGALS3P17931 250 aaKnown RBP8.36□□□□□ -1.07
COL2A1-207ENST00000490609 MIEN1Q9BRT3 115 aa8.36□□□□□ -1.07
COL2A1-207ENST00000490609 E9PLD3 99 aa8.33□□□□□ -1.08
COL2A1-207ENST00000490609 HERVK_113P61574 105 aa8.33□□□□□ -1.08
COL2A1-207ENST00000490609 LINC00308Q8TCZ7 52 aa8.32□□□□□ -1.08
COL2A1-207ENST00000490609 SYS1-DBNDD2H3BUS1 97 aa8.31□□□□□ -1.08
COL2A1-207ENST00000490609 CFC1BP0CG36 223 aa8.31□□□□□ -1.08
COL2A1-207ENST00000490609 SMIM29Q86T20 159 aa8.31□□□□□ -1.08
COL2A1-207ENST00000490609 LIMD2Q9BT23 127 aa8.3□□□□□ -1.08
COL2A1-207ENST00000490609 SPANXCQ9NY87 97 aa8.3□□□□□ -1.08
COL2A1-207ENST00000490609 A0A0G2JQZ4 141 aa8.29□□□□□ -1.08
COL2A1-207ENST00000490609 S100A6P06703 90 aa8.29□□□□□ -1.08
COL2A1-207ENST00000490609 ELOF1P60002 83 aaKnown RBP8.29□□□□□ -1.08
COL2A1-207ENST00000490609 PET117Q6UWS5 81 aa8.29□□□□□ -1.08
COL2A1-207ENST00000490609 DHRS4-AS1Q9P1J3 65 aa8.29□□□□□ -1.08
COL2A1-207ENST00000490609 CD164Q04900 197 aa8.28□□□□□ -1.08
COL2A1-207ENST00000490609 C1orf195Q5TG92 126 aa8.28□□□□□ -1.08
COL2A1-207ENST00000490609 LINC01545Q5VT33 79 aa8.28□□□□□ -1.08
COL2A1-207ENST00000490609 H7C2G1 150 aa8.27□□□□□ -1.09
COL2A1-207ENST00000490609 Q1RN00 199 aa8.27□□□□□ -1.09
COL2A1-207ENST00000490609 Q5XG85 94 aa8.27□□□□□ -1.09
COL2A1-207ENST00000490609 OR13C6PQ8NH95 151 aa8.27□□□□□ -1.09
COL2A1-207ENST00000490609 TTTY13Q9BZ97 58 aa8.27□□□□□ -1.09
COL2A1-207ENST00000490609 LAMTOR3Q9UHA4 124 aa8.27□□□□□ -1.09
COL2A1-207ENST00000490609 TIMM17BO60830 172 aa8.26□□□□□ -1.09
COL2A1-207ENST00000490609 C3orf79P0CE67 100 aa8.26□□□□□ -1.09
COL2A1-207ENST00000490609 S100A2P29034 98 aa8.26□□□□□ -1.09
COL2A1-207ENST00000490609 HINT1P49773 126 aaPredicted RBP8.26□□□□□ -1.09
COL2A1-207ENST00000490609 HIST3H2BBQ8N257 126 aa8.26□□□□□ -1.09
COL2A1-207ENST00000490609 C20orf202A1L168 122 aa8.25□□□□□ -1.09
COL2A1-207ENST00000490609 KRTDAPP60985 99 aa8.25□□□□□ -1.09
COL2A1-207ENST00000490609 C6orf99Q4VX62 202 aa8.25□□□□□ -1.09
COL2A1-207ENST00000490609 SLC25A34Q6PIV7 304 aa8.25□□□□□ -1.09
COL2A1-207ENST00000490609 SPANXDQ9BXN6 97 aa8.25□□□□□ -1.09
COL2A1-207ENST00000490609 COX7BP24311 80 aa8.24□□□□□ -1.09
COL2A1-207ENST00000490609 DEFB105AQ8NG35 78 aa8.24□□□□□ -1.09
COL2A1-207ENST00000490609 RPL37P61927 97 aaKnown RBP8.23□□□□□ -1.09
COL2A1-207ENST00000490609 HIST1H2BLQ99880 126 aa8.23□□□□□ -1.09
COL2A1-207ENST00000490609 PRO1933Q9H354 126 aa8.23□□□□□ -1.09
COL2A1-207ENST00000490609 CBY1Q9Y3M2 126 aa8.23□□□□□ -1.09
COL2A1-207ENST00000490609 TEX49A0A1B0GTD5 131 aa8.22□□□□□ -1.09
COL2A1-207ENST00000490609 IGLV5-48A0A075B6I7 105 aa8.21□□□□□ -1.1
COL2A1-207ENST00000490609 AKR1D1P51857 326 aa8.21□□□□□ -1.1
COL2A1-207ENST00000490609 TAL2Q16559 108 aa8.21□□□□□ -1.1
COL2A1-207ENST00000490609 SNRPEP62304 92 aaKnown RBP8.2□□□□□ -1.1
COL2A1-207ENST00000490609 USH2AO75445 5202 aa8.2□□□□□ -1.1
COL2A1-207ENST00000490609 TRBV7-6A0A0J9YX20 115 aa8.19□□□□□ -1.1
COL2A1-207ENST00000490609 SSPOA2VEC9 5147 aa8.19□□□□□ -1.1
COL2A1-207ENST00000490609 ZNF815PA8K554 130 aa8.18□□□□□ -1.1
COL2A1-207ENST00000490609 LINC00518Q8N0U6 118 aa8.18□□□□□ -1.1
COL2A1-207ENST00000490609 M0R2T5 61 aa8.15□□□□□ -1.1
COL2A1-207ENST00000490609 A0A1B0GWB2 263 aa8.13□□□□□ -1.11
COL2A1-207ENST00000490609 ATOH7Q8N100 152 aa8.13□□□□□ -1.11
COL2A1-207ENST00000490609 ANKRD39Q53RE8 183 aa8.12□□□□□ -1.11
COL2A1-207ENST00000490609 TMA7Q9Y2S6 64 aaKnown RBP8.12□□□□□ -1.11
COL2A1-207ENST00000490609 COX6B2Q6YFQ2 88 aa8.1□□□□□ -1.11
COL2A1-207ENST00000490609 HSBP1L1C9JCN9 74 aa8.09□□□□□ -1.11
COL2A1-207ENST00000490609 SCGB1D1O95968 90 aa8.09□□□□□ -1.11
COL2A1-207ENST00000490609 MUSTN1Q8IVN3 82 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms