RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 C9orf116Q5BN46 136 aaPredicted RBP7.6□□□□□ -1.19
TRIM40-208ENST00000489892 Q8N814 137 aa7.6□□□□□ -1.19
TRIM40-208ENST00000489892 A0A087WYN8 130 aa7.59□□□□□ -1.19
TRIM40-208ENST00000489892 DNAH10Q8IVF4 4471 aa7.58□□□□□ -1.2
TRIM40-208ENST00000489892 TMEM256-PLSCR3K7ERE1 68 aa7.58□□□□□ -1.2
TRIM40-208ENST00000489892 RPL18AQ02543 176 aaKnown RBP7.58□□□□□ -1.2
TRIM40-208ENST00000489892 S100A7L2Q5SY68 101 aa7.58□□□□□ -1.2
TRIM40-208ENST00000489892 LINC00474Q9P2X8 69 aa7.58□□□□□ -1.2
TRIM40-208ENST00000489892 C22orf24Q9Y442 160 aa7.58□□□□□ -1.2
TRIM40-208ENST00000489892 VPS13DQ5THJ4 4388 aa7.56□□□□□ -1.2
TRIM40-208ENST00000489892 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.56□□□□□ -1.2
TRIM40-208ENST00000489892 SLPIP03973 132 aa7.56□□□□□ -1.2
TRIM40-208ENST00000489892 C9orf163Q8N9P6 203 aa7.56□□□□□ -1.2
TRIM40-208ENST00000489892 KRTAP4-5Q9BYR2 181 aa7.56□□□□□ -1.2
TRIM40-208ENST00000489892 DNAH6Q9C0G6 4158 aa7.56□□□□□ -1.2
TRIM40-208ENST00000489892 C16orf90A8MZG2 172 aa7.55□□□□□ -1.2
TRIM40-208ENST00000489892 GAGE2AQ6NT46 116 aa7.55□□□□□ -1.2
TRIM40-208ENST00000489892 Q6ZRP5 223 aa7.55□□□□□ -1.2
TRIM40-208ENST00000489892 LINC00336Q6ZUF6 198 aa7.55□□□□□ -1.2
TRIM40-208ENST00000489892 ATP5EP2Q5VTU8 51 aa7.54□□□□□ -1.2
TRIM40-208ENST00000489892 Q6JHZ5 121 aa7.54□□□□□ -1.2
TRIM40-208ENST00000489892 XAGE1AQ9HD64 81 aa7.54□□□□□ -1.2
TRIM40-208ENST00000489892 PLA2G2DQ9UNK4 145 aa7.54□□□□□ -1.2
TRIM40-208ENST00000489892 TRBV7-6A0A0J9YX20 115 aa7.53□□□□□ -1.2
TRIM40-208ENST00000489892 NKAPP1Q8N9T2 125 aa7.53□□□□□ -1.2
TRIM40-208ENST00000489892 IGLV5-52A0A0A0MRZ9 124 aa7.52□□□□□ -1.21
TRIM40-208ENST00000489892 IGLV6-57P01721 117 aa7.52□□□□□ -1.21
TRIM40-208ENST00000489892 M0R378 163 aa7.51□□□□□ -1.21
TRIM40-208ENST00000489892 RTL8CO15255 209 aa7.51□□□□□ -1.21
TRIM40-208ENST00000489892 CCKP06307 115 aa7.51□□□□□ -1.21
TRIM40-208ENST00000489892 LINC00575Q6W349 94 aa7.51□□□□□ -1.21
TRIM40-208ENST00000489892 IGLV5-37A0A075B6J1 123 aa7.5□□□□□ -1.21
TRIM40-208ENST00000489892 hADV29S1A0JD25 119 aa7.5□□□□□ -1.21
TRIM40-208ENST00000489892 NCR3O14931 201 aa7.5□□□□□ -1.21
TRIM40-208ENST00000489892 VPREB1P12018 145 aa7.5□□□□□ -1.21
TRIM40-208ENST00000489892 PDE6GP18545 87 aa7.5□□□□□ -1.21
TRIM40-208ENST00000489892 TNP2Q05952 138 aa7.5□□□□□ -1.21
TRIM40-208ENST00000489892 C6orf99Q4VX62 202 aa7.5□□□□□ -1.21
TRIM40-208ENST00000489892 SMCR5Q8TEV8 140 aa7.5□□□□□ -1.21
TRIM40-208ENST00000489892 C14orf132Q9NPU4 83 aa7.5□□□□□ -1.21
TRIM40-208ENST00000489892 PKHD1P08F94 4074 aa7.5□□□□□ -1.21
TRIM40-208ENST00000489892 C9orf129Q5T035 196 aaKnown RBP7.49□□□□□ -1.21
TRIM40-208ENST00000489892 DIRC1Q969H9 104 aa7.49□□□□□ -1.21
TRIM40-208ENST00000489892 TRAV23DV6A0A075B6W5 121 aa7.48□□□□□ -1.21
TRIM40-208ENST00000489892 A0A096LNI7 61 aa7.48□□□□□ -1.21
TRIM40-208ENST00000489892 FAM236AA0A1B0GUQ0 79 aa7.48□□□□□ -1.21
TRIM40-208ENST00000489892 FAM236BA0A1B0GV22 79 aa7.48□□□□□ -1.21
TRIM40-208ENST00000489892 ATOX1O00244 68 aa7.48□□□□□ -1.21
TRIM40-208ENST00000489892 LOC110117498A0A087WWA1 95 aa7.47□□□□□ -1.21
TRIM40-208ENST00000489892 IGKV2-24A0A0C4DH68 120 aa7.47□□□□□ -1.21
TRIM40-208ENST00000489892 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.47□□□□□ -1.21
TRIM40-208ENST00000489892 TRBV10-3A0A0K0K1G6 114 aa7.46□□□□□ -1.22
TRIM40-208ENST00000489892 HIST1H4AP62805 103 aaKnown RBP7.45□□□□□ -1.22
TRIM40-208ENST00000489892 UQCRQO14949 82 aa7.44□□□□□ -1.22
TRIM40-208ENST00000489892 COX7BP24311 80 aa7.44□□□□□ -1.22
TRIM40-208ENST00000489892 PRR3P79522 188 aaKnown RBP7.44□□□□□ -1.22
TRIM40-208ENST00000489892 RBM3P98179 157 aaKnown RBP7.44□□□□□ -1.22
TRIM40-208ENST00000489892 FAM19A5Q7Z5A7 132 aaPredicted RBP7.44□□□□□ -1.22
TRIM40-208ENST00000489892 MRPL55Q7Z7F7 128 aaKnown RBP7.44□□□□□ -1.22
TRIM40-208ENST00000489892 DPH3Q96FX2 82 aa7.44□□□□□ -1.22
TRIM40-208ENST00000489892 UBL5Q9BZL1 73 aa7.44□□□□□ -1.22
TRIM40-208ENST00000489892 ELOF1P60002 83 aaKnown RBP7.43□□□□□ -1.22
TRIM40-208ENST00000489892 SERTAD4-AS1Q5TG53 156 aa7.43□□□□□ -1.22
TRIM40-208ENST00000489892 SPACA4Q8TDM5 124 aa7.43□□□□□ -1.22
TRIM40-208ENST00000489892 LINC00846Q9NV44 126 aa7.43□□□□□ -1.22
TRIM40-208ENST00000489892 FAT2Q9NYQ8 4349 aa7.42□□□□□ -1.22
TRIM40-208ENST00000489892 PRYO14603 147 aa7.42□□□□□ -1.22
TRIM40-208ENST00000489892 ZNF73O43830 326 aaPredicted RBP7.42□□□□□ -1.22
TRIM40-208ENST00000489892 Q8NDZ9 215 aa7.42□□□□□ -1.22
TRIM40-208ENST00000489892 C7orf33Q8WU49 177 aa7.42□□□□□ -1.22
TRIM40-208ENST00000489892 A0A1B0GVY2 172 aa7.41□□□□□ -1.22
TRIM40-208ENST00000489892 DSCR8Q96T75 97 aa7.41□□□□□ -1.22
TRIM40-208ENST00000489892 KCNQ1DNQ9H478 68 aa7.41□□□□□ -1.22
TRIM40-208ENST00000489892 DNAH2Q9P225 4427 aa7.41□□□□□ -1.22
TRIM40-208ENST00000489892 FAM168BA1KXE4 195 aa7.4□□□□□ -1.22
TRIM40-208ENST00000489892 B5MCH6 92 aa7.4□□□□□ -1.22
TRIM40-208ENST00000489892 CCDC179H3BU77 68 aa7.4□□□□□ -1.22
TRIM40-208ENST00000489892 BCE1O60756 84 aa7.4□□□□□ -1.22
TRIM40-208ENST00000489892 Q6ZQT0 140 aa7.4□□□□□ -1.22
TRIM40-208ENST00000489892 C3orf22Q8N5N4 141 aa7.4□□□□□ -1.22
TRIM40-208ENST00000489892 LAMTOR3Q9UHA4 124 aa7.4□□□□□ -1.22
TRIM40-208ENST00000489892 DNAH17Q9UFH2 4485 aa7.4□□□□□ -1.23
TRIM40-208ENST00000489892 CHTF8P0CG12 524 aa7.39□□□□□ -1.23
TRIM40-208ENST00000489892 COX7CP15954 63 aa7.39□□□□□ -1.23
TRIM40-208ENST00000489892 Q6ZQY7 126 aa7.39□□□□□ -1.23
TRIM40-208ENST00000489892 IGLV1-50A0A075B6I6 118 aa7.38□□□□□ -1.23
TRIM40-208ENST00000489892 EPM2AB3EWF7 344 aa7.38□□□□□ -1.23
TRIM40-208ENST00000489892 KRTAP10-2P60368 255 aa7.38□□□□□ -1.23
TRIM40-208ENST00000489892 UBE2BP63146 152 aa7.38□□□□□ -1.23
TRIM40-208ENST00000489892 PLAC8Q9NZF1 115 aa7.38□□□□□ -1.23
TRIM40-208ENST00000489892 PKD1P98161 4303 aa7.38□□□□□ -1.23
TRIM40-208ENST00000489892 A0A1W2PNN7 141 aa7.37□□□□□ -1.23
TRIM40-208ENST00000489892 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.37□□□□□ -1.23
TRIM40-208ENST00000489892 ETDCA0A1B0GVM5 59 aa7.36□□□□□ -1.23
TRIM40-208ENST00000489892 C9orf153Q5TBE3 101 aa7.36□□□□□ -1.23
TRIM40-208ENST00000489892 LINC00528Q8N1L1 170 aa7.36□□□□□ -1.23
TRIM40-208ENST00000489892 TRBV7-4A0A0J9YYF1 115 aa7.35□□□□□ -1.23
TRIM40-208ENST00000489892 RPL37AP8A6NKH3 93 aa7.35□□□□□ -1.23
TRIM40-208ENST00000489892 CRYGAP11844 174 aa7.35□□□□□ -1.23
TRIM40-208ENST00000489892 REG3GQ6UW15 175 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms