RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 IGLV1-50A0A075B6I6 118 aa10.29□□□□□ -0.76
RAPGEF3-211ENST00000488250 FAM168BA1KXE4 195 aa10.29□□□□□ -0.76
RAPGEF3-211ENST00000488250 PRYO14603 147 aa10.29□□□□□ -0.76
RAPGEF3-211ENST00000488250 PSCAO43653 123 aa10.29□□□□□ -0.76
RAPGEF3-211ENST00000488250 C14orf177Q52M58 125 aa10.29□□□□□ -0.76
RAPGEF3-211ENST00000488250 LAMTOR3Q9UHA4 124 aa10.29□□□□□ -0.76
RAPGEF3-211ENST00000488250 A0A1B0GV72 72 aa10.28□□□□□ -0.76
RAPGEF3-211ENST00000488250 SPRR1AP35321 89 aa10.28□□□□□ -0.76
RAPGEF3-211ENST00000488250 KRTAP4-16G5E9R7 235 aaPredicted RBP10.27□□□□□ -0.77
RAPGEF3-211ENST00000488250 PDE6GP18545 87 aa10.27□□□□□ -0.77
RAPGEF3-211ENST00000488250 Q6ZQT0 140 aa10.27□□□□□ -0.77
RAPGEF3-211ENST00000488250 NBDYA0A0U1RRE5 68 aa10.25□□□□□ -0.77
RAPGEF3-211ENST00000488250 NDUFV3P56181 108 aaKnown RBP10.25□□□□□ -0.77
RAPGEF3-211ENST00000488250 MRPL55Q7Z7F7 128 aaKnown RBP10.25□□□□□ -0.77
RAPGEF3-211ENST00000488250 C16orf90A8MZG2 172 aa10.25□□□□□ -0.77
RAPGEF3-211ENST00000488250 Q6JHZ5 121 aa10.24□□□□□ -0.77
RAPGEF3-211ENST00000488250 CSMD3Q7Z407 3707 aa10.24□□□□□ -0.77
RAPGEF3-211ENST00000488250 Q6ZRX8 168 aa10.23□□□□□ -0.77
RAPGEF3-211ENST00000488250 DSCR8Q96T75 97 aa10.23□□□□□ -0.77
RAPGEF3-211ENST00000488250 DHRS4-AS1Q9P1J3 65 aa10.23□□□□□ -0.77
RAPGEF3-211ENST00000488250 B5MCH6 92 aa10.23□□□□□ -0.77
RAPGEF3-211ENST00000488250 FAM19A5Q7Z5A7 132 aaPredicted RBP10.23□□□□□ -0.77
RAPGEF3-211ENST00000488250 TGP01266 2768 aa10.23□□□□□ -0.77
RAPGEF3-211ENST00000488250 RPL37AP8A6NKH3 93 aa10.22□□□□□ -0.77
RAPGEF3-211ENST00000488250 TRBV7-4A0A0J9YYF1 115 aa10.21□□□□□ -0.77
RAPGEF3-211ENST00000488250 LYSTQ99698 3801 aa10.21□□□□□ -0.77
RAPGEF3-211ENST00000488250 ANAPC13Q9BS18 74 aa10.21□□□□□ -0.77
RAPGEF3-211ENST00000488250 A0A096LNI7 61 aa10.21□□□□□ -0.78
RAPGEF3-211ENST00000488250 LRCOL1A6NCL2 159 aa10.21□□□□□ -0.78
RAPGEF3-211ENST00000488250 DNAH7Q8WXX0 4024 aa10.2□□□□□ -0.78
RAPGEF3-211ENST00000488250 Q6ZRN7 208 aaPredicted RBP10.2□□□□□ -0.78
RAPGEF3-211ENST00000488250 ETDCA0A1B0GVM5 59 aa10.19□□□□□ -0.78
RAPGEF3-211ENST00000488250 PLECQ15149 4684 aaKnown RBP10.19□□□□□ -0.78
RAPGEF3-211ENST00000488250 PKIGQ9Y2B9 76 aa10.18□□□□□ -0.78
RAPGEF3-211ENST00000488250 ATP5EP2Q5VTU8 51 aa10.17□□□□□ -0.78
RAPGEF3-211ENST00000488250 Q9BRP9 147 aa10.17□□□□□ -0.78
RAPGEF3-211ENST00000488250 TENM2Q9NT68 2774 aa10.17□□□□□ -0.78
RAPGEF3-211ENST00000488250 DNAH10Q8IVF4 4471 aa10.17□□□□□ -0.78
RAPGEF3-211ENST00000488250 C9orf163Q8N9P6 203 aa10.16□□□□□ -0.78
RAPGEF3-211ENST00000488250 UBL5Q9BZL1 73 aa10.16□□□□□ -0.78
RAPGEF3-211ENST00000488250 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.15□□□□□ -0.78
RAPGEF3-211ENST00000488250 A0A1W2PNN7 141 aa10.15□□□□□ -0.78
RAPGEF3-211ENST00000488250 LINC01547P58512 204 aaPredicted RBP10.15□□□□□ -0.78
RAPGEF3-211ENST00000488250 REG3GQ6UW15 175 aa10.15□□□□□ -0.78
RAPGEF3-211ENST00000488250 Q8N377 158 aa10.15□□□□□ -0.79
RAPGEF3-211ENST00000488250 IGKV2-24A0A0C4DH68 120 aa10.14□□□□□ -0.79
RAPGEF3-211ENST00000488250 FAM236AA0A1B0GUQ0 79 aa10.14□□□□□ -0.79
RAPGEF3-211ENST00000488250 FAM236BA0A1B0GV22 79 aa10.14□□□□□ -0.79
RAPGEF3-211ENST00000488250 IGLV5-48A0A075B6I7 105 aa10.13□□□□□ -0.79
RAPGEF3-211ENST00000488250 IGKV3D-7A0A0C4DH55 119 aa10.13□□□□□ -0.79
RAPGEF3-211ENST00000488250 M0R2N4 97 aa10.13□□□□□ -0.79
RAPGEF3-211ENST00000488250 VPS13DQ5THJ4 4388 aa10.12□□□□□ -0.79
RAPGEF3-211ENST00000488250 HIST1H4AP62805 103 aaKnown RBP10.11□□□□□ -0.79
RAPGEF3-211ENST00000488250 DEFB105AQ8NG35 78 aa10.09□□□□□ -0.79
RAPGEF3-211ENST00000488250 LINC00474Q9P2X8 69 aa10.09□□□□□ -0.79
RAPGEF3-211ENST00000488250 STARD9Q9P2P6 4700 aa10.08□□□□□ -0.8
RAPGEF3-211ENST00000488250 UBE2BP63146 152 aa10.08□□□□□ -0.8
RAPGEF3-211ENST00000488250 Q6ZVQ6 151 aa10.08□□□□□ -0.8
RAPGEF3-211ENST00000488250 ERC2-IT1O76042 136 aa10.07□□□□□ -0.8
RAPGEF3-211ENST00000488250 Q6ZR54 194 aa10.07□□□□□ -0.8
RAPGEF3-211ENST00000488250 CHTF8P0CG12 524 aa10.07□□□□□ -0.8
RAPGEF3-211ENST00000488250 TNP2Q05952 138 aa10.07□□□□□ -0.8
RAPGEF3-211ENST00000488250 ST20-AS1Q8NBB2 130 aa10.07□□□□□ -0.8
RAPGEF3-211ENST00000488250 SVIPQ8NHG7 77 aa10.05□□□□□ -0.8
RAPGEF3-211ENST00000488250 A0A087WTM6 91 aa10.04□□□□□ -0.8
RAPGEF3-211ENST00000488250 A0A1B0GW54 56 aa10.03□□□□□ -0.8
RAPGEF3-211ENST00000488250 CXCL6P80162 114 aa10.03□□□□□ -0.8
RAPGEF3-211ENST00000488250 H0Y9J4 135 aa10.03□□□□□ -0.8
RAPGEF3-211ENST00000488250 ATOX1O00244 68 aa10.03□□□□□ -0.8
RAPGEF3-211ENST00000488250 PHF5AQ7RTV0 110 aaKnown RBP10.03□□□□□ -0.8
RAPGEF3-211ENST00000488250 FAM19A1Q7Z5A9 133 aa10.03□□□□□ -0.8
RAPGEF3-211ENST00000488250 A0A087WVE0 104 aa10.02□□□□□ -0.81
RAPGEF3-211ENST00000488250 EPM2AB3EWF7 344 aa10.02□□□□□ -0.81
RAPGEF3-211ENST00000488250 C3orf22Q8N5N4 141 aa10.01□□□□□ -0.81
RAPGEF3-211ENST00000488250 CCDC179H3BU77 68 aa10.01□□□□□ -0.81
RAPGEF3-211ENST00000488250 SMIM29Q86T20 159 aa10□□□□□ -0.81
RAPGEF3-211ENST00000488250 KRTAP11-1Q8IUC1 163 aa10□□□□□ -0.81
RAPGEF3-211ENST00000488250 HAMPP81172 84 aa9.99□□□□□ -0.81
RAPGEF3-211ENST00000488250 PRLHP81277 87 aa9.99□□□□□ -0.81
RAPGEF3-211ENST00000488250 SPACA4Q8TDM5 124 aa9.99□□□□□ -0.81
RAPGEF3-211ENST00000488250 PANO1I0J062 215 aa9.98□□□□□ -0.81
RAPGEF3-211ENST00000488250 C1orf137Q5JT78 98 aa9.98□□□□□ -0.81
RAPGEF3-211ENST00000488250 FUSP35637 526 aaKnown RBP eCLIP9.97□□□□□ -0.81
RAPGEF3-211ENST00000488250 A0A1W2PNM2 257 aa9.95□□□□□ -0.82
RAPGEF3-211ENST00000488250 Q8NBF4 154 aa9.95□□□□□ -0.82
RAPGEF3-211ENST00000488250 HIGD2AQ9BW72 106 aa9.95□□□□□ -0.82
RAPGEF3-211ENST00000488250 WWC2-AS2Q96NR7 200 aa9.95□□□□□ -0.82
RAPGEF3-211ENST00000488250 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.95□□□□□ -0.82
RAPGEF3-211ENST00000488250 UQCRQO14949 82 aa9.94□□□□□ -0.82
RAPGEF3-211ENST00000488250 SPRR4Q96PI1 79 aa9.94□□□□□ -0.82
RAPGEF3-211ENST00000488250 IGLV8-61A0A075B6I0 122 aa9.94□□□□□ -0.82
RAPGEF3-211ENST00000488250 RTL8CO15255 209 aa9.94□□□□□ -0.82
RAPGEF3-211ENST00000488250 SPRR1BP22528 89 aa9.94□□□□□ -0.82
RAPGEF3-211ENST00000488250 NREPQ16612 68 aa9.94□□□□□ -0.82
RAPGEF3-211ENST00000488250 C1orf134Q5TEV5 83 aa9.94□□□□□ -0.82
RAPGEF3-211ENST00000488250 F8WEM9 126 aa9.93□□□□□ -0.82
RAPGEF3-211ENST00000488250 BCE1O60756 84 aa9.93□□□□□ -0.82
RAPGEF3-211ENST00000488250 COX7CP15954 63 aa9.93□□□□□ -0.82
RAPGEF3-211ENST00000488250 KRTAP13-1Q8IUC0 172 aa9.92□□□□□ -0.82
RAPGEF3-211ENST00000488250 C3orf84H3BNL1 204 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms