RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 C9orf153Q5TBE3 101 aa10.67□□□□□ -0.7
COL27A1-205ENST00000485397 SOSTDC1Q6X4U4 206 aa10.67□□□□□ -0.7
COL27A1-205ENST00000485397 TRAV23DV6A0A075B6W5 121 aa10.66□□□□□ -0.7
COL27A1-205ENST00000485397 EIF4EBP3O60516 100 aaPredicted RBP10.66□□□□□ -0.7
COL27A1-205ENST00000485397 DPM2O94777 84 aa10.66□□□□□ -0.7
COL27A1-205ENST00000485397 FABP4P15090 132 aa10.66□□□□□ -0.7
COL27A1-205ENST00000485397 NMUP48645 174 aa10.66□□□□□ -0.7
COL27A1-205ENST00000485397 NPC2P61916 151 aa10.66□□□□□ -0.7
COL27A1-205ENST00000485397 ST20-AS1Q8NBB2 130 aa10.66□□□□□ -0.7
COL27A1-205ENST00000485397 XP32Q5T750 250 aa10.65□□□□□ -0.7
COL27A1-205ENST00000485397 JOSD1Q15040 202 aaPredicted RBP10.64□□□□□ -0.71
COL27A1-205ENST00000485397 ADAMTSL4-AS1Q5T5F5 129 aa10.64□□□□□ -0.71
COL27A1-205ENST00000485397 HSPB8Q9UJY1 196 aa10.64□□□□□ -0.71
COL27A1-205ENST00000485397 ZNF73O43830 326 aaPredicted RBP10.63□□□□□ -0.71
COL27A1-205ENST00000485397 IGKCP01834 107 aa10.63□□□□□ -0.71
COL27A1-205ENST00000485397 A0A0J9YXY3 114 aa10.61□□□□□ -0.71
COL27A1-205ENST00000485397 E9PLD3 99 aa10.56□□□□□ -0.72
COL27A1-205ENST00000485397 LCE2DQ5TA82 110 aaPredicted RBP10.56□□□□□ -0.72
COL27A1-205ENST00000485397 C5orf52A6NGY3 159 aa10.55□□□□□ -0.72
COL27A1-205ENST00000485397 HINT1P49773 126 aaPredicted RBP10.55□□□□□ -0.72
COL27A1-205ENST00000485397 HRCT1Q6UXD1 115 aa10.55□□□□□ -0.72
COL27A1-205ENST00000485397 LCE2CQ5TA81 110 aa10.54□□□□□ -0.72
COL27A1-205ENST00000485397 SPRR1BP22528 89 aa10.53□□□□□ -0.72
COL27A1-205ENST00000485397 OR13C6PQ8NH95 151 aa10.53□□□□□ -0.72
COL27A1-205ENST00000485397 HIST1H2BKO60814 126 aa10.52□□□□□ -0.73
COL27A1-205ENST00000485397 HIST1H2BJP06899 126 aa10.52□□□□□ -0.73
COL27A1-205ENST00000485397 HIST1H2BOP23527 126 aa10.52□□□□□ -0.73
COL27A1-205ENST00000485397 HIST1H2BBP33778 126 aa10.52□□□□□ -0.73
COL27A1-205ENST00000485397 HIST1H2BDP58876 126 aa10.52□□□□□ -0.73
COL27A1-205ENST00000485397 HIST1H2BCP62807 126 aa10.52□□□□□ -0.73
COL27A1-205ENST00000485397 HIST2H2BEQ16778 126 aa10.52□□□□□ -0.73
COL27A1-205ENST00000485397 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.52□□□□□ -0.73
COL27A1-205ENST00000485397 LINC00308Q8TCZ7 52 aa10.52□□□□□ -0.73
COL27A1-205ENST00000485397 HIST1H2BHQ93079 126 aa10.52□□□□□ -0.73
COL27A1-205ENST00000485397 LITAFQ99732 161 aa10.52□□□□□ -0.73
COL27A1-205ENST00000485397 HIST1H2BNQ99877 126 aa10.52□□□□□ -0.73
COL27A1-205ENST00000485397 HIST1H2BMQ99879 126 aa10.52□□□□□ -0.73
COL27A1-205ENST00000485397 CBY1Q9Y3M2 126 aa10.52□□□□□ -0.73
COL27A1-205ENST00000485397 SPANXCQ9NY87 97 aa10.51□□□□□ -0.73
COL27A1-205ENST00000485397 C9orf92A6NGG3 77 aa10.49□□□□□ -0.73
COL27A1-205ENST00000485397 KRTAP19-2Q3LHN2 52 aa10.49□□□□□ -0.73
COL27A1-205ENST00000485397 PCOTHQ58A44 107 aa10.49□□□□□ -0.73
COL27A1-205ENST00000485397 LIMD2Q9BT23 127 aa10.49□□□□□ -0.73
COL27A1-205ENST00000485397 DHRS4-AS1Q9P1J3 65 aa10.49□□□□□ -0.73
COL27A1-205ENST00000485397 SLC25A34Q6PIV7 304 aa10.48□□□□□ -0.73
COL27A1-205ENST00000485397 LAMTOR3Q9UHA4 124 aa10.48□□□□□ -0.73
COL27A1-205ENST00000485397 SYS1-DBNDD2H3BUS1 97 aa10.46□□□□□ -0.73
COL27A1-205ENST00000485397 TIMM17BO60830 172 aa10.46□□□□□ -0.73
COL27A1-205ENST00000485397 SPANXDQ9BXN6 97 aa10.46□□□□□ -0.73
COL27A1-205ENST00000485397 IGLV8-61A0A075B6I0 122 aa10.45□□□□□ -0.74
COL27A1-205ENST00000485397 COX7BP24311 80 aa10.45□□□□□ -0.74
COL27A1-205ENST00000485397 ELOF1P60002 83 aaKnown RBP10.44□□□□□ -0.74
COL27A1-205ENST00000485397 TTTY13Q9BZ97 58 aa10.44□□□□□ -0.74
COL27A1-205ENST00000485397 S100A6P06703 90 aa10.43□□□□□ -0.74
COL27A1-205ENST00000485397 TAL2Q16559 108 aa10.43□□□□□ -0.74
COL27A1-205ENST00000485397 Q1RN00 199 aa10.43□□□□□ -0.74
COL27A1-205ENST00000485397 C6orf99Q4VX62 202 aa10.43□□□□□ -0.74
COL27A1-205ENST00000485397 COA6Q5JTJ3 125 aaKnown RBP10.43□□□□□ -0.74
COL27A1-205ENST00000485397 DEFB105AQ8NG35 78 aa10.43□□□□□ -0.74
COL27A1-205ENST00000485397 ZNF815PA8K554 130 aa10.42□□□□□ -0.74
COL27A1-205ENST00000485397 MT1HP80294 61 aa10.42□□□□□ -0.74
COL27A1-205ENST00000485397 CRCT1Q9UGL9 99 aa10.42□□□□□ -0.74
COL27A1-205ENST00000485397 LINC01545Q5VT33 79 aa10.41□□□□□ -0.74
COL27A1-205ENST00000485397 LINC00518Q8N0U6 118 aa10.4□□□□□ -0.74
COL27A1-205ENST00000485397 FSIP2Q5CZC0 6907 aa10.4□□□□□ -0.75
COL27A1-205ENST00000485397 H7C2G1 150 aa10.39□□□□□ -0.75
COL27A1-205ENST00000485397 CD164Q04900 197 aa10.39□□□□□ -0.75
COL27A1-205ENST00000485397 PRO1933Q9H354 126 aa10.39□□□□□ -0.75
COL27A1-205ENST00000485397 TEX49A0A1B0GTD5 131 aa10.38□□□□□ -0.75
COL27A1-205ENST00000485397 S100A2P29034 98 aa10.37□□□□□ -0.75
COL27A1-205ENST00000485397 PET117Q6UWS5 81 aa10.37□□□□□ -0.75
COL27A1-205ENST00000485397 SMIM29Q86T20 159 aa10.37□□□□□ -0.75
COL27A1-205ENST00000485397 A0A0G2JQZ4 141 aa10.35□□□□□ -0.75
COL27A1-205ENST00000485397 AKR1D1P51857 326 aa10.33□□□□□ -0.76
COL27A1-205ENST00000485397 C1orf195Q5TG92 126 aa10.33□□□□□ -0.76
COL27A1-205ENST00000485397 Q5XG85 94 aa10.33□□□□□ -0.76
COL27A1-205ENST00000485397 TRBV7-6A0A0J9YX20 115 aa10.32□□□□□ -0.76
COL27A1-205ENST00000485397 C3orf79P0CE67 100 aa10.32□□□□□ -0.76
COL27A1-205ENST00000485397 C20orf202A1L168 122 aa10.31□□□□□ -0.76
COL27A1-205ENST00000485397 CFC1BP0CG36 223 aa10.31□□□□□ -0.76
COL27A1-205ENST00000485397 IGLV5-48A0A075B6I7 105 aa10.3□□□□□ -0.76
COL27A1-205ENST00000485397 A0A1B0GWB2 263 aa10.3□□□□□ -0.76
COL27A1-205ENST00000485397 KRTDAPP60985 99 aa10.3□□□□□ -0.76
COL27A1-205ENST00000485397 SCGB1D4Q6XE38 83 aa10.3□□□□□ -0.76
COL27A1-205ENST00000485397 A6NDN8 102 aa10.29□□□□□ -0.76
COL27A1-205ENST00000485397 LORP23490 312 aaPredicted RBP10.27□□□□□ -0.77
COL27A1-205ENST00000485397 ANKRD39Q53RE8 183 aa10.27□□□□□ -0.77
COL27A1-205ENST00000485397 HIST3H2BBQ8N257 126 aa10.27□□□□□ -0.77
COL27A1-205ENST00000485397 IFITM1P13164 125 aa10.26□□□□□ -0.77
COL27A1-205ENST00000485397 KRTAP10-6P60371 365 aaPredicted RBP10.26□□□□□ -0.77
COL27A1-205ENST00000485397 RPL37P61927 97 aaKnown RBP10.26□□□□□ -0.77
COL27A1-205ENST00000485397 SNRPEP62304 92 aaKnown RBP10.25□□□□□ -0.77
COL27A1-205ENST00000485397 MUSTN1Q8IVN3 82 aa10.25□□□□□ -0.77
COL27A1-205ENST00000485397 COPS9Q8WXC6 57 aa10.24□□□□□ -0.77
COL27A1-205ENST00000485397 HIST1H2BLQ99880 126 aa10.24□□□□□ -0.77
COL27A1-205ENST00000485397 A4D1N5 150 aa10.21□□□□□ -0.77
COL27A1-205ENST00000485397 Q6ZVH6 145 aa10.21□□□□□ -0.77
COL27A1-205ENST00000485397 PCP2Q8IVA1 136 aa10.21□□□□□ -0.77
COL27A1-205ENST00000485397 ATOH7Q8N100 152 aa10.21□□□□□ -0.77
COL27A1-205ENST00000485397 SMIM11BQ8TCY0 68 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms