RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 GAGE2AQ6NT46 116 aa10.18□□□□□ -0.78
RXRA-202ENST00000481739 C7orf33Q8WU49 177 aa10.18□□□□□ -0.78
RXRA-202ENST00000481739 C14orf132Q9NPU4 83 aa10.18□□□□□ -0.78
RXRA-202ENST00000481739 SDIM1Q6ZPB5 146 aa10.17□□□□□ -0.78
RXRA-202ENST00000481739 LINC00528Q8N1L1 170 aa10.17□□□□□ -0.78
RXRA-202ENST00000481739 PRYO14603 147 aa10.17□□□□□ -0.78
RXRA-202ENST00000481739 Q6Q795 121 aa10.17□□□□□ -0.78
RXRA-202ENST00000481739 Q6ZQY7 126 aa10.17□□□□□ -0.78
RXRA-202ENST00000481739 GAGE2BQ13066 116 aa10.16□□□□□ -0.78
RXRA-202ENST00000481739 LINC00643Q86TS7 51 aa10.15□□□□□ -0.78
RXRA-202ENST00000481739 C21orf62-AS1Q17RA5 79 aa10.14□□□□□ -0.79
RXRA-202ENST00000481739 DNAH6Q9C0G6 4158 aa10.14□□□□□ -0.79
RXRA-202ENST00000481739 KMT2AQ03164 3969 aa10.14□□□□□ -0.79
RXRA-202ENST00000481739 C16orf90A8MZG2 172 aa10.14□□□□□ -0.79
RXRA-202ENST00000481739 CCKP06307 115 aa10.13□□□□□ -0.79
RXRA-202ENST00000481739 PDE6GP18545 87 aa10.13□□□□□ -0.79
RXRA-202ENST00000481739 Q6ZR54 194 aa10.13□□□□□ -0.79
RXRA-202ENST00000481739 IGLV1-50A0A075B6I6 118 aa10.12□□□□□ -0.79
RXRA-202ENST00000481739 MRPL55Q7Z7F7 128 aaKnown RBP10.12□□□□□ -0.79
RXRA-202ENST00000481739 RBM3P98179 157 aaKnown RBP10.12□□□□□ -0.79
RXRA-202ENST00000481739 IMUPQ9GZP8 106 aa10.12□□□□□ -0.79
RXRA-202ENST00000481739 LAMTOR3Q9UHA4 124 aa10.12□□□□□ -0.79
RXRA-202ENST00000481739 SPRR1AP35321 89 aa10.11□□□□□ -0.79
RXRA-202ENST00000481739 DHRS4-AS1Q9P1J3 65 aa10.11□□□□□ -0.79
RXRA-202ENST00000481739 LOC110117498A0A087WWA1 95 aa10.1□□□□□ -0.79
RXRA-202ENST00000481739 TRBV7-7A0A0K0K1E9 115 aa10.1□□□□□ -0.79
RXRA-202ENST00000481739 Q6ZRN7 208 aaPredicted RBP10.1□□□□□ -0.79
RXRA-202ENST00000481739 DNAH2Q9P225 4427 aa10.1□□□□□ -0.79
RXRA-202ENST00000481739 C1orf134Q5TEV5 83 aa10.1□□□□□ -0.79
RXRA-202ENST00000481739 FAM168BA1KXE4 195 aa10.09□□□□□ -0.79
RXRA-202ENST00000481739 Q6ZRX8 168 aa10.08□□□□□ -0.8
RXRA-202ENST00000481739 LRCOL1A6NCL2 159 aa10.07□□□□□ -0.8
RXRA-202ENST00000481739 KRTAP4-16G5E9R7 235 aaPredicted RBP10.07□□□□□ -0.8
RXRA-202ENST00000481739 FAM19A5Q7Z5A7 132 aaPredicted RBP10.07□□□□□ -0.8
RXRA-202ENST00000481739 KRTAP7-1Q8IUC3 87 aa10.07□□□□□ -0.8
RXRA-202ENST00000481739 DSCR8Q96T75 97 aa10.07□□□□□ -0.8
RXRA-202ENST00000481739 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.07□□□□□ -0.8
RXRA-202ENST00000481739 ETDCA0A1B0GVM5 59 aa10.07□□□□□ -0.8
RXRA-202ENST00000481739 SMCR5Q8TEV8 140 aa10.07□□□□□ -0.8
RXRA-202ENST00000481739 A0A096LNI7 61 aa10.06□□□□□ -0.8
RXRA-202ENST00000481739 B5MCH6 92 aa10.05□□□□□ -0.8
RXRA-202ENST00000481739 Q6ZQT0 140 aa10.05□□□□□ -0.8
RXRA-202ENST00000481739 C9orf163Q8N9P6 203 aa10.05□□□□□ -0.8
RXRA-202ENST00000481739 RPL37AP8A6NKH3 93 aa10.05□□□□□ -0.8
RXRA-202ENST00000481739 LINC00474Q9P2X8 69 aa10.05□□□□□ -0.8
RXRA-202ENST00000481739 LINC00846Q9NV44 126 aa10.04□□□□□ -0.8
RXRA-202ENST00000481739 A0A1B0GV72 72 aa10.03□□□□□ -0.8
RXRA-202ENST00000481739 NDUFV3P56181 108 aaKnown RBP10.03□□□□□ -0.8
RXRA-202ENST00000481739 REG3GQ6UW15 175 aa10.03□□□□□ -0.8
RXRA-202ENST00000481739 HYDINQ4G0P3 5121 aa10.03□□□□□ -0.8
RXRA-202ENST00000481739 Q6JHZ5 121 aa10.02□□□□□ -0.81
RXRA-202ENST00000481739 A0A087WTM6 91 aa10.01□□□□□ -0.81
RXRA-202ENST00000481739 IGKV2-24A0A0C4DH68 120 aa10.01□□□□□ -0.81
RXRA-202ENST00000481739 TRBV7-4A0A0J9YYF1 115 aa10.01□□□□□ -0.81
RXRA-202ENST00000481739 ATP5EP2Q5VTU8 51 aa10.01□□□□□ -0.81
RXRA-202ENST00000481739 UBL5Q9BZL1 73 aa9.99□□□□□ -0.81
RXRA-202ENST00000481739 DNAH17Q9UFH2 4485 aa9.99□□□□□ -0.81
RXRA-202ENST00000481739 SACSQ9NZJ4 4579 aa9.99□□□□□ -0.81
RXRA-202ENST00000481739 Q9BRP9 147 aa9.98□□□□□ -0.81
RXRA-202ENST00000481739 IGLV5-48A0A075B6I7 105 aa9.97□□□□□ -0.81
RXRA-202ENST00000481739 LCE6AA0A183 80 aa9.97□□□□□ -0.81
RXRA-202ENST00000481739 A0A1W2PNN7 141 aa9.97□□□□□ -0.81
RXRA-202ENST00000481739 FRAS1Q86XX4 4008 aa9.97□□□□□ -0.81
RXRA-202ENST00000481739 Q8N377 158 aa9.96□□□□□ -0.82
RXRA-202ENST00000481739 UBE2BP63146 152 aa9.95□□□□□ -0.82
RXRA-202ENST00000481739 LINC01547P58512 204 aaPredicted RBP9.94□□□□□ -0.82
RXRA-202ENST00000481739 TNP2Q05952 138 aa9.94□□□□□ -0.82
RXRA-202ENST00000481739 ANAPC13Q9BS18 74 aa9.94□□□□□ -0.82
RXRA-202ENST00000481739 HECTD4Q9Y4D8 3996 aa9.94□□□□□ -0.82
RXRA-202ENST00000481739 RTL8CO15255 209 aa9.93□□□□□ -0.82
RXRA-202ENST00000481739 H0Y9J4 135 aa9.92□□□□□ -0.82
RXRA-202ENST00000481739 FUSP35637 526 aaKnown RBP eCLIP9.92□□□□□ -0.825e-6■■■□□ 16.1
RXRA-202ENST00000481739 A0A1B0GW54 56 aa9.91□□□□□ -0.82
RXRA-202ENST00000481739 CHTF8P0CG12 524 aa9.91□□□□□ -0.82
RXRA-202ENST00000481739 DEFB105AQ8NG35 78 aa9.91□□□□□ -0.82
RXRA-202ENST00000481739 FAM19A1Q7Z5A9 133 aa9.9□□□□□ -0.82
RXRA-202ENST00000481739 IGLV5-52A0A0A0MRZ9 124 aa9.89□□□□□ -0.83
RXRA-202ENST00000481739 FAM236AA0A1B0GUQ0 79 aa9.89□□□□□ -0.83
RXRA-202ENST00000481739 FAM236BA0A1B0GV22 79 aa9.89□□□□□ -0.83
RXRA-202ENST00000481739 EPM2AB3EWF7 344 aa9.89□□□□□ -0.83
RXRA-202ENST00000481739 SPACA4Q8TDM5 124 aa9.88□□□□□ -0.83
RXRA-202ENST00000481739 IGKV3D-7A0A0C4DH55 119 aa9.87□□□□□ -0.83
RXRA-202ENST00000481739 PHF5AQ7RTV0 110 aaKnown RBP9.87□□□□□ -0.83
RXRA-202ENST00000481739 ERC2-IT1O76042 136 aa9.86□□□□□ -0.83
RXRA-202ENST00000481739 DNAH11Q96DT5 4516 aa9.86□□□□□ -0.83
RXRA-202ENST00000481739 Q6ZVQ6 151 aa9.86□□□□□ -0.83
RXRA-202ENST00000481739 ST20-AS1Q8NBB2 130 aa9.86□□□□□ -0.83
RXRA-202ENST00000481739 FAT2Q9NYQ8 4349 aa9.85□□□□□ -0.83
RXRA-202ENST00000481739 HIST1H4AP62805 103 aaKnown RBP9.85□□□□□ -0.83
RXRA-202ENST00000481739 DPH3Q96FX2 82 aa9.85□□□□□ -0.83
RXRA-202ENST00000481739 CXCL6P80162 114 aa9.84□□□□□ -0.83
RXRA-202ENST00000481739 PRLHP81277 87 aa9.84□□□□□ -0.83
RXRA-202ENST00000481739 F8WEM9 126 aa9.83□□□□□ -0.84
RXRA-202ENST00000481739 RYR2Q92736 4967 aa9.83□□□□□ -0.84
RXRA-202ENST00000481739 ATOX1O00244 68 aa9.82□□□□□ -0.84
RXRA-202ENST00000481739 BCE1O60756 84 aa9.82□□□□□ -0.84
RXRA-202ENST00000481739 KRTAP10-2P60368 255 aa9.82□□□□□ -0.84
RXRA-202ENST00000481739 C1orf137Q5JT78 98 aa9.82□□□□□ -0.84
RXRA-202ENST00000481739 HIGD2AQ9BW72 106 aa9.82□□□□□ -0.84
RXRA-202ENST00000481739 KMT2CQ8NEZ4 4911 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms