RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 Q6ZRU5 148 aa10.6□□□□□ -0.71
VARS2-207ENST00000476162 LINC00474Q9P2X8 69 aa10.59□□□□□ -0.71
VARS2-207ENST00000476162 UBL5Q9BZL1 73 aa10.58□□□□□ -0.72
VARS2-207ENST00000476162 RMI2Q96E14 147 aa10.58□□□□□ -0.72
VARS2-207ENST00000476162 TRAV10A0A0B4J240 114 aa10.57□□□□□ -0.72
VARS2-207ENST00000476162 TRBV7-6A0A0J9YX20 115 aa10.57□□□□□ -0.72
VARS2-207ENST00000476162 F8WEM9 126 aa10.57□□□□□ -0.72
VARS2-207ENST00000476162 K7EIL1 84 aa10.57□□□□□ -0.72
VARS2-207ENST00000476162 TM2D3Q9BRN9 247 aa10.57□□□□□ -0.72
VARS2-207ENST00000476162 SNURFQ9Y675 71 aa10.57□□□□□ -0.72
VARS2-207ENST00000476162 DNAH10OSP0CZ25 163 aa10.57□□□□□ -0.72
VARS2-207ENST00000476162 LINC00575Q6W349 94 aa10.57□□□□□ -0.72
VARS2-207ENST00000476162 BRK1Q8WUW1 75 aa10.57□□□□□ -0.72
VARS2-207ENST00000476162 A0A0U1RQV1 116 aa10.55□□□□□ -0.72
VARS2-207ENST00000476162 TMEM256-PLSCR3K7ERE1 68 aa10.54□□□□□ -0.72
VARS2-207ENST00000476162 RBM3P98179 157 aaKnown RBP10.54□□□□□ -0.72
VARS2-207ENST00000476162 LINC00588Q9Y4M8 146 aa10.54□□□□□ -0.72
VARS2-207ENST00000476162 VPREB1P12018 145 aa10.53□□□□□ -0.72
VARS2-207ENST00000476162 NDUFC1O43677 76 aa10.52□□□□□ -0.73
VARS2-207ENST00000476162 ATP5EP56381 51 aaPredicted RBP10.51□□□□□ -0.73
VARS2-207ENST00000476162 Q6ZRP5 223 aa10.5□□□□□ -0.73
VARS2-207ENST00000476162 MGAM2Q2M2H8 2515 aa10.5□□□□□ -0.73
VARS2-207ENST00000476162 SYCNQ0VAF6 134 aa10.5□□□□□ -0.73
VARS2-207ENST00000476162 DIRC1Q969H9 104 aa10.49□□□□□ -0.73
VARS2-207ENST00000476162 HUWE1Q7Z6Z7 4374 aaKnown RBP10.49□□□□□ -0.73
VARS2-207ENST00000476162 ZNF73O43830 326 aaPredicted RBP10.49□□□□□ -0.73
VARS2-207ENST00000476162 LINC01547P58512 204 aaPredicted RBP10.49□□□□□ -0.73
VARS2-207ENST00000476162 M0R378 163 aa10.48□□□□□ -0.73
VARS2-207ENST00000476162 Q6ZQT0 140 aa10.46□□□□□ -0.73
VARS2-207ENST00000476162 Q6ZQY7 126 aa10.46□□□□□ -0.74
VARS2-207ENST00000476162 TRBV7-4A0A0J9YYF1 115 aa10.45□□□□□ -0.74
VARS2-207ENST00000476162 CASC10Q5T4H9 136 aa10.45□□□□□ -0.74
VARS2-207ENST00000476162 FAM229BQ4G0N7 80 aa10.45□□□□□ -0.74
VARS2-207ENST00000476162 COX7BP24311 80 aa10.44□□□□□ -0.74
VARS2-207ENST00000476162 Q6ZVQ6 151 aa10.43□□□□□ -0.74
VARS2-207ENST00000476162 ELOF1P60002 83 aaKnown RBP10.43□□□□□ -0.74
VARS2-207ENST00000476162 HAMPP81172 84 aa10.43□□□□□ -0.74
VARS2-207ENST00000476162 LOC110117498A0A087WWA1 95 aa10.42□□□□□ -0.74
VARS2-207ENST00000476162 M0R2N4 97 aa10.42□□□□□ -0.74
VARS2-207ENST00000476162 CXCL6P80162 114 aa10.42□□□□□ -0.74
VARS2-207ENST00000476162 LAMTOR3Q9UHA4 124 aa10.42□□□□□ -0.74
VARS2-207ENST00000476162 MPLKIPQ8TAP9 179 aa10.41□□□□□ -0.74
VARS2-207ENST00000476162 SERTAD4-AS1Q5TG53 156 aa10.4□□□□□ -0.74
VARS2-207ENST00000476162 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.38□□□□□ -0.75
VARS2-207ENST00000476162 TLX1NBP0CAT3 122 aa10.38□□□□□ -0.75
VARS2-207ENST00000476162 NKAPP1Q8N9T2 125 aa10.38□□□□□ -0.75
VARS2-207ENST00000476162 LINC00528Q8N1L1 170 aa10.37□□□□□ -0.75
VARS2-207ENST00000476162 H3BQ85 93 aa10.37□□□□□ -0.75
VARS2-207ENST00000476162 TMEM254Q8TBM7 123 aa10.37□□□□□ -0.75
VARS2-207ENST00000476162 DNAH1Q9P2D7 4330 aa10.36□□□□□ -0.75
VARS2-207ENST00000476162 STAB2Q8WWQ8 2551 aa10.36□□□□□ -0.75
VARS2-207ENST00000476162 ERC2-IT1O76042 136 aa10.36□□□□□ -0.75
VARS2-207ENST00000476162 C7orf33Q8WU49 177 aa10.36□□□□□ -0.75
VARS2-207ENST00000476162 COL7A1Q02388 2944 aa10.36□□□□□ -0.75
VARS2-207ENST00000476162 NREPQ16612 68 aa10.35□□□□□ -0.75
VARS2-207ENST00000476162 MDFIQ99750 246 aa10.35□□□□□ -0.75
VARS2-207ENST00000476162 FAM168BA1KXE4 195 aa10.34□□□□□ -0.75
VARS2-207ENST00000476162 KCNQ1DNQ9H478 68 aa10.34□□□□□ -0.75
VARS2-207ENST00000476162 PRR15Q8IV56 129 aa10.32□□□□□ -0.76
VARS2-207ENST00000476162 PLA2G2DQ9UNK4 145 aa10.32□□□□□ -0.76
VARS2-207ENST00000476162 PDE6GP18545 87 aa10.31□□□□□ -0.76
VARS2-207ENST00000476162 PMAIP1Q13794 54 aa10.31□□□□□ -0.76
VARS2-207ENST00000476162 KRTAP1-5Q9BYS1 174 aa10.31□□□□□ -0.76
VARS2-207ENST00000476162 RPL37AP8A6NKH3 93 aa10.3□□□□□ -0.76
VARS2-207ENST00000476162 LYSTQ99698 3801 aa10.3□□□□□ -0.76
VARS2-207ENST00000476162 BPY2O14599 106 aa10.29□□□□□ -0.76
VARS2-207ENST00000476162 KRTAP7-1Q8IUC3 87 aa10.29□□□□□ -0.76
VARS2-207ENST00000476162 PRYO14603 147 aa10.29□□□□□ -0.76
VARS2-207ENST00000476162 SCXQ7RTU7 201 aa10.29□□□□□ -0.76
VARS2-207ENST00000476162 DNAH9Q9NYC9 4486 aa10.28□□□□□ -0.76
VARS2-207ENST00000476162 IGLV5-37A0A075B6J1 123 aa10.27□□□□□ -0.76
VARS2-207ENST00000476162 FUSP35637 526 aaKnown RBP eCLIP10.27□□□□□ -0.76
VARS2-207ENST00000476162 APLNQ9ULZ1 77 aa10.27□□□□□ -0.77
VARS2-207ENST00000476162 IGLV1-50A0A075B6I6 118 aa10.26□□□□□ -0.77
VARS2-207ENST00000476162 UBE2DNLQ8IWF7 75 aa10.26□□□□□ -0.77
VARS2-207ENST00000476162 B9D2Q9BPU9 175 aa10.25□□□□□ -0.77
VARS2-207ENST00000476162 OCR1Q9BZK8 76 aa10.24□□□□□ -0.77
VARS2-207ENST00000476162 KRTAP4-16G5E9R7 235 aaPredicted RBP10.23□□□□□ -0.77
VARS2-207ENST00000476162 MRPL55Q7Z7F7 128 aaKnown RBP10.23□□□□□ -0.77
VARS2-207ENST00000476162 DEFB105AQ8NG35 78 aa10.23□□□□□ -0.77
VARS2-207ENST00000476162 Q6ZRX8 168 aa10.23□□□□□ -0.77
VARS2-207ENST00000476162 DNAH10Q8IVF4 4471 aa10.23□□□□□ -0.77
VARS2-207ENST00000476162 PSCAO43653 123 aa10.22□□□□□ -0.77
VARS2-207ENST00000476162 SPRR1AP35321 89 aa10.22□□□□□ -0.77
VARS2-207ENST00000476162 Q9BRP9 147 aa10.21□□□□□ -0.77
VARS2-207ENST00000476162 ETDCA0A1B0GVM5 59 aa10.21□□□□□ -0.78
VARS2-207ENST00000476162 Q8N377 158 aa10.21□□□□□ -0.78
VARS2-207ENST00000476162 DHRS4-AS1Q9P1J3 65 aa10.21□□□□□ -0.78
VARS2-207ENST00000476162 hDV103S1A0JD37 113 aa10.2□□□□□ -0.78
VARS2-207ENST00000476162 Q1T7F1 81 aa10.2□□□□□ -0.78
VARS2-207ENST00000476162 HIGD2AQ9BW72 106 aa10.19□□□□□ -0.78
VARS2-207ENST00000476162 TENM2Q9NT68 2774 aa10.19□□□□□ -0.78
VARS2-207ENST00000476162 CSMD3Q7Z407 3707 aa10.18□□□□□ -0.78
VARS2-207ENST00000476162 A0A096LNI7 61 aa10.18□□□□□ -0.78
VARS2-207ENST00000476162 IGKV4-1P06312 121 aa10.18□□□□□ -0.78
VARS2-207ENST00000476162 CNBPP62633 177 aaKnown RBP10.18□□□□□ -0.78
VARS2-207ENST00000476162 IGKV2-24A0A0C4DH68 120 aa10.17□□□□□ -0.78
VARS2-207ENST00000476162 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.17□□□□□ -0.78
VARS2-207ENST00000476162 C16orf90A8MZG2 172 aa10.16□□□□□ -0.78
VARS2-207ENST00000476162 Q8N9L7 120 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms