RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 LOC107984640A0A0U1RRK4 108 aa4.55□□□□□ -1.68
UBR4-212ENST00000475973 LOC100996750A0A140TA64 210 aa4.55□□□□□ -1.68
UBR4-212ENST00000475973 J3KT08 172 aa4.55□□□□□ -1.68
UBR4-212ENST00000475973 CXCL6P80162 114 aa4.55□□□□□ -1.68
UBR4-212ENST00000475973 ENHOQ6UWT2 76 aa4.55□□□□□ -1.68
UBR4-212ENST00000475973 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.55□□□□□ -1.68
UBR4-212ENST00000475973 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
UBR4-212ENST00000475973 DNAH1Q9P2D7 4330 aa4.55□□□□□ -1.68
UBR4-212ENST00000475973 A0A096LPF7 62 aa4.54□□□□□ -1.68
UBR4-212ENST00000475973 RBM3P98179 157 aaKnown RBP4.54□□□□□ -1.68
UBR4-212ENST00000475973 C9orf116Q5BN46 136 aaPredicted RBP4.54□□□□□ -1.68
UBR4-212ENST00000475973 UNQ6190/PRO20217Q6UXQ8 127 aa4.54□□□□□ -1.68
UBR4-212ENST00000475973 LINC00476Q8WZB0 136 aa4.54□□□□□ -1.68
UBR4-212ENST00000475973 C6orf48Q9UBA6 75 aa4.54□□□□□ -1.68
UBR4-212ENST00000475973 DNAH7Q8WXX0 4024 aa4.54□□□□□ -1.68
UBR4-212ENST00000475973 M0R2N4 97 aa4.53□□□□□ -1.68
UBR4-212ENST00000475973 LY6G6CO95867 125 aa4.53□□□□□ -1.68
UBR4-212ENST00000475973 OXTP01178 125 aa4.53□□□□□ -1.68
UBR4-212ENST00000475973 VPREB1P12018 145 aa4.53□□□□□ -1.68
UBR4-212ENST00000475973 ELOF1P60002 83 aaKnown RBP4.53□□□□□ -1.68
UBR4-212ENST00000475973 SPAG11BQ08648 103 aa4.53□□□□□ -1.68
UBR4-212ENST00000475973 KLKP1Q107X0 134 aa4.53□□□□□ -1.68
UBR4-212ENST00000475973 FAM19A1Q7Z5A9 133 aa4.53□□□□□ -1.68
UBR4-212ENST00000475973 UBL5Q9BZL1 73 aa4.53□□□□□ -1.68
UBR4-212ENST00000475973 C11orf68Q9H3H3 251 aaKnown RBP4.53□□□□□ -1.68
UBR4-212ENST00000475973 TRAV7A0A075B6U4 112 aa4.52□□□□□ -1.69
UBR4-212ENST00000475973 ANGP03950 147 aaKnown RBP4.52□□□□□ -1.69
UBR4-212ENST00000475973 LINC01547P58512 204 aaPredicted RBP4.52□□□□□ -1.69
UBR4-212ENST00000475973 Q6ZVQ6 151 aa4.52□□□□□ -1.69
UBR4-212ENST00000475973 FAM19A5Q7Z5A7 132 aaPredicted RBP4.52□□□□□ -1.69
UBR4-212ENST00000475973 RYR2Q92736 4967 aa4.51□□□□□ -1.69
UBR4-212ENST00000475973 ERC2-IT1O76042 136 aa4.51□□□□□ -1.69
UBR4-212ENST00000475973 CLPSL2Q6UWE3 100 aa4.51□□□□□ -1.69
UBR4-212ENST00000475973 C11orf45Q8TAV5 145 aa4.51□□□□□ -1.69
UBR4-212ENST00000475973 TENM2Q9NT68 2774 aa4.51□□□□□ -1.69
UBR4-212ENST00000475973 TRAV23DV6A0A075B6W5 121 aa4.5□□□□□ -1.69
UBR4-212ENST00000475973 A0A1B0GW54 56 aa4.5□□□□□ -1.69
UBR4-212ENST00000475973 H7BZZ5 65 aa4.5□□□□□ -1.69
UBR4-212ENST00000475973 SPART-AS1P0CW21 52 aa4.5□□□□□ -1.69
UBR4-212ENST00000475973 DAD1P61803 113 aa4.5□□□□□ -1.69
UBR4-212ENST00000475973 STARD9Q9P2P6 4700 aa4.5□□□□□ -1.69
UBR4-212ENST00000475973 DYNC2H1Q8NCM8 4307 aaKnown RBP4.5□□□□□ -1.69
UBR4-212ENST00000475973 M0R378 163 aa4.49□□□□□ -1.69
UBR4-212ENST00000475973 ZNF73O43830 326 aaPredicted RBP4.49□□□□□ -1.69
UBR4-212ENST00000475973 Q5XG85 94 aa4.49□□□□□ -1.69
UBR4-212ENST00000475973 Q6ZQY7 126 aa4.49□□□□□ -1.69
UBR4-212ENST00000475973 C15orf56Q8N910 161 aa4.49□□□□□ -1.69
UBR4-212ENST00000475973 DIRC1Q969H9 104 aa4.49□□□□□ -1.69
UBR4-212ENST00000475973 IGLV10-54A0A075B6I4 117 aa4.48□□□□□ -1.69
UBR4-212ENST00000475973 IGLV5-48A0A075B6I7 105 aa4.48□□□□□ -1.69
UBR4-212ENST00000475973 IGLV5-37A0A075B6J1 123 aa4.48□□□□□ -1.69
UBR4-212ENST00000475973 PRYO14603 147 aa4.48□□□□□ -1.69
UBR4-212ENST00000475973 TLX1NBP0CAT3 122 aa4.48□□□□□ -1.69
UBR4-212ENST00000475973 COX7BP24311 80 aa4.48□□□□□ -1.69
UBR4-212ENST00000475973 LYSTQ99698 3801 aa4.48□□□□□ -1.69
UBR4-212ENST00000475973 KCNQ1DNQ9H478 68 aa4.48□□□□□ -1.69
UBR4-212ENST00000475973 SACSQ9NZJ4 4579 aa4.47□□□□□ -1.69
UBR4-212ENST00000475973 TRAV10A0A0B4J240 114 aa4.47□□□□□ -1.69
UBR4-212ENST00000475973 KRTAP4-16G5E9R7 235 aaPredicted RBP4.47□□□□□ -1.69
UBR4-212ENST00000475973 DEFB4AO15263 64 aa4.47□□□□□ -1.69
UBR4-212ENST00000475973 SPRR1AP35321 89 aa4.47□□□□□ -1.69
UBR4-212ENST00000475973 DSCR8Q96T75 97 aa4.47□□□□□ -1.69
UBR4-212ENST00000475973 KLK12Q9UKR0 248 aa4.47□□□□□ -1.69
UBR4-212ENST00000475973 ALMS1Q8TCU4 4167 aa4.46□□□□□ -1.7
UBR4-212ENST00000475973 CSMD3Q7Z407 3707 aa4.46□□□□□ -1.7
UBR4-212ENST00000475973 NDUFC1O43677 76 aa4.45□□□□□ -1.7
UBR4-212ENST00000475973 LINC01556Q5JQF7 62 aa4.45□□□□□ -1.7
UBR4-212ENST00000475973 Q6ZTC4 211 aa4.45□□□□□ -1.7
UBR4-212ENST00000475973 SERP1Q9Y6X1 66 aa4.45□□□□□ -1.7
UBR4-212ENST00000475973 DEFB131BA0A096LNP1 70 aa4.44□□□□□ -1.7
UBR4-212ENST00000475973 Q6ZRU5 148 aa4.44□□□□□ -1.7
UBR4-212ENST00000475973 C20orf197Q8N268 126 aa4.44□□□□□ -1.7
UBR4-212ENST00000475973 OCR1Q9BZK8 76 aa4.44□□□□□ -1.7
UBR4-212ENST00000475973 LAMTOR3Q9UHA4 124 aa4.44□□□□□ -1.7
UBR4-212ENST00000475973 FAM236DA0A1B0GTK5 79 aa4.43□□□□□ -1.7
UBR4-212ENST00000475973 IGKV4-1P06312 121 aa4.43□□□□□ -1.7
UBR4-212ENST00000475973 FAM236CP0DP71 79 aa4.43□□□□□ -1.7
UBR4-212ENST00000475973 Q6ZRP5 223 aa4.43□□□□□ -1.7
UBR4-212ENST00000475973 WFDC10BQ8IUB3 73 aa4.43□□□□□ -1.7
UBR4-212ENST00000475973 Q8N377 158 aa4.43□□□□□ -1.7
UBR4-212ENST00000475973 XAGE1AQ9HD64 81 aa4.43□□□□□ -1.7
UBR4-212ENST00000475973 APLNQ9ULZ1 77 aa4.43□□□□□ -1.7
UBR4-212ENST00000475973 BIRC6Q9NR09 4857 aa4.43□□□□□ -1.7
UBR4-212ENST00000475973 DNAH10OSP0CZ25 163 aa4.42□□□□□ -1.7
UBR4-212ENST00000475973 ATP5EP56381 51 aaPredicted RBP4.42□□□□□ -1.7
UBR4-212ENST00000475973 ESRGQ1W209 222 aa4.42□□□□□ -1.7
UBR4-212ENST00000475973 SPRR4Q96PI1 79 aa4.42□□□□□ -1.7
UBR4-212ENST00000475973 CAMK2N2Q96S95 79 aa4.42□□□□□ -1.7
UBR4-212ENST00000475973 A0A0U1RQV1 116 aa4.41□□□□□ -1.7
UBR4-212ENST00000475973 LINC00336Q6ZUF6 198 aa4.41□□□□□ -1.7
UBR4-212ENST00000475973 KRTAP19-1Q8IUB9 90 aa4.41□□□□□ -1.7
UBR4-212ENST00000475973 KRTAP7-1Q8IUC3 87 aa4.41□□□□□ -1.7
UBR4-212ENST00000475973 UBE2DNLQ8IWF7 75 aa4.41□□□□□ -1.7
UBR4-212ENST00000475973 EPPK1P58107 5090 aaKnown RBP4.4□□□□□ -1.7
UBR4-212ENST00000475973 HAMPP81172 84 aa4.4□□□□□ -1.71
UBR4-212ENST00000475973 IGLV1-50A0A075B6I6 118 aa4.39□□□□□ -1.71
UBR4-212ENST00000475973 HTN3P15516 51 aa4.39□□□□□ -1.71
UBR4-212ENST00000475973 SYCNQ0VAF6 134 aa4.39□□□□□ -1.71
UBR4-212ENST00000475973 C7orf33Q8WU49 177 aa4.39□□□□□ -1.71
UBR4-212ENST00000475973 ZCCHC13Q8WW36 166 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms