RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 RETNQ9HD89 108 aa14.23□□□□□ -0.13
SH3D21-202ENST00000474766 LELP1Q5T871 98 aa14.22□□□□□ -0.13
SH3D21-202ENST00000474766 STAB2Q8WWQ8 2551 aa14.22□□□□□ -0.13
SH3D21-202ENST00000474766 IGLV10-54A0A075B6I4 117 aa14.21□□□□□ -0.13
SH3D21-202ENST00000474766 TRAV10A0A0B4J240 114 aa14.21□□□□□ -0.13
SH3D21-202ENST00000474766 Q8NDZ9 215 aa14.21□□□□□ -0.13
SH3D21-202ENST00000474766 IGLV6-57P01721 117 aa14.2□□□□□ -0.14
SH3D21-202ENST00000474766 M0R2N4 97 aa14.19□□□□□ -0.14
SH3D21-202ENST00000474766 HTN3P15516 51 aa14.18□□□□□ -0.14
SH3D21-202ENST00000474766 C9orf116Q5BN46 136 aaPredicted RBP14.17□□□□□ -0.14
SH3D21-202ENST00000474766 RMI2Q96E14 147 aa14.17□□□□□ -0.14
SH3D21-202ENST00000474766 PRR34Q9NV39 138 aa14.17□□□□□ -0.14
SH3D21-202ENST00000474766 F8WEM9 126 aa14.16□□□□□ -0.14
SH3D21-202ENST00000474766 Q6ZQY7 126 aa14.16□□□□□ -0.14
SH3D21-202ENST00000474766 TRBV7-4A0A0J9YYF1 115 aa14.15□□□□□ -0.14
SH3D21-202ENST00000474766 A0A0J9YWU9 116 aa14.15□□□□□ -0.14
SH3D21-202ENST00000474766 ERC2-IT1O76042 136 aa14.15□□□□□ -0.14
SH3D21-202ENST00000474766 SNURFQ9Y675 71 aa14.15□□□□□ -0.14
SH3D21-202ENST00000474766 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.14□□□□□ -0.15
SH3D21-202ENST00000474766 FP248Q71RG6 208 aaPredicted RBP14.11□□□□□ -0.15
SH3D21-202ENST00000474766 DIRC1Q969H9 104 aa14.1□□□□□ -0.15
SH3D21-202ENST00000474766 KLK12Q9UKR0 248 aa14.1□□□□□ -0.15
SH3D21-202ENST00000474766 TRBV7-6A0A0J9YX20 115 aa14.09□□□□□ -0.15
SH3D21-202ENST00000474766 GVQW2A0A096LPI5 108 aaPredicted RBP14.08□□□□□ -0.15
SH3D21-202ENST00000474766 SPAG11BQ08648 103 aa14.08□□□□□ -0.15
SH3D21-202ENST00000474766 H3BNG1 76 aa14.07□□□□□ -0.16
SH3D21-202ENST00000474766 C10orf25Q5T742 122 aa14.07□□□□□ -0.16
SH3D21-202ENST00000474766 UNQ6190/PRO20217Q6UXQ8 127 aa14.07□□□□□ -0.16
SH3D21-202ENST00000474766 NREPQ16612 68 aa14.07□□□□□ -0.16
SH3D21-202ENST00000474766 WWC2-AS2Q96NR7 200 aa14.05□□□□□ -0.16
SH3D21-202ENST00000474766 DNAH7Q8WXX0 4024 aa14.05□□□□□ -0.16
SH3D21-202ENST00000474766 COX7BP24311 80 aa14.03□□□□□ -0.16
SH3D21-202ENST00000474766 TMEM254Q8TBM7 123 aa14.03□□□□□ -0.16
SH3D21-202ENST00000474766 ELOF1P60002 83 aaKnown RBP14.03□□□□□ -0.16
SH3D21-202ENST00000474766 BPY2O14599 106 aa14.02□□□□□ -0.16
SH3D21-202ENST00000474766 ZNF73O43830 326 aaPredicted RBP14.02□□□□□ -0.17
SH3D21-202ENST00000474766 Q6ZTC4 211 aa13.98□□□□□ -0.17
SH3D21-202ENST00000474766 SCXQ7RTU7 201 aa13.98□□□□□ -0.17
SH3D21-202ENST00000474766 WFDC10BQ8IUB3 73 aa13.98□□□□□ -0.17
SH3D21-202ENST00000474766 CSMD3Q7Z407 3707 aa13.96□□□□□ -0.17
SH3D21-202ENST00000474766 KRTAP26-1Q6PEX3 210 aa13.95□□□□□ -0.18
SH3D21-202ENST00000474766 C6orf48Q9UBA6 75 aa13.95□□□□□ -0.18
SH3D21-202ENST00000474766 A0A0U1RQV1 116 aa13.94□□□□□ -0.18
SH3D21-202ENST00000474766 LINC00474Q9P2X8 69 aa13.94□□□□□ -0.18
SH3D21-202ENST00000474766 OCR1Q9BZK8 76 aa13.93□□□□□ -0.18
SH3D21-202ENST00000474766 IGKV4-1P06312 121 aa13.93□□□□□ -0.18
SH3D21-202ENST00000474766 PRYO14603 147 aa13.92□□□□□ -0.18
SH3D21-202ENST00000474766 STARD9Q9P2P6 4700 aa13.91□□□□□ -0.18
SH3D21-202ENST00000474766 ESRGQ1W209 222 aa13.91□□□□□ -0.18
SH3D21-202ENST00000474766 BRK1Q8WUW1 75 aa13.9□□□□□ -0.18
SH3D21-202ENST00000474766 M0R378 163 aa13.89□□□□□ -0.19
SH3D21-202ENST00000474766 VPREB1P12018 145 aa13.89□□□□□ -0.19
SH3D21-202ENST00000474766 LINC00528Q8N1L1 170 aa13.89□□□□□ -0.19
SH3D21-202ENST00000474766 C11orf45Q8TAV5 145 aa13.88□□□□□ -0.19
SH3D21-202ENST00000474766 XAGE1AQ9HD64 81 aa13.88□□□□□ -0.19
SH3D21-202ENST00000474766 C3orf84H3BNL1 204 aa13.86□□□□□ -0.19
SH3D21-202ENST00000474766 FUSP35637 526 aaKnown RBP eCLIP13.86□□□□□ -0.19
SH3D21-202ENST00000474766 CASC10Q5T4H9 136 aa13.86□□□□□ -0.19
SH3D21-202ENST00000474766 PMAIP1Q13794 54 aa13.85□□□□□ -0.19
SH3D21-202ENST00000474766 HIGD2BQ4VC39 106 aa13.85□□□□□ -0.19
SH3D21-202ENST00000474766 C15orf56Q8N910 161 aa13.85□□□□□ -0.19
SH3D21-202ENST00000474766 CD164Q04900 197 aa13.85□□□□□ -0.19
SH3D21-202ENST00000474766 LINC01556Q5JQF7 62 aa13.85□□□□□ -0.19
SH3D21-202ENST00000474766 CAMK2N2Q96S95 79 aa13.85□□□□□ -0.19
SH3D21-202ENST00000474766 DEFB131BA0A096LNP1 70 aa13.84□□□□□ -0.19
SH3D21-202ENST00000474766 A0A1B0GW54 56 aa13.84□□□□□ -0.19
SH3D21-202ENST00000474766 TENM2Q9NT68 2774 aa13.83□□□□□ -0.2
SH3D21-202ENST00000474766 Q6ZRU5 148 aa13.81□□□□□ -0.2
SH3D21-202ENST00000474766 FAM229BQ4G0N7 80 aa13.8□□□□□ -0.2
SH3D21-202ENST00000474766 Q8N9L7 120 aa13.8□□□□□ -0.2
SH3D21-202ENST00000474766 DYNC2H1Q8NCM8 4307 aaKnown RBP13.79□□□□□ -0.2
SH3D21-202ENST00000474766 LCE6AA0A183 80 aa13.78□□□□□ -0.2
SH3D21-202ENST00000474766 KMT2CQ8NEZ4 4911 aaKnown RBP13.76□□□□□ -0.21
SH3D21-202ENST00000474766 IGLV5-48A0A075B6I7 105 aa13.75□□□□□ -0.21
SH3D21-202ENST00000474766 PLECQ15149 4684 aaKnown RBP13.75□□□□□ -0.21
SH3D21-202ENST00000474766 DNAH10OSP0CZ25 163 aa13.74□□□□□ -0.21
SH3D21-202ENST00000474766 NUPR2A6NF83 97 aa13.74□□□□□ -0.21
SH3D21-202ENST00000474766 HIGD2AQ9BW72 106 aa13.74□□□□□ -0.21
SH3D21-202ENST00000474766 IGKV2D-24A0A075B6R9 120 aa13.73□□□□□ -0.21
SH3D21-202ENST00000474766 PRR15Q8IV56 129 aa13.73□□□□□ -0.21
SH3D21-202ENST00000474766 MPLKIPQ8TAP9 179 aa13.73□□□□□ -0.21
SH3D21-202ENST00000474766 Q6ZRP5 223 aa13.7□□□□□ -0.22
SH3D21-202ENST00000474766 LYSTQ99698 3801 aa13.7□□□□□ -0.22
SH3D21-202ENST00000474766 KCNQ1DNQ9H478 68 aa13.69□□□□□ -0.22
SH3D21-202ENST00000474766 SYCNQ0VAF6 134 aa13.69□□□□□ -0.22
SH3D21-202ENST00000474766 hDV103S1A0JD37 113 aa13.68□□□□□ -0.22
SH3D21-202ENST00000474766 Q8N377 158 aa13.68□□□□□ -0.22
SH3D21-202ENST00000474766 SMIM29Q86T20 159 aa13.66□□□□□ -0.22
SH3D21-202ENST00000474766 LINC00588Q9Y4M8 146 aa13.64□□□□□ -0.23
SH3D21-202ENST00000474766 ZCCHC13Q8WW36 166 aaKnown RBP13.64□□□□□ -0.23
SH3D21-202ENST00000474766 SACSQ9NZJ4 4579 aa13.64□□□□□ -0.23
SH3D21-202ENST00000474766 Q1T7F1 81 aa13.63□□□□□ -0.23
SH3D21-202ENST00000474766 DHRS4-AS1Q9P1J3 65 aa13.63□□□□□ -0.23
SH3D21-202ENST00000474766 FAM30AQ9NZY2 134 aa13.63□□□□□ -0.23
SH3D21-202ENST00000474766 ALMS1Q8TCU4 4167 aa13.62□□□□□ -0.23
SH3D21-202ENST00000474766 TLX1NBP0CAT3 122 aa13.61□□□□□ -0.23
SH3D21-202ENST00000474766 C4orf48Q5BLP8 95 aa13.61□□□□□ -0.23
SH3D21-202ENST00000474766 APLNQ9ULZ1 77 aa13.61□□□□□ -0.23
SH3D21-202ENST00000474766 DNAH1Q9P2D7 4330 aa13.61□□□□□ -0.23
SH3D21-202ENST00000474766 A0A1W2PNM2 257 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms