RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 LOC110117498A0A087WWA1 95 aa14.01□□□□□ -0.17
CCM2-206ENST00000474617 SPRR1AP35321 89 aa14.01□□□□□ -0.17
CCM2-206ENST00000474617 LAMTOR3Q9UHA4 124 aa14□□□□□ -0.17
CCM2-206ENST00000474617 TRBV7-7A0A0K0K1E9 115 aa13.99□□□□□ -0.17
CCM2-206ENST00000474617 LINC00474Q9P2X8 69 aa13.97□□□□□ -0.17
CCM2-206ENST00000474617 DSCR8Q96T75 97 aa13.96□□□□□ -0.17
CCM2-206ENST00000474617 ETDCA0A1B0GVM5 59 aa13.95□□□□□ -0.18
CCM2-206ENST00000474617 LRCOL1A6NCL2 159 aa13.95□□□□□ -0.18
CCM2-206ENST00000474617 Q6ZRX8 168 aa13.95□□□□□ -0.18
CCM2-206ENST00000474617 KRTAP4-16G5E9R7 235 aaPredicted RBP13.95□□□□□ -0.18
CCM2-206ENST00000474617 Q6ZRN7 208 aaPredicted RBP13.94□□□□□ -0.18
CCM2-206ENST00000474617 C9orf163Q8N9P6 203 aa13.94□□□□□ -0.18
CCM2-206ENST00000474617 DNAH7Q8WXX0 4024 aa13.93□□□□□ -0.18
CCM2-206ENST00000474617 FAM168BA1KXE4 195 aa13.93□□□□□ -0.18
CCM2-206ENST00000474617 FAM19A5Q7Z5A7 132 aaPredicted RBP13.93□□□□□ -0.18
CCM2-206ENST00000474617 B5MCH6 92 aa13.92□□□□□ -0.18
CCM2-206ENST00000474617 A0A096LNI7 61 aa13.91□□□□□ -0.18
CCM2-206ENST00000474617 Q6ZQT0 140 aa13.91□□□□□ -0.18
CCM2-206ENST00000474617 KRTAP7-1Q8IUC3 87 aa13.91□□□□□ -0.18
CCM2-206ENST00000474617 NDUFV3P56181 108 aaKnown RBP13.9□□□□□ -0.19
CCM2-206ENST00000474617 ATP5EP2Q5VTU8 51 aa13.9□□□□□ -0.19
CCM2-206ENST00000474617 SMCR5Q8TEV8 140 aa13.9□□□□□ -0.19
CCM2-206ENST00000474617 REG3GQ6UW15 175 aa13.89□□□□□ -0.19
CCM2-206ENST00000474617 RPL37AP8A6NKH3 93 aa13.88□□□□□ -0.19
CCM2-206ENST00000474617 Q6JHZ5 121 aa13.88□□□□□ -0.19
CCM2-206ENST00000474617 MEGF8Q7Z7M0 2845 aa13.87□□□□□ -0.19
CCM2-206ENST00000474617 LINC00846Q9NV44 126 aa13.87□□□□□ -0.19
CCM2-206ENST00000474617 CSMD3Q7Z407 3707 aa13.86□□□□□ -0.19
CCM2-206ENST00000474617 PRKDCP78527 4128 aaKnown RBP13.86□□□□□ -0.19
CCM2-206ENST00000474617 DNHD1Q96M86 4753 aa13.86□□□□□ -0.19
CCM2-206ENST00000474617 TRBV7-4A0A0J9YYF1 115 aa13.85□□□□□ -0.19
CCM2-206ENST00000474617 A0A1B0GV72 72 aa13.85□□□□□ -0.19
CCM2-206ENST00000474617 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.85□□□□□ -0.19
CCM2-206ENST00000474617 UBL5Q9BZL1 73 aa13.85□□□□□ -0.19
CCM2-206ENST00000474617 PLECQ15149 4684 aaKnown RBP13.84□□□□□ -0.19
CCM2-206ENST00000474617 IGKV2-24A0A0C4DH68 120 aa13.83□□□□□ -0.2
CCM2-206ENST00000474617 Q6ZR54 194 aa13.83□□□□□ -0.2
CCM2-206ENST00000474617 IGLV5-48A0A075B6I7 105 aa13.81□□□□□ -0.2
CCM2-206ENST00000474617 A0A1B0GW54 56 aa13.8□□□□□ -0.2
CCM2-206ENST00000474617 VPS13DQ5THJ4 4388 aa13.8□□□□□ -0.2
CCM2-206ENST00000474617 Q9BRP9 147 aa13.8□□□□□ -0.2
CCM2-206ENST00000474617 LYSTQ99698 3801 aa13.79□□□□□ -0.2
CCM2-206ENST00000474617 A0A1W2PNN7 141 aa13.79□□□□□ -0.2
CCM2-206ENST00000474617 H0Y9J4 135 aa13.79□□□□□ -0.2
CCM2-206ENST00000474617 A0A087WTM6 91 aa13.78□□□□□ -0.2
CCM2-206ENST00000474617 UBE2BP63146 152 aa13.77□□□□□ -0.21
CCM2-206ENST00000474617 Q8N377 158 aa13.76□□□□□ -0.21
CCM2-206ENST00000474617 TENM2Q9NT68 2774 aa13.76□□□□□ -0.21
CCM2-206ENST00000474617 ANAPC13Q9BS18 74 aa13.75□□□□□ -0.21
CCM2-206ENST00000474617 LINC01547P58512 204 aaPredicted RBP13.74□□□□□ -0.21
CCM2-206ENST00000474617 EPM2AB3EWF7 344 aa13.73□□□□□ -0.21
CCM2-206ENST00000474617 M0R2N4 97 aa13.73□□□□□ -0.21
CCM2-206ENST00000474617 WWC2-AS2Q96NR7 200 aa13.73□□□□□ -0.21
CCM2-206ENST00000474617 STARD9Q9P2P6 4700 aa13.72□□□□□ -0.21
CCM2-206ENST00000474617 C1orf134Q5TEV5 83 aa13.71□□□□□ -0.21
CCM2-206ENST00000474617 DNAH10Q8IVF4 4471 aa13.71□□□□□ -0.22
CCM2-206ENST00000474617 FAM19A1Q7Z5A9 133 aa13.69□□□□□ -0.22
CCM2-206ENST00000474617 DEFB105AQ8NG35 78 aa13.69□□□□□ -0.22
CCM2-206ENST00000474617 SPACA4Q8TDM5 124 aa13.69□□□□□ -0.22
CCM2-206ENST00000474617 CHTF8P0CG12 524 aa13.68□□□□□ -0.22
CCM2-206ENST00000474617 CXCL6P80162 114 aa13.66□□□□□ -0.22
CCM2-206ENST00000474617 TNP2Q05952 138 aa13.66□□□□□ -0.22
CCM2-206ENST00000474617 FAM236AA0A1B0GUQ0 79 aa13.65□□□□□ -0.22
CCM2-206ENST00000474617 FAM236BA0A1B0GV22 79 aa13.65□□□□□ -0.22
CCM2-206ENST00000474617 PHF5AQ7RTV0 110 aaKnown RBP13.65□□□□□ -0.22
CCM2-206ENST00000474617 FUSP35637 526 aaKnown RBP eCLIP13.64□□□□□ -0.23
CCM2-206ENST00000474617 Q6ZVQ6 151 aa13.64□□□□□ -0.23
CCM2-206ENST00000474617 IGKV3D-7A0A0C4DH55 119 aa13.64□□□□□ -0.23
CCM2-206ENST00000474617 F8WEM9 126 aa13.64□□□□□ -0.23
CCM2-206ENST00000474617 RTL8CO15255 209 aa13.64□□□□□ -0.23
CCM2-206ENST00000474617 C3orf84H3BNL1 204 aa13.63□□□□□ -0.23
CCM2-206ENST00000474617 HIST1H4AP62805 103 aaKnown RBP13.63□□□□□ -0.23
CCM2-206ENST00000474617 LINC00476Q8WZB0 136 aa13.63□□□□□ -0.23
CCM2-206ENST00000474617 ERC2-IT1O76042 136 aa13.62□□□□□ -0.23
CCM2-206ENST00000474617 ST20-AS1Q8NBB2 130 aa13.62□□□□□ -0.23
CCM2-206ENST00000474617 BCE1O60756 84 aa13.61□□□□□ -0.23
CCM2-206ENST00000474617 DPH3Q96FX2 82 aa13.61□□□□□ -0.23
CCM2-206ENST00000474617 ATOX1O00244 68 aa13.6□□□□□ -0.23
CCM2-206ENST00000474617 LY6G6CO95867 125 aa13.6□□□□□ -0.23
CCM2-206ENST00000474617 FBN3Q75N90 2809 aa13.6□□□□□ -0.23
CCM2-206ENST00000474617 SPRR1BP22528 89 aa13.59□□□□□ -0.23
CCM2-206ENST00000474617 PRLHP81277 87 aa13.59□□□□□ -0.23
CCM2-206ENST00000474617 C1orf137Q5JT78 98 aa13.59□□□□□ -0.23
CCM2-206ENST00000474617 DNAH6Q9C0G6 4158 aa13.58□□□□□ -0.24
CCM2-206ENST00000474617 IGLV8-61A0A075B6I0 122 aa13.58□□□□□ -0.24
CCM2-206ENST00000474617 UBE2AP49459 152 aa13.58□□□□□ -0.24
CCM2-206ENST00000474617 HIGD2AQ9BW72 106 aa13.57□□□□□ -0.24
CCM2-206ENST00000474617 IGLV5-52A0A0A0MRZ9 124 aa13.55□□□□□ -0.24
CCM2-206ENST00000474617 Q8NBF4 154 aa13.55□□□□□ -0.24
CCM2-206ENST00000474617 HAMPP81172 84 aa13.54□□□□□ -0.24
CCM2-206ENST00000474617 SMIM29Q86T20 159 aa13.54□□□□□ -0.24
CCM2-206ENST00000474617 SPRR4Q96PI1 79 aa13.54□□□□□ -0.24
CCM2-206ENST00000474617 PLAC8Q9NZF1 115 aa13.54□□□□□ -0.24
CCM2-206ENST00000474617 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.54□□□□□ -0.24
CCM2-206ENST00000474617 NREPQ16612 68 aa13.53□□□□□ -0.24
CCM2-206ENST00000474617 PANO1I0J062 215 aa13.52□□□□□ -0.25
CCM2-206ENST00000474617 KRTAP13-1Q8IUC0 172 aa13.52□□□□□ -0.25
CCM2-206ENST00000474617 C3orf22Q8N5N4 141 aa13.51□□□□□ -0.25
CCM2-206ENST00000474617 KRTAP11-1Q8IUC1 163 aa13.5□□□□□ -0.25
CCM2-206ENST00000474617 A0A1W2PNM2 257 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms