RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	FABP4	P15090	132 aa		5.13	□□□□□ -1.59
CHEK2-223	ENST00000472807	LGALS3	P17931	250 aa	Known RBP	5.13	□□□□□ -1.59
CHEK2-223	ENST00000472807	DDT	P30046	118 aa		5.13	□□□□□ -1.59
CHEK2-223	ENST00000472807	LINC00310	P59036	64 aa		5.13	□□□□□ -1.59
CHEK2-223	ENST00000472807	SPANXB1	Q9NS25	103 aa	Predicted RBP	5.13	□□□□□ -1.59
CHEK2-223	ENST00000472807	LOC107984156	A0A0G2JMH3	177 aa		5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	HIST1H2BK	O60814	126 aa		5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	IGKC	P01834	107 aa		5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	HIST1H2BJ	P06899	126 aa		5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	HIST1H2BO	P23527	126 aa		5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	HIST1H2BB	P33778	126 aa		5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	HIST1H2BD	P58876	126 aa		5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	SNRPE	P62304	92 aa	Known RBP	5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	HIST1H2BC	P62807	126 aa		5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	HIST2H2BE	Q16778	126 aa		5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	COA6	Q5JTJ3	125 aa	Known RBP	5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	ARL17A	Q8IVW1	177 aa		5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807		Q8NBF4	154 aa		5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	SMCR5	Q8TEV8	140 aa		5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	HIST1H2BH	Q93079	126 aa		5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	HIST1H2BN	Q99877	126 aa		5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	HIST1H2BM	Q99879	126 aa		5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807	PPDPF	Q9H3Y8	114 aa		5.12	□□□□□ -1.59
CHEK2-223	ENST00000472807		B5MCH6	92 aa		5.11	□□□□□ -1.59
CHEK2-223	ENST00000472807	LINC00483	Q53H64	154 aa		5.11	□□□□□ -1.59
CHEK2-223	ENST00000472807	S100A7L2	Q5SY68	101 aa		5.11	□□□□□ -1.59
CHEK2-223	ENST00000472807	FP248	Q71RG6	208 aa	Predicted RBP	5.11	□□□□□ -1.59
CHEK2-223	ENST00000472807	PMCHL2	Q9BQD1	86 aa		5.11	□□□□□ -1.59
CHEK2-223	ENST00000472807	SMIM6	P0DI80	62 aa		5.1	□□□□□ -1.59
CHEK2-223	ENST00000472807	GAGE2A	Q6NT46	116 aa		5.1	□□□□□ -1.59
CHEK2-223	ENST00000472807	LINC00518	Q8N0U6	118 aa		5.1	□□□□□ -1.59
CHEK2-223	ENST00000472807	NDUFC2	O95298	119 aa		5.09	□□□□□ -1.59
CHEK2-223	ENST00000472807	SPINK1	P00995	79 aa		5.09	□□□□□ -1.59
CHEK2-223	ENST00000472807	AKR1D1	P51857	326 aa		5.09	□□□□□ -1.59
CHEK2-223	ENST00000472807	MOBP	Q13875	183 aa		5.09	□□□□□ -1.59
CHEK2-223	ENST00000472807		Q6ZRX8	168 aa		5.09	□□□□□ -1.59
CHEK2-223	ENST00000472807	TRAV23DV6	A0A075B6W5	121 aa		5.08	□□□□□ -1.6
CHEK2-223	ENST00000472807	IGLV9-49	A0A0B4J1Y8	123 aa		5.08	□□□□□ -1.6
CHEK2-223	ENST00000472807	IGLV6-57	P01721	117 aa		5.08	□□□□□ -1.6
CHEK2-223	ENST00000472807	S100A2	P29034	98 aa		5.08	□□□□□ -1.6
CHEK2-223	ENST00000472807	JOSD1	Q15040	202 aa	Predicted RBP	5.08	□□□□□ -1.6
CHEK2-223	ENST00000472807	HIST3H2BB	Q8N257	126 aa		5.08	□□□□□ -1.6
CHEK2-223	ENST00000472807		Q9BRP9	147 aa		5.08	□□□□□ -1.6
CHEK2-223	ENST00000472807		A0A0J9YXY3	114 aa		5.07	□□□□□ -1.6
CHEK2-223	ENST00000472807		E9PLD3	99 aa		5.07	□□□□□ -1.6
CHEK2-223	ENST00000472807	ERC2-IT1	O76042	136 aa		5.07	□□□□□ -1.6
CHEK2-223	ENST00000472807	NPC2	P61916	151 aa		5.07	□□□□□ -1.6
CHEK2-223	ENST00000472807	CBY1	Q9Y3M2	126 aa		5.07	□□□□□ -1.6
CHEK2-223	ENST00000472807	ZNF73	O43830	326 aa	Predicted RBP	5.06	□□□□□ -1.6
CHEK2-223	ENST00000472807	C12orf57	Q99622	126 aa		5.06	□□□□□ -1.6
CHEK2-223	ENST00000472807	SYS1-DBNDD2	H3BUS1	97 aa		5.05	□□□□□ -1.6
CHEK2-223	ENST00000472807	HINT1	P49773	126 aa	Predicted RBP	5.05	□□□□□ -1.6
CHEK2-223	ENST00000472807	RPS29	P62273	56 aa	Known RBP	5.05	□□□□□ -1.6
CHEK2-223	ENST00000472807	KRTAP19-4	Q3LI73	84 aa		5.05	□□□□□ -1.6
CHEK2-223	ENST00000472807	ADAMTSL4-AS1	Q5T5F5	129 aa		5.05	□□□□□ -1.6
CHEK2-223	ENST00000472807	C9orf153	Q5TBE3	101 aa		5.05	□□□□□ -1.6
CHEK2-223	ENST00000472807	SOSTDC1	Q6X4U4	206 aa		5.05	□□□□□ -1.6
CHEK2-223	ENST00000472807	SSBP3-AS1	Q7Z2R9	100 aa		5.05	□□□□□ -1.6
CHEK2-223	ENST00000472807	KRTAP13-3	Q3SY46	172 aa		5.04	□□□□□ -1.6
CHEK2-223	ENST00000472807	HIST1H2BL	Q99880	126 aa		5.04	□□□□□ -1.6
CHEK2-223	ENST00000472807	SPANXC	Q9NY87	97 aa		5.04	□□□□□ -1.6
CHEK2-223	ENST00000472807	SLC25A20	O43772	301 aa		5.03	□□□□□ -1.6
CHEK2-223	ENST00000472807	EIF4EBP3	O60516	100 aa	Predicted RBP	5.03	□□□□□ -1.6
CHEK2-223	ENST00000472807	TIMM17B	O60830	172 aa		5.03	□□□□□ -1.6
CHEK2-223	ENST00000472807		Q8N377	158 aa		5.03	□□□□□ -1.6
CHEK2-223	ENST00000472807	OR13C6P	Q8NH95	151 aa		5.03	□□□□□ -1.6
CHEK2-223	ENST00000472807	LINC00308	Q8TCZ7	52 aa		5.03	□□□□□ -1.6
CHEK2-223	ENST00000472807	ZNF815P	A8K554	130 aa		5.02	□□□□□ -1.61
CHEK2-223	ENST00000472807	KRTAP9-7	A8MTY7	169 aa		5.02	□□□□□ -1.61
CHEK2-223	ENST00000472807	LINC01545	Q5VT33	79 aa		5.02	□□□□□ -1.61
CHEK2-223	ENST00000472807	PET117	Q6UWS5	81 aa		5.02	□□□□□ -1.61
CHEK2-223	ENST00000472807	LITAF	Q99732	161 aa		5.02	□□□□□ -1.61
CHEK2-223	ENST00000472807	SLC25A34	Q6PIV7	304 aa		5.01	□□□□□ -1.61
CHEK2-223	ENST00000472807	ST20-AS1	Q8NBB2	130 aa		5.01	□□□□□ -1.61
CHEK2-223	ENST00000472807	SPANXD	Q9BXN6	97 aa		5.01	□□□□□ -1.61
CHEK2-223	ENST00000472807	DHRS4-AS1	Q9P1J3	65 aa		5.01	□□□□□ -1.61
CHEK2-223	ENST00000472807	ASB16-AS1	Q495Z4	193 aa		5	□□□□□ -1.61
CHEK2-223	ENST00000472807	PYY3	Q5JQD4	70 aa		5	□□□□□ -1.61
CHEK2-223	ENST00000472807	SEC61B	P60468	96 aa	Known RBP	4.99	□□□□□ -1.61
CHEK2-223	ENST00000472807	SCGB1D4	Q6XE38	83 aa		4.99	□□□□□ -1.61
CHEK2-223	ENST00000472807	C20orf202	A1L168	122 aa		4.98	□□□□□ -1.61
CHEK2-223	ENST00000472807	C3orf79	P0CE67	100 aa		4.98	□□□□□ -1.61
CHEK2-223	ENST00000472807	COX7B	P24311	80 aa		4.98	□□□□□ -1.61
CHEK2-223	ENST00000472807	KRTDAP	P60985	99 aa		4.98	□□□□□ -1.61
CHEK2-223	ENST00000472807	COPS9	Q8WXC6	57 aa		4.98	□□□□□ -1.61
CHEK2-223	ENST00000472807	TTTY13	Q9BZ97	58 aa		4.98	□□□□□ -1.61
CHEK2-223	ENST00000472807	TMEM238L	A0A1B0GVL6	79 aa		4.97	□□□□□ -1.61
CHEK2-223	ENST00000472807	SPRR1B	P22528	89 aa		4.97	□□□□□ -1.61
CHEK2-223	ENST00000472807	ELOF1	P60002	83 aa	Known RBP	4.97	□□□□□ -1.61
CHEK2-223	ENST00000472807	C6orf99	Q4VX62	202 aa		4.97	□□□□□ -1.61
CHEK2-223	ENST00000472807	LCE5A	Q5TCM9	118 aa		4.97	□□□□□ -1.61
CHEK2-223	ENST00000472807	LIMD2	Q9BT23	127 aa		4.97	□□□□□ -1.61
CHEK2-223	ENST00000472807	LAMTOR3	Q9UHA4	124 aa		4.97	□□□□□ -1.61
CHEK2-223	ENST00000472807	TRBV7-6	A0A0J9YX20	115 aa		4.95	□□□□□ -1.62
CHEK2-223	ENST00000472807	HRCT1	Q6UXD1	115 aa		4.95	□□□□□ -1.62
CHEK2-223	ENST00000472807	PCP4L1	A6NKN8	68 aa		4.94	□□□□□ -1.62
CHEK2-223	ENST00000472807	TSTD3	H0UI37	97 aa		4.94	□□□□□ -1.62
CHEK2-223	ENST00000472807	SCGB1D1	O95968	90 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms