RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 CBY1Q9Y3M2 126 aa11.94□□□□□ -0.5
CHRNA4-203ENST00000467563 IGLV1-50A0A075B6I6 118 aa11.93□□□□□ -0.5
CHRNA4-203ENST00000467563 ELOF1P60002 83 aaKnown RBP11.93□□□□□ -0.5
CHRNA4-203ENST00000467563 TRBV7-6A0A0J9YX20 115 aa11.93□□□□□ -0.5
CHRNA4-203ENST00000467563 COX7BP24311 80 aa11.93□□□□□ -0.5
CHRNA4-203ENST00000467563 TEX49A0A1B0GTD5 131 aa11.92□□□□□ -0.5
CHRNA4-203ENST00000467563 PPDPFLQ8WWR9 84 aa11.92□□□□□ -0.5
CHRNA4-203ENST00000467563 HYDINQ4G0P3 5121 aa11.92□□□□□ -0.5
CHRNA4-203ENST00000467563 hADV29S1A0JD25 119 aa11.9□□□□□ -0.5
CHRNA4-203ENST00000467563 PANO1I0J062 215 aa11.9□□□□□ -0.51
CHRNA4-203ENST00000467563 PKIGQ9Y2B9 76 aa11.9□□□□□ -0.51
CHRNA4-203ENST00000467563 FRAS1Q86XX4 4008 aa11.89□□□□□ -0.51
CHRNA4-203ENST00000467563 RTL8CO15255 209 aa11.89□□□□□ -0.51
CHRNA4-203ENST00000467563 TNP2Q05952 138 aa11.89□□□□□ -0.51
CHRNA4-203ENST00000467563 LINC00528Q8N1L1 170 aa11.88□□□□□ -0.51
CHRNA4-203ENST00000467563 ORMDL1Q9P0S3 153 aa11.88□□□□□ -0.51
CHRNA4-203ENST00000467563 PRYO14603 147 aa11.88□□□□□ -0.51
CHRNA4-203ENST00000467563 SNCGO76070 127 aa11.87□□□□□ -0.51
CHRNA4-203ENST00000467563 KRTAP4-16G5E9R7 235 aaPredicted RBP11.87□□□□□ -0.51
CHRNA4-203ENST00000467563 SPRR1AP35321 89 aa11.86□□□□□ -0.51
CHRNA4-203ENST00000467563 LINC00474Q9P2X8 69 aa11.86□□□□□ -0.51
CHRNA4-203ENST00000467563 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.85□□□□□ -0.51
CHRNA4-203ENST00000467563 J3QR89 54 aa11.84□□□□□ -0.51
CHRNA4-203ENST00000467563 Q6ZQY7 126 aa11.83□□□□□ -0.51
CHRNA4-203ENST00000467563 PHF5AQ7RTV0 110 aaKnown RBP11.83□□□□□ -0.52
CHRNA4-203ENST00000467563 SPACA4Q8TDM5 124 aa11.83□□□□□ -0.52
CHRNA4-203ENST00000467563 IGLV5-52A0A0A0MRZ9 124 aa11.82□□□□□ -0.52
CHRNA4-203ENST00000467563 SACSQ9NZJ4 4579 aa11.82□□□□□ -0.52
CHRNA4-203ENST00000467563 B5MCH6 92 aa11.82□□□□□ -0.52
CHRNA4-203ENST00000467563 REG3GQ6UW15 175 aa11.81□□□□□ -0.52
CHRNA4-203ENST00000467563 DNAH11Q96DT5 4516 aa11.8□□□□□ -0.52
CHRNA4-203ENST00000467563 Q6ZRX8 168 aa11.8□□□□□ -0.52
CHRNA4-203ENST00000467563 KRTAP11-1Q8IUC1 163 aa11.8□□□□□ -0.52
CHRNA4-203ENST00000467563 ETDCA0A1B0GVM5 59 aa11.8□□□□□ -0.52
CHRNA4-203ENST00000467563 TMEM256-PLSCR3K7ERE1 68 aa11.8□□□□□ -0.52
CHRNA4-203ENST00000467563 DPH3Q96FX2 82 aa11.8□□□□□ -0.52
CHRNA4-203ENST00000467563 FAT2Q9NYQ8 4349 aa11.79□□□□□ -0.52
CHRNA4-203ENST00000467563 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.79□□□□□ -0.52
CHRNA4-203ENST00000467563 Q9BRP9 147 aa11.79□□□□□ -0.52
CHRNA4-203ENST00000467563 EPM2AB3EWF7 344 aa11.77□□□□□ -0.53
CHRNA4-203ENST00000467563 INAFM2P0DMQ5 153 aa11.77□□□□□ -0.53
CHRNA4-203ENST00000467563 KRTAP10-2P60368 255 aa11.77□□□□□ -0.53
CHRNA4-203ENST00000467563 OBSCN-AS1Q96MR7 158 aa11.77□□□□□ -0.53
CHRNA4-203ENST00000467563 UBE2BP63146 152 aa11.76□□□□□ -0.53
CHRNA4-203ENST00000467563 A0A1B0GV72 72 aa11.75□□□□□ -0.53
CHRNA4-203ENST00000467563 DNAH5Q8TE73 4624 aa11.75□□□□□ -0.53
CHRNA4-203ENST00000467563 VPS25Q9BRG1 176 aa11.74□□□□□ -0.53
CHRNA4-203ENST00000467563 DHRS4-AS1Q9P1J3 65 aa11.74□□□□□ -0.53
CHRNA4-203ENST00000467563 LCE6AA0A183 80 aa11.72□□□□□ -0.53
CHRNA4-203ENST00000467563 C14orf132Q9NPU4 83 aa11.72□□□□□ -0.53
CHRNA4-203ENST00000467563 PKD1P98161 4303 aa11.71□□□□□ -0.53
CHRNA4-203ENST00000467563 FAM19A1Q7Z5A9 133 aa11.71□□□□□ -0.54
CHRNA4-203ENST00000467563 H3BQ85 93 aa11.7□□□□□ -0.54
CHRNA4-203ENST00000467563 ERC2-IT1O76042 136 aa11.7□□□□□ -0.54
CHRNA4-203ENST00000467563 PRLHP81277 87 aa11.7□□□□□ -0.54
CHRNA4-203ENST00000467563 SMCR5Q8TEV8 140 aa11.69□□□□□ -0.54
CHRNA4-203ENST00000467563 PLAC8Q9NZF1 115 aa11.69□□□□□ -0.54
CHRNA4-203ENST00000467563 JMJD7-PLA2G4BH0Y9G9 81 aa11.69□□□□□ -0.54
CHRNA4-203ENST00000467563 CDIP1Q9H305 208 aa11.68□□□□□ -0.54
CHRNA4-203ENST00000467563 LAMTOR3Q9UHA4 124 aa11.68□□□□□ -0.54
CHRNA4-203ENST00000467563 DNAH8Q96JB1 4490 aa11.68□□□□□ -0.54
CHRNA4-203ENST00000467563 GHRHP01286 108 aa11.67□□□□□ -0.54
CHRNA4-203ENST00000467563 LINC01547P58512 204 aaPredicted RBP11.67□□□□□ -0.54
CHRNA4-203ENST00000467563 ST20-AS1Q8NBB2 130 aa11.67□□□□□ -0.54
CHRNA4-203ENST00000467563 DEFB105AQ8NG35 78 aa11.66□□□□□ -0.54
CHRNA4-203ENST00000467563 Q8N377 158 aa11.66□□□□□ -0.54
CHRNA4-203ENST00000467563 FAM240AA0A1B0GVK7 77 aa11.64□□□□□ -0.55
CHRNA4-203ENST00000467563 FAM30AQ9NZY2 134 aa11.64□□□□□ -0.55
CHRNA4-203ENST00000467563 NDUFV3P56181 108 aaKnown RBP11.63□□□□□ -0.55
CHRNA4-203ENST00000467563 RBM3P98179 157 aaKnown RBP11.63□□□□□ -0.55
CHRNA4-203ENST00000467563 GAGE2AQ6NT46 116 aa11.63□□□□□ -0.55
CHRNA4-203ENST00000467563 HIGD2AQ9BW72 106 aa11.63□□□□□ -0.55
CHRNA4-203ENST00000467563 IGLV5-48A0A075B6I7 105 aa11.61□□□□□ -0.55
CHRNA4-203ENST00000467563 H0Y9J4 135 aa11.61□□□□□ -0.55
CHRNA4-203ENST00000467563 BCE1O60756 84 aa11.61□□□□□ -0.55
CHRNA4-203ENST00000467563 KRTAP10-1P60331 282 aa11.61□□□□□ -0.55
CHRNA4-203ENST00000467563 UBE2AP49459 152 aa11.59□□□□□ -0.55
CHRNA4-203ENST00000467563 KMT2CQ8NEZ4 4911 aaKnown RBP11.59□□□□□ -0.55
CHRNA4-203ENST00000467563 SRRM2Q9UQ35 2752 aaKnown RBP11.58□□□□□ -0.56
CHRNA4-203ENST00000467563 CCKP06307 115 aa11.58□□□□□ -0.56
CHRNA4-203ENST00000467563 KRTAP13-1Q8IUC0 172 aa11.58□□□□□ -0.56
CHRNA4-203ENST00000467563 C3orf22Q8N5N4 141 aa11.58□□□□□ -0.56
CHRNA4-203ENST00000467563 ACYP1P07311 99 aa11.58□□□□□ -0.56
CHRNA4-203ENST00000467563 RYR2Q92736 4967 aa11.58□□□□□ -0.56
CHRNA4-203ENST00000467563 Q6ZSA8 131 aa11.57□□□□□ -0.56
CHRNA4-203ENST00000467563 PSORS1C2Q9UIG4 136 aa11.57□□□□□ -0.56
CHRNA4-203ENST00000467563 LOC110117498A0A087WWA1 95 aa11.56□□□□□ -0.56
CHRNA4-203ENST00000467563 Q6ZQT0 140 aa11.56□□□□□ -0.56
CHRNA4-203ENST00000467563 CIRBP-AS1Q8TBR5 109 aa11.56□□□□□ -0.56
CHRNA4-203ENST00000467563 XGP55808 180 aa11.56□□□□□ -0.56
CHRNA4-203ENST00000467563 DSCR8Q96T75 97 aa11.56□□□□□ -0.56
CHRNA4-203ENST00000467563 TRBV7-4A0A0J9YYF1 115 aa11.55□□□□□ -0.56
CHRNA4-203ENST00000467563 LINC00336Q6ZUF6 198 aa11.53□□□□□ -0.56
CHRNA4-203ENST00000467563 SCXQ7RTU7 201 aa11.53□□□□□ -0.56
CHRNA4-203ENST00000467563 PKHD1P08F94 4074 aa11.53□□□□□ -0.56
CHRNA4-203ENST00000467563 SIGMAR1Q99720 223 aa11.52□□□□□ -0.57
CHRNA4-203ENST00000467563 HAMPP81172 84 aa11.51□□□□□ -0.57
CHRNA4-203ENST00000467563 SMIM29Q86T20 159 aa11.51□□□□□ -0.57
CHRNA4-203ENST00000467563 MT-ATP8P03928 68 aa11.51□□□□□ -0.57
CHRNA4-203ENST00000467563 C1orf137Q5JT78 98 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms