RNA–Protein interactions for RNA: ENST00000466348.5

PDZRN3-204, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-204ENST00000466348 PDE6GP18545 87 aa6.86□□□□□ -1.31
PDZRN3-204ENST00000466348 Q6ZQY7 126 aa6.86□□□□□ -1.31
PDZRN3-204ENST00000466348 FAM19A5Q7Z5A7 132 aaPredicted RBP6.86□□□□□ -1.31
PDZRN3-204ENST00000466348 LINC00476Q8WZB0 136 aa6.86□□□□□ -1.31
PDZRN3-204ENST00000466348 SIGMAR1Q99720 223 aa6.86□□□□□ -1.31
PDZRN3-204ENST00000466348 MEGF8Q7Z7M0 2845 aa6.86□□□□□ -1.31
PDZRN3-204ENST00000466348 ETDCA0A1B0GVM5 59 aa6.85□□□□□ -1.31
PDZRN3-204ENST00000466348 KRTAP4-16G5E9R7 235 aaPredicted RBP6.85□□□□□ -1.31
PDZRN3-204ENST00000466348 LY6G6CO95867 125 aa6.85□□□□□ -1.31
PDZRN3-204ENST00000466348 Q6ZRX8 168 aa6.85□□□□□ -1.31
PDZRN3-204ENST00000466348 B5MCH6 92 aa6.84□□□□□ -1.31
PDZRN3-204ENST00000466348 REG3GQ6UW15 175 aa6.84□□□□□ -1.31
PDZRN3-204ENST00000466348 CDIP1Q9H305 208 aa6.84□□□□□ -1.31
PDZRN3-204ENST00000466348 IGKV2-24A0A0C4DH68 120 aa6.83□□□□□ -1.32
PDZRN3-204ENST00000466348 RPL37AP8A6NKH3 93 aa6.83□□□□□ -1.32
PDZRN3-204ENST00000466348 EPM2AB3EWF7 344 aa6.83□□□□□ -1.32
PDZRN3-204ENST00000466348 DNHD1Q96M86 4753 aa6.83□□□□□ -1.32
PDZRN3-204ENST00000466348 A0A1W2PNN7 141 aa6.82□□□□□ -1.32
PDZRN3-204ENST00000466348 RBM3P98179 157 aaKnown RBP6.82□□□□□ -1.32
PDZRN3-204ENST00000466348 LAMTOR3Q9UHA4 124 aa6.82□□□□□ -1.32
PDZRN3-204ENST00000466348 PRKDCP78527 4128 aaKnown RBP6.82□□□□□ -1.32
PDZRN3-204ENST00000466348 LOC110117498A0A087WWA1 95 aa6.81□□□□□ -1.32
PDZRN3-204ENST00000466348 H0Y9J4 135 aa6.81□□□□□ -1.32
PDZRN3-204ENST00000466348 DNAH1Q9P2D7 4330 aa6.81□□□□□ -1.32
PDZRN3-204ENST00000466348 CCKP06307 115 aa6.8□□□□□ -1.32
PDZRN3-204ENST00000466348 C14orf132Q9NPU4 83 aa6.8□□□□□ -1.32
PDZRN3-204ENST00000466348 RTL8CO15255 209 aa6.79□□□□□ -1.32
PDZRN3-204ENST00000466348 SCGB1A1P11684 91 aa6.79□□□□□ -1.32
PDZRN3-204ENST00000466348 NDUFV3P56181 108 aaKnown RBP6.79□□□□□ -1.32
PDZRN3-204ENST00000466348 SPACA4Q8TDM5 124 aa6.79□□□□□ -1.32
PDZRN3-204ENST00000466348 DSCR8Q96T75 97 aa6.79□□□□□ -1.32
PDZRN3-204ENST00000466348 FBN3Q75N90 2809 aa6.78□□□□□ -1.32
PDZRN3-204ENST00000466348 IGLV5-48A0A075B6I7 105 aa6.78□□□□□ -1.32
PDZRN3-204ENST00000466348 GAGE2AQ6NT46 116 aa6.78□□□□□ -1.32
PDZRN3-204ENST00000466348 DPH3Q96FX2 82 aa6.78□□□□□ -1.32
PDZRN3-204ENST00000466348 IGLV5-52A0A0A0MRZ9 124 aa6.77□□□□□ -1.33
PDZRN3-204ENST00000466348 UBE2BP63146 152 aa6.77□□□□□ -1.33
PDZRN3-204ENST00000466348 LINC00643Q86TS7 51 aa6.77□□□□□ -1.33
PDZRN3-204ENST00000466348 Q9BRP9 147 aa6.77□□□□□ -1.33
PDZRN3-204ENST00000466348 CHTF8P0CG12 524 aa6.76□□□□□ -1.33
PDZRN3-204ENST00000466348 XGP55808 180 aa6.76□□□□□ -1.33
PDZRN3-204ENST00000466348 TENM2Q9NT68 2774 aa6.75□□□□□ -1.33
PDZRN3-204ENST00000466348 DNAH7Q8WXX0 4024 aa6.75□□□□□ -1.33
PDZRN3-204ENST00000466348 TRBV7-4A0A0J9YYF1 115 aa6.75□□□□□ -1.33
PDZRN3-204ENST00000466348 A0A1B0GW54 56 aa6.75□□□□□ -1.33
PDZRN3-204ENST00000466348 Q6Q795 121 aa6.75□□□□□ -1.33
PDZRN3-204ENST00000466348 Q6ZQT0 140 aa6.75□□□□□ -1.33
PDZRN3-204ENST00000466348 FAM19A1Q7Z5A9 133 aa6.75□□□□□ -1.33
PDZRN3-204ENST00000466348 VPS13DQ5THJ4 4388 aa6.75□□□□□ -1.33
PDZRN3-204ENST00000466348 CSMD3Q7Z407 3707 aa6.75□□□□□ -1.33
PDZRN3-204ENST00000466348 PHF5AQ7RTV0 110 aaKnown RBP6.74□□□□□ -1.33
PDZRN3-204ENST00000466348 Q8N377 158 aa6.74□□□□□ -1.33
PDZRN3-204ENST00000466348 IMUPQ9GZP8 106 aa6.74□□□□□ -1.33
PDZRN3-204ENST00000466348 PLAC8Q9NZF1 115 aa6.74□□□□□ -1.33
PDZRN3-204ENST00000466348 BCE1O60756 84 aa6.73□□□□□ -1.33
PDZRN3-204ENST00000466348 LINC01547P58512 204 aaPredicted RBP6.73□□□□□ -1.33
PDZRN3-204ENST00000466348 SMCR5Q8TEV8 140 aa6.73□□□□□ -1.33
PDZRN3-204ENST00000466348 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.73□□□□□ -1.33
PDZRN3-204ENST00000466348 PLECQ15149 4684 aaKnown RBP6.73□□□□□ -1.33
PDZRN3-204ENST00000466348 MT-ATP8P03928 68 aa6.72□□□□□ -1.33
PDZRN3-204ENST00000466348 TNP2Q05952 138 aa6.72□□□□□ -1.33
PDZRN3-204ENST00000466348 STARD9Q9P2P6 4700 aa6.7□□□□□ -1.34
PDZRN3-204ENST00000466348 TRBV7-7A0A0K0K1E9 115 aa6.7□□□□□ -1.34
PDZRN3-204ENST00000466348 PANO1I0J062 215 aa6.7□□□□□ -1.34
PDZRN3-204ENST00000466348 SPRR1BP22528 89 aa6.7□□□□□ -1.34
PDZRN3-204ENST00000466348 UBE2AP49459 152 aa6.7□□□□□ -1.34
PDZRN3-204ENST00000466348 ATP5EP2Q5VTU8 51 aa6.7□□□□□ -1.34
PDZRN3-204ENST00000466348 DEFB105AQ8NG35 78 aa6.7□□□□□ -1.34
PDZRN3-204ENST00000466348 UBL5Q9BZL1 73 aa6.7□□□□□ -1.34
PDZRN3-204ENST00000466348 LINC00846Q9NV44 126 aa6.7□□□□□ -1.34
PDZRN3-204ENST00000466348 ERC2-IT1O76042 136 aa6.69□□□□□ -1.34
PDZRN3-204ENST00000466348 Q6JHZ5 121 aa6.69□□□□□ -1.34
PDZRN3-204ENST00000466348 F8WEM9 126 aa6.68□□□□□ -1.34
PDZRN3-204ENST00000466348 PRLHP81277 87 aa6.68□□□□□ -1.34
PDZRN3-204ENST00000466348 HIGD2AQ9BW72 106 aa6.68□□□□□ -1.34
PDZRN3-204ENST00000466348 LINC00336Q6ZUF6 198 aa6.67□□□□□ -1.34
PDZRN3-204ENST00000466348 KRTAP13-1Q8IUC0 172 aa6.67□□□□□ -1.34
PDZRN3-204ENST00000466348 KRTAP11-1Q8IUC1 163 aa6.67□□□□□ -1.34
PDZRN3-204ENST00000466348 ST20-AS1Q8NBB2 130 aa6.67□□□□□ -1.34
PDZRN3-204ENST00000466348 IGLV8-61A0A075B6I0 122 aa6.66□□□□□ -1.34
PDZRN3-204ENST00000466348 LCE6AA0A183 80 aa6.66□□□□□ -1.34
PDZRN3-204ENST00000466348 A0A1B0GV72 72 aa6.66□□□□□ -1.34
PDZRN3-204ENST00000466348 FUSP35637 526 aaKnown RBP eCLIP6.66□□□□□ -1.34
PDZRN3-204ENST00000466348 PCP4P48539 62 aa6.66□□□□□ -1.34
PDZRN3-204ENST00000466348 SMIM29Q86T20 159 aa6.65□□□□□ -1.34
PDZRN3-204ENST00000466348 ZNF706Q9Y5V0 76 aaPredicted RBP6.65□□□□□ -1.34
PDZRN3-204ENST00000466348 C1orf137Q5JT78 98 aa6.64□□□□□ -1.35
PDZRN3-204ENST00000466348 Q6ZSA8 131 aa6.64□□□□□ -1.35
PDZRN3-204ENST00000466348 DNAH6Q9C0G6 4158 aa6.63□□□□□ -1.35
PDZRN3-204ENST00000466348 KRTAP10-2P60368 255 aa6.62□□□□□ -1.35
PDZRN3-204ENST00000466348 LYSTQ99698 3801 aa6.62□□□□□ -1.35
PDZRN3-204ENST00000466348 PSORS1C2Q9UIG4 136 aa6.62□□□□□ -1.35
PDZRN3-204ENST00000466348 ZNF861PO60384 105 aa6.61□□□□□ -1.35
PDZRN3-204ENST00000466348 RPL37AP61513 92 aaKnown RBP6.61□□□□□ -1.35
PDZRN3-204ENST00000466348 CXCL6P80162 114 aa6.61□□□□□ -1.35
PDZRN3-204ENST00000466348 Q6ZVQ6 151 aa6.61□□□□□ -1.35
PDZRN3-204ENST00000466348 Q8NBF4 154 aa6.61□□□□□ -1.35
PDZRN3-204ENST00000466348 SPRR4Q96PI1 79 aa6.61□□□□□ -1.35
PDZRN3-204ENST00000466348 TGP01266 2768 aa6.61□□□□□ -1.35
PDZRN3-204ENST00000466348 DNAH10Q8IVF4 4471 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms