RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 GAGE2BQ13066 116 aa10.79□□□□□ -0.68
EXOSC3-203ENST00000465229 GAGE2EQ4V326 116 aa10.79□□□□□ -0.68
EXOSC3-203ENST00000465229 GAGE2DQ9UEU5 116 aa10.79□□□□□ -0.68
EXOSC3-203ENST00000465229 SNCGO76070 127 aa10.78□□□□□ -0.68
EXOSC3-203ENST00000465229 C6orf99Q4VX62 202 aa10.78□□□□□ -0.68
EXOSC3-203ENST00000465229 PKIGQ9Y2B9 76 aa10.78□□□□□ -0.68
EXOSC3-203ENST00000465229 C22orf24Q9Y442 160 aa10.78□□□□□ -0.68
EXOSC3-203ENST00000465229 DNAH8Q96JB1 4490 aa10.78□□□□□ -0.68
EXOSC3-203ENST00000465229 M0R378 163 aa10.77□□□□□ -0.68
EXOSC3-203ENST00000465229 CHTF8P0CG12 524 aa10.77□□□□□ -0.68
EXOSC3-203ENST00000465229 IGKV2-24A0A0C4DH68 120 aa10.76□□□□□ -0.69
EXOSC3-203ENST00000465229 PANO1I0J062 215 aa10.76□□□□□ -0.69
EXOSC3-203ENST00000465229 CDIP1Q9H305 208 aa10.76□□□□□ -0.69
EXOSC3-203ENST00000465229 TRBV10-3A0A0K0K1G6 114 aa10.76□□□□□ -0.69
EXOSC3-203ENST00000465229 FAM30AQ9NZY2 134 aa10.76□□□□□ -0.69
EXOSC3-203ENST00000465229 PLA2G2DQ9UNK4 145 aa10.76□□□□□ -0.69
EXOSC3-203ENST00000465229 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.76□□□□□ -0.69
EXOSC3-203ENST00000465229 TRBV7-6A0A0J9YX20 115 aa10.75□□□□□ -0.69
EXOSC3-203ENST00000465229 FAM240AA0A1B0GVK7 77 aa10.75□□□□□ -0.69
EXOSC3-203ENST00000465229 SIGMAR1Q99720 223 aa10.75□□□□□ -0.69
EXOSC3-203ENST00000465229 TRAV23DV6A0A075B6W5 121 aa10.74□□□□□ -0.69
EXOSC3-203ENST00000465229 C9orf129Q5T035 196 aaKnown RBP10.74□□□□□ -0.69
EXOSC3-203ENST00000465229 LINC00575Q6W349 94 aa10.74□□□□□ -0.69
EXOSC3-203ENST00000465229 ORMDL1Q9P0S3 153 aa10.74□□□□□ -0.69
EXOSC3-203ENST00000465229 EPPK1P58107 5090 aaKnown RBP10.74□□□□□ -0.69
EXOSC3-203ENST00000465229 INAFM2P0DMQ5 153 aa10.73□□□□□ -0.69
EXOSC3-203ENST00000465229 Q6ZSA8 131 aa10.73□□□□□ -0.69
EXOSC3-203ENST00000465229 SPACA4Q8TDM5 124 aa10.73□□□□□ -0.69
EXOSC3-203ENST00000465229 LINC00474Q9P2X8 69 aa10.73□□□□□ -0.69
EXOSC3-203ENST00000465229 DIRC1Q969H9 104 aa10.72□□□□□ -0.69
EXOSC3-203ENST00000465229 DPH3Q96FX2 82 aa10.71□□□□□ -0.69
EXOSC3-203ENST00000465229 OBSCN-AS1Q96MR7 158 aa10.71□□□□□ -0.69
EXOSC3-203ENST00000465229 ZNF73O43830 326 aaPredicted RBP10.7□□□□□ -0.7
EXOSC3-203ENST00000465229 IGLV5-37A0A075B6J1 123 aa10.69□□□□□ -0.7
EXOSC3-203ENST00000465229 ACYP1P07311 99 aa10.69□□□□□ -0.7
EXOSC3-203ENST00000465229 A0A1W2PNN7 141 aa10.69□□□□□ -0.7
EXOSC3-203ENST00000465229 hADV29S1A0JD25 119 aa10.69□□□□□ -0.7
EXOSC3-203ENST00000465229 FAM168BA1KXE4 195 aa10.69□□□□□ -0.7
EXOSC3-203ENST00000465229 H3BQ85 93 aa10.69□□□□□ -0.7
EXOSC3-203ENST00000465229 TMEM256-PLSCR3K7ERE1 68 aa10.69□□□□□ -0.7
EXOSC3-203ENST00000465229 KRTAP7-1Q8IUC3 87 aa10.68□□□□□ -0.7
EXOSC3-203ENST00000465229 APOBP04114 4563 aaKnown RBP10.67□□□□□ -0.7
EXOSC3-203ENST00000465229 ELOF1P60002 83 aaKnown RBP10.67□□□□□ -0.7
EXOSC3-203ENST00000465229 NKAPP1Q8N9T2 125 aa10.67□□□□□ -0.7
EXOSC3-203ENST00000465229 COX7BP24311 80 aa10.66□□□□□ -0.7
EXOSC3-203ENST00000465229 SERTAD4-AS1Q5TG53 156 aa10.66□□□□□ -0.7
EXOSC3-203ENST00000465229 CIRBP-AS1Q8TBR5 109 aa10.66□□□□□ -0.7
EXOSC3-203ENST00000465229 EPM2AB3EWF7 344 aa10.65□□□□□ -0.7
EXOSC3-203ENST00000465229 SCGB1A1P11684 91 aa10.65□□□□□ -0.7
EXOSC3-203ENST00000465229 SCXQ7RTU7 201 aa10.65□□□□□ -0.7
EXOSC3-203ENST00000465229 KCNQ1DNQ9H478 68 aa10.65□□□□□ -0.7
EXOSC3-203ENST00000465229 PLAC8Q9NZF1 115 aa10.65□□□□□ -0.7
EXOSC3-203ENST00000465229 JMJD7-PLA2G4BH0Y9G9 81 aa10.64□□□□□ -0.71
EXOSC3-203ENST00000465229 HAMPP81172 84 aa10.64□□□□□ -0.71
EXOSC3-203ENST00000465229 FAM19A5Q7Z5A7 132 aaPredicted RBP10.64□□□□□ -0.71
EXOSC3-203ENST00000465229 GHRHP01286 108 aa10.63□□□□□ -0.71
EXOSC3-203ENST00000465229 XGP55808 180 aa10.63□□□□□ -0.71
EXOSC3-203ENST00000465229 C7orf33Q8WU49 177 aa10.62□□□□□ -0.71
EXOSC3-203ENST00000465229 PCP4P48539 62 aa10.62□□□□□ -0.71
EXOSC3-203ENST00000465229 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.62□□□□□ -0.71
EXOSC3-203ENST00000465229 LINC00528Q8N1L1 170 aa10.6□□□□□ -0.71
EXOSC3-203ENST00000465229 MT-ATP8P03928 68 aa10.59□□□□□ -0.71
EXOSC3-203ENST00000465229 PRYO14603 147 aa10.58□□□□□ -0.72
EXOSC3-203ENST00000465229 PHF5AQ7RTV0 110 aaKnown RBP10.58□□□□□ -0.72
EXOSC3-203ENST00000465229 Q6ZQY7 126 aa10.58□□□□□ -0.72
EXOSC3-203ENST00000465229 C14orf132Q9NPU4 83 aa10.58□□□□□ -0.72
EXOSC3-203ENST00000465229 IGLV1-50A0A075B6I6 118 aa10.57□□□□□ -0.72
EXOSC3-203ENST00000465229 CDK2AP2O75956 126 aa10.56□□□□□ -0.72
EXOSC3-203ENST00000465229 MRPL55Q7Z7F7 128 aaKnown RBP10.56□□□□□ -0.72
EXOSC3-203ENST00000465229 HSPG2P98160 4391 aa10.56□□□□□ -0.72
EXOSC3-203ENST00000465229 SPRR1AP35321 89 aa10.55□□□□□ -0.72
EXOSC3-203ENST00000465229 GAGE2AQ6NT46 116 aa10.55□□□□□ -0.72
EXOSC3-203ENST00000465229 KRTAP4-16G5E9R7 235 aaPredicted RBP10.54□□□□□ -0.72
EXOSC3-203ENST00000465229 CCKP06307 115 aa10.53□□□□□ -0.72
EXOSC3-203ENST00000465229 FAT1Q14517 4588 aa10.53□□□□□ -0.72
EXOSC3-203ENST00000465229 KIAA1109Q2LD37 5005 aa10.52□□□□□ -0.72
EXOSC3-203ENST00000465229 KRTAP11-1Q8IUC1 163 aa10.52□□□□□ -0.73
EXOSC3-203ENST00000465229 RPL37AP8A6NKH3 93 aa10.51□□□□□ -0.73
EXOSC3-203ENST00000465229 Q6Q795 121 aa10.51□□□□□ -0.73
EXOSC3-203ENST00000465229 LINC00643Q86TS7 51 aa10.51□□□□□ -0.73
EXOSC3-203ENST00000465229 DHRS4-AS1Q9P1J3 65 aa10.51□□□□□ -0.73
EXOSC3-203ENST00000465229 RBM3P98179 157 aaKnown RBP10.51□□□□□ -0.73
EXOSC3-203ENST00000465229 LOC110117498A0A087WWA1 95 aa10.5□□□□□ -0.73
EXOSC3-203ENST00000465229 B5MCH6 92 aa10.5□□□□□ -0.73
EXOSC3-203ENST00000465229 SMR3BP02814 79 aaPredicted RBP10.5□□□□□ -0.73
EXOSC3-203ENST00000465229 PDE6GP18545 87 aa10.5□□□□□ -0.73
EXOSC3-203ENST00000465229 Q6ZRX8 168 aa10.5□□□□□ -0.73
EXOSC3-203ENST00000465229 LAMTOR3Q9UHA4 124 aa10.5□□□□□ -0.73
EXOSC3-203ENST00000465229 RYR1P21817 5038 aa10.5□□□□□ -0.73
EXOSC3-203ENST00000465229 UBE2BP63146 152 aa10.49□□□□□ -0.73
EXOSC3-203ENST00000465229 BIRC6Q9NR09 4857 aa10.49□□□□□ -0.73
EXOSC3-203ENST00000465229 ETDCA0A1B0GVM5 59 aa10.48□□□□□ -0.73
EXOSC3-203ENST00000465229 C21orf62-AS1Q17RA5 79 aa10.48□□□□□ -0.73
EXOSC3-203ENST00000465229 SMCR5Q8TEV8 140 aa10.48□□□□□ -0.73
EXOSC3-203ENST00000465229 VPS13BQ7Z7G8 4022 aa10.47□□□□□ -0.73
EXOSC3-203ENST00000465229 TRBV7-7A0A0K0K1E9 115 aa10.47□□□□□ -0.73
EXOSC3-203ENST00000465229 Q6ZQT0 140 aa10.46□□□□□ -0.74
EXOSC3-203ENST00000465229 IMUPQ9GZP8 106 aa10.46□□□□□ -0.74
EXOSC3-203ENST00000465229 REG3GQ6UW15 175 aa10.45□□□□□ -0.74
EXOSC3-203ENST00000465229 DSCR8Q96T75 97 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms